FFCP PHASE1:Hg19::chr4:175309496..175309506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:175309496..175309506,+ | |||
|coexpression_cluster_id=C311 | |coexpression_cluster_id=C311 | ||
|description=CAGE_peak_at_chr4:175309496..175309506,+ | |description=CAGE_peak_at_chr4:175309496..175309506,+ | ||
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|ontology_enrichment_celltype=CL:1000415!8.69e-10!2;CL:0002097!1.44e-09!2;CL:0002231!7.70e-07!3;CL:0000174!8.62e-07!3 | |ontology_enrichment_celltype=CL:1000415!8.69e-10!2;CL:0002097!1.44e-09!2;CL:0002231!7.70e-07!3;CL:0000174!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.04e-34;2 | |ontology_enrichment_celltype_v019=CL:1000415;5.04e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.04e-34,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!2.89e-09!8 | |ontology_enrichment_disease=DOID:1036!2.89e-09!8 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006834!1.03e-17!1;UBERON:0000002!6.00e-12!6;UBERON:0001560!6.00e-12!6;UBERON:0000995!1.17e-07!21;UBERON:0005795!2.47e-07!22;UBERON:0003975!2.47e-07!22;UBERON:0005156!5.33e-07!59;UBERON:0000990!5.33e-07!59;UBERON:0002110!6.14e-07!3;UBERON:0006242!6.14e-07!3;UBERON:0002369!8.62e-07!3;UBERON:0001235!8.62e-07!3;UBERON:0006858!8.62e-07!3 | |ontology_enrichment_uberon=UBERON:0006834!1.03e-17!1;UBERON:0000002!6.00e-12!6;UBERON:0001560!6.00e-12!6;UBERON:0000995!1.17e-07!21;UBERON:0005795!2.47e-07!22;UBERON:0003975!2.47e-07!22;UBERON:0005156!5.33e-07!59;UBERON:0000990!5.33e-07!59;UBERON:0002110!6.14e-07!3;UBERON:0006242!6.14e-07!3;UBERON:0002369!8.62e-07!3;UBERON:0001235!8.62e-07!3;UBERON:0006858!8.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.27e-23;3!UBERON:0001052;7.35e-18;4!UBERON:0004907;1.40e-14;5!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000059;2.32e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0002110;3.27e-23;3!UBERON:0001052;7.35e-18;4!UBERON:0004907;1.40e-14;5!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000059;2.32e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,3.27e-23,3;UBERON:0006242,3.27e-23,3;UBERON:0001052,7.35e-18,4;UBERON:0004907,1.40e-14,5;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9;UBERON:0000059,2.32e-07,11 | |||
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|short_description=p@chr4:175309496..175309506,+ | |short_description=p@chr4:175309496..175309506,+ | ||
}} | }} |
Latest revision as of 03:29, 30 July 2015
Short description: | p@chr4:175309496..175309506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:175309496..175309506, + |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.04e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 3.27e-23 | 3 |
gall bladder primordium | 3.27e-23 | 3 |
rectum | 7.35e-18 | 4 |
lower digestive tract | 1.40e-14 | 5 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
large intestine | 2.32e-07 | 11 |