FFCP PHASE1:Hg19::chr4:151503383..151503398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10586 | |EntrezGene=10586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6758 | |HGNC=6758 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y586 | |UniProt=Q9Y586 | ||
|association_with_transcript=306bp_to_ENST00000317605,NM_006439,uc003ilw.2_5end | |association_with_transcript=306bp_to_ENST00000317605,NM_006439,uc003ilw.2_5end | ||
|cluster_id=chr4:151503383..151503398,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_3_at_MAB21L2_5end | |description=CAGE_peak_3_at_MAB21L2_5end | ||
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|ontology_enrichment_celltype=CL:0000062!4.61e-12!11;CL:0000375!4.61e-12!11;CL:0000335!4.61e-12!11;CL:0002540!4.84e-09!6;CL:0002586!6.83e-08!3;CL:0002504!1.76e-07!3;CL:1000279!1.76e-07!3;CL:1000280!1.76e-07!3;CL:0002092!4.07e-07!10 | |ontology_enrichment_celltype=CL:0000062!4.61e-12!11;CL:0000375!4.61e-12!11;CL:0000335!4.61e-12!11;CL:0002540!4.84e-09!6;CL:0002586!6.83e-08!3;CL:0002504!1.76e-07!3;CL:1000279!1.76e-07!3;CL:1000280!1.76e-07!3;CL:0002092!4.07e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000062;8.59e-21;9!CL:0002586;5.00e-13;3!CL:0002504;2.97e-12;3!CL:1000279;2.97e-12;3!CL:1000280;2.97e-12;3!CL:0000149;7.07e-10;4 | |ontology_enrichment_celltype_v019=CL:0000062;8.59e-21;9!CL:0002586;5.00e-13;3!CL:0002504;2.97e-12;3!CL:1000279;2.97e-12;3!CL:1000280;2.97e-12;3!CL:0000149;7.07e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.25e-17,11;CL:0000375,6.25e-17,11;CL:0000335,6.25e-17,11;CL:0002586,5.90e-13,3;CL:0002504,3.22e-12,3;CL:1000279,3.22e-12,3;CL:1000280,3.22e-12,3;CL:0000149,7.99e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000335;7.84e-17;11 | |ontology_enrichment_development_v019=CL:0000335;7.84e-17;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.48e-12!11;UBERON:0001155!9.20e-12!9;UBERON:0007625!2.33e-11!11;UBERON:0003076!2.35e-09!15;UBERON:0003057!2.35e-09!15;UBERON:0000160!3.62e-09!27;UBERON:0000970!5.91e-09!20;UBERON:0002298!1.36e-08!8;UBERON:0001456!1.78e-08!21;UBERON:0002104!2.01e-08!21;UBERON:0001781!6.83e-08!3;UBERON:0001782!6.83e-08!3;UBERON:0005424!6.83e-08!3;UBERON:0000966!7.27e-08!5;UBERON:0005388!7.27e-08!5;UBERON:0001802!7.27e-08!5;UBERON:0001444!1.26e-07!48;UBERON:0000019!1.36e-07!19;UBERON:0000047!1.36e-07!19;UBERON:0004088!1.36e-07!19;UBERON:0003072!1.36e-07!19;UBERON:0003071!1.36e-07!19;UBERON:0004128!1.36e-07!19;UBERON:0000020!1.68e-07!23;UBERON:0001032!4.25e-07!24;UBERON:0004456!4.25e-07!24;UBERON:0000988!7.40e-07!3;UBERON:0002240!8.72e-07!3 | |ontology_enrichment_uberon=UBERON:0000059!2.48e-12!11;UBERON:0001155!9.20e-12!9;UBERON:0007625!2.33e-11!11;UBERON:0003076!2.35e-09!15;UBERON:0003057!2.35e-09!15;UBERON:0000160!3.62e-09!27;UBERON:0000970!5.91e-09!20;UBERON:0002298!1.36e-08!8;UBERON:0001456!1.78e-08!21;UBERON:0002104!2.01e-08!21;UBERON:0001781!6.83e-08!3;UBERON:0001782!6.83e-08!3;UBERON:0005424!6.83e-08!3;UBERON:0000966!7.27e-08!5;UBERON:0005388!7.27e-08!5;UBERON:0001802!7.27e-08!5;UBERON:0001444!1.26e-07!48;UBERON:0000019!1.36e-07!19;UBERON:0000047!1.36e-07!19;UBERON:0004088!1.36e-07!19;UBERON:0003072!1.36e-07!19;UBERON:0003071!1.36e-07!19;UBERON:0004128!1.36e-07!19;UBERON:0000020!1.68e-07!23;UBERON:0001032!4.25e-07!24;UBERON:0004456!4.25e-07!24;UBERON:0000988!7.40e-07!3;UBERON:0002240!8.72e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.28e-29;17!UBERON:0005409;2.81e-22;22!UBERON:0000059;7.46e-22;11!UBERON:0001155;1.39e-20;9!UBERON:0004921;1.32e-13;33!UBERON:0000966;4.06e-13;5!UBERON:0005388;4.06e-13;5!UBERON:0001802;4.06e-13;5!UBERON:0001781;5.00e-13;3!UBERON:0001782;5.00e-13;3!UBERON:0007625;8.32e-09;11!UBERON:0000970;1.01e-08;20!UBERON:0001456;2.40e-08;21!UBERON:0002104;2.94e-08;21!UBERON:0001555;3.45e-08;54!UBERON:0002108;1.29e-07;4!UBERON:0000020;1.87e-07;23!UBERON:0001474;2.85e-07;18!UBERON:0001032;4.19e-07;24!UBERON:0004456;4.19e-07;24!UBERON:0001434;6.56e-07;36!UBERON:0000019;7.54e-07;19!UBERON:0000047;7.54e-07;19!UBERON:0004088;7.54e-07;19!UBERON:0010230;7.54e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000160;3.28e-29;17!UBERON:0005409;2.81e-22;22!UBERON:0000059;7.46e-22;11!UBERON:0001155;1.39e-20;9!UBERON:0004921;1.32e-13;33!UBERON:0000966;4.06e-13;5!UBERON:0005388;4.06e-13;5!UBERON:0001802;4.06e-13;5!UBERON:0001781;5.00e-13;3!UBERON:0001782;5.00e-13;3!UBERON:0007625;8.32e-09;11!UBERON:0000970;1.01e-08;20!UBERON:0001456;2.40e-08;21!UBERON:0002104;2.94e-08;21!UBERON:0001555;3.45e-08;54!UBERON:0002108;1.29e-07;4!UBERON:0000020;1.87e-07;23!UBERON:0001474;2.85e-07;18!UBERON:0001032;4.19e-07;24!UBERON:0004456;4.19e-07;24!UBERON:0001434;6.56e-07;36!UBERON:0000019;7.54e-07;19!UBERON:0000047;7.54e-07;19!UBERON:0004088;7.54e-07;19!UBERON:0010230;7.54e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.82e-29,17;UBERON:0000059,8.29e-22,11;UBERON:0001155,1.55e-20,9;UBERON:0005409,2.35e-19,25;UBERON:0001782,5.90e-13,3;UBERON:0005424,5.90e-13,3;UBERON:0000966,4.90e-11,6;UBERON:0005388,4.90e-11,6;UBERON:0001802,4.90e-11,6;UBERON:0001781,7.99e-10,4;UBERON:0007625,8.93e-09,11;UBERON:0000970,2.54e-08,21;UBERON:0002104,2.54e-08,21;UBERON:0001456,5.75e-08,22;UBERON:0002108,1.36e-07,4;UBERON:0001444,1.63e-07,49;UBERON:0000020,3.70e-07,24;UBERON:0001032,3.70e-07,24;UBERON:0004456,3.70e-07,24 | |||
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|short_description=p3@MAB21L2 | |short_description=p3@MAB21L2 | ||
}} | }} |
Latest revision as of 01:45, 16 September 2015
Short description: | p3@MAB21L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAB21L2_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 306bp_to_ENST00000317605, NM_006439, uc003ilw.2_5end |
EntrezGene: | MAB21L2 |
HGNC: | 6758 |
UniProt: | Q9Y586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.25e-17 | 11 |
osteoprogenitor cell | 6.25e-17 | 11 |
mesenchyme condensation cell | 6.25e-17 | 11 |
retinal pigment epithelial cell | 5.90e-13 | 3 |
enteric smooth muscle cell | 3.22e-12 | 3 |
smooth muscle cell of large intestine | 3.22e-12 | 3 |
smooth muscle cell of colon | 3.22e-12 | 3 |
visual pigment cell | 7.99e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.82e-29 | 17 |
large intestine | 8.29e-22 | 11 |
colon | 1.55e-20 | 9 |
gastrointestinal system | 2.35e-19 | 25 |
pigmented layer of retina | 5.90e-13 | 3 |
presumptive retinal pigmented epithelium | 5.90e-13 | 3 |
retina | 4.90e-11 | 6 |
photoreceptor array | 4.90e-11 | 6 |
posterior segment of eyeball | 4.90e-11 | 6 |
layer of retina | 7.99e-10 | 4 |
pigment epithelium of eye | 8.93e-09 | 11 |
eye | 2.54e-08 | 21 |
visual system | 2.54e-08 | 21 |
face | 5.75e-08 | 22 |
small intestine | 1.36e-07 | 4 |
subdivision of head | 1.63e-07 | 49 |
sense organ | 3.70e-07 | 24 |
sensory system | 3.70e-07 | 24 |
entire sense organ system | 3.70e-07 | 24 |