FFCP PHASE1:Hg19::chr21:27284138..27284164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:27284138..27284164,- | |||
|coexpression_cluster_id=C2629 | |coexpression_cluster_id=C2629 | ||
|description=CAGE_peak_at_chr21:27284138..27284164,- | |description=CAGE_peak_at_chr21:27284138..27284164,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.26e-16;6!CL:0002139;1.20e-08;24 | |ontology_enrichment_celltype_v019=CL:0002138;1.26e-16;6!CL:0002139;1.20e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.43e-16,6;CL:0002138,1.43e-16,6;CL:0005022,1.43e-16,6;CL:0002139,1.11e-08,24;CL:0000115,1.90e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.26e-16;6!UBERON:0007297;4.39e-13;2!UBERON:0006241;6.07e-09;3!UBERON:0003057;6.07e-09;3!UBERON:0005754;1.27e-07;1!UBERON:0006222;1.63e-07;1!UBERON:0005425;1.63e-07;1 | |ontology_enrichment_development_v019=CL:0005022;1.26e-16;6!UBERON:0007297;4.39e-13;2!UBERON:0006241;6.07e-09;3!UBERON:0003057;6.07e-09;3!UBERON:0005754;1.27e-07;1!UBERON:0006222;1.63e-07;1!UBERON:0005425;1.63e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-11!57;UBERON:0005068!1.92e-11!57;UBERON:0006241!1.92e-11!57;UBERON:0007135!1.92e-11!57;UBERON:0007023!6.13e-10!115;UBERON:0002346!1.63e-09!90;UBERON:0002616!2.06e-09!59;UBERON:0000468!2.91e-09!659;UBERON:0000477!6.54e-09!286;UBERON:0002780!6.98e-09!41;UBERON:0001890!6.98e-09!41;UBERON:0006240!6.98e-09!41;UBERON:0003075!9.48e-09!86;UBERON:0007284!9.48e-09!86;UBERON:0000924!9.96e-09!173;UBERON:0006601!9.96e-09!173;UBERON:0000922!1.00e-08!612;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0001893!1.34e-08!34;UBERON:0004111!1.45e-08!241;UBERON:0003080!2.16e-08!42;UBERON:0002791!3.99e-08!33;UBERON:0004121!4.42e-08!169;UBERON:0001017!6.05e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0005743!9.35e-08!86;UBERON:0001869!9.93e-08!32;UBERON:0000033!1.58e-07!123;UBERON:0000923!1.77e-07!604;UBERON:0005291!1.77e-07!604;UBERON:0006598!1.77e-07!604;UBERON:0002532!1.77e-07!604;UBERON:0002050!2.38e-07!605;UBERON:0005423!2.38e-07!605;UBERON:0000955!2.77e-07!69;UBERON:0006238!2.77e-07!69;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0000467!3.35e-07!625;UBERON:0000480!4.50e-07!626;UBERON:0000481!7.32e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!1.92e-11!57;UBERON:0005068!1.92e-11!57;UBERON:0006241!1.92e-11!57;UBERON:0007135!1.92e-11!57;UBERON:0007023!6.13e-10!115;UBERON:0002346!1.63e-09!90;UBERON:0002616!2.06e-09!59;UBERON:0000468!2.91e-09!659;UBERON:0000477!6.54e-09!286;UBERON:0002780!6.98e-09!41;UBERON:0001890!6.98e-09!41;UBERON:0006240!6.98e-09!41;UBERON:0003075!9.48e-09!86;UBERON:0007284!9.48e-09!86;UBERON:0000924!9.96e-09!173;UBERON:0006601!9.96e-09!173;UBERON:0000922!1.00e-08!612;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0001893!1.34e-08!34;UBERON:0004111!1.45e-08!241;UBERON:0003080!2.16e-08!42;UBERON:0002791!3.99e-08!33;UBERON:0004121!4.42e-08!169;UBERON:0001017!6.05e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0005743!9.35e-08!86;UBERON:0001869!9.93e-08!32;UBERON:0000033!1.58e-07!123;UBERON:0000923!1.77e-07!604;UBERON:0005291!1.77e-07!604;UBERON:0006598!1.77e-07!604;UBERON:0002532!1.77e-07!604;UBERON:0002050!2.38e-07!605;UBERON:0005423!2.38e-07!605;UBERON:0000955!2.77e-07!69;UBERON:0006238!2.77e-07!69;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0000467!3.35e-07!625;UBERON:0000480!4.50e-07!626;UBERON:0000481!7.32e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.67e-12;8!UBERON:0004536;1.67e-12;8!UBERON:0006558;1.67e-12;8!UBERON:0002021;4.78e-11;5!UBERON:0002465;5.05e-10;10!UBERON:0006947;5.18e-09;3!UBERON:0004054;5.18e-09;3!UBERON:0002240;6.07e-09;3!UBERON:0005174;6.07e-09;3!UBERON:0001137;6.07e-09;3!UBERON:0000998;1.27e-07;1!UBERON:0006868;1.27e-07;1!UBERON:0000941;1.63e-07;1!UBERON:0001785;1.63e-07;1!UBERON:0002464;1.63e-07;1!UBERON:0004904;1.63e-07;1!UBERON:0001021;1.63e-07;1!UBERON:0002135;3.84e-07;1!UBERON:0001301;3.84e-07;1!UBERON:0005904;5.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.67e-12;8!UBERON:0004536;1.67e-12;8!UBERON:0006558;1.67e-12;8!UBERON:0002021;4.78e-11;5!UBERON:0002465;5.05e-10;10!UBERON:0006947;5.18e-09;3!UBERON:0004054;5.18e-09;3!UBERON:0002240;6.07e-09;3!UBERON:0005174;6.07e-09;3!UBERON:0001137;6.07e-09;3!UBERON:0000998;1.27e-07;1!UBERON:0006868;1.27e-07;1!UBERON:0000941;1.63e-07;1!UBERON:0001785;1.63e-07;1!UBERON:0002464;1.63e-07;1!UBERON:0004904;1.63e-07;1!UBERON:0001021;1.63e-07;1!UBERON:0002135;3.84e-07;1!UBERON:0001301;3.84e-07;1!UBERON:0005904;5.85e-07;4 | ||
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| ||
|short_description=p@chr21:27284138..27284164,- | |short_description=p@chr21:27284138..27284164,- | ||
}} | }} |
Latest revision as of 17:01, 28 July 2015
Short description: | p@chr21:27284138..27284164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:27284138..27284164, - |
Coexpression cluster: | C2629_Endothelial_adult_corpus_thalamus_optic_pons_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.43e-16 | 6 |
endothelial cell of lymphatic vessel | 1.43e-16 | 6 |
vascular lymphangioblast | 1.43e-16 | 6 |
endothelial cell of vascular tree | 1.11e-08 | 24 |
endothelial cell | 1.90e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.83e-12 | 8 |
lymph vasculature | 1.83e-12 | 8 |
lymphatic part of lymphoid system | 1.83e-12 | 8 |
occipital lobe | 8.05e-11 | 5 |
lymphoid system | 5.43e-10 | 10 |
spinal cord | 5.40e-09 | 3 |
dorsal region element | 5.40e-09 | 3 |
dorsum | 5.40e-09 | 3 |
male genital duct | 7.42e-09 | 3 |
internal male genitalia | 7.42e-09 | 3 |
neural tube | 1.26e-08 | 56 |
neural rod | 1.26e-08 | 56 |
future spinal cord | 1.26e-08 | 56 |
neural keel | 1.26e-08 | 56 |
ecto-epithelium | 3.56e-08 | 104 |
neural plate | 5.88e-08 | 82 |
presumptive neural plate | 5.88e-08 | 82 |
seminal vesicle | 1.36e-07 | 1 |
seminal fluid secreting gland | 1.36e-07 | 1 |
cranial nerve II | 1.44e-07 | 1 |
cranial nerve | 1.44e-07 | 1 |
nerve trunk | 1.44e-07 | 1 |
nerve connecting eye with brain | 1.44e-07 | 1 |
nerve | 1.44e-07 | 1 |
retinal neural layer | 1.44e-07 | 1 |
presumptive neural retina | 1.44e-07 | 1 |
neurectoderm | 1.73e-07 | 86 |
anatomical conduit | 2.13e-07 | 240 |
mitral valve | 4.89e-07 | 1 |
nervous system | 5.65e-07 | 89 |
epididymis | 6.20e-07 | 1 |
duct of male reproductive system | 7.64e-07 | 4 |