FFCP PHASE1:Hg19::chr4:90757235..90757246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6622 | |EntrezGene=6622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |HGNC=11138 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPV7 | |UniProt=E7EPV7 | ||
|association_with_transcript=-389bp_to_ENST00000502987_5end | |association_with_transcript=-389bp_to_ENST00000502987_5end | ||
|cluster_id=chr4:90757235..90757246,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_14_at_SNCA_5end | |description=CAGE_peak_14_at_SNCA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!1.63e-11!2;CL:0000765!1.63e-11!2;CL:0000050!1.63e-11!2;CL:0000038!1.63e-11!2;CL:0000558!1.63e-11!2;CL:0000547!1.63e-11!2;CL:0000549!1.63e-11!2;CL:0000550!1.63e-11!2;CL:0000552!1.63e-11!2 | |ontology_enrichment_celltype=CL:0000764!1.63e-11!2;CL:0000765!1.63e-11!2;CL:0000050!1.63e-11!2;CL:0000038!1.63e-11!2;CL:0000558!1.63e-11!2;CL:0000547!1.63e-11!2;CL:0000549!1.63e-11!2;CL:0000550!1.63e-11!2;CL:0000552!1.63e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.13e-34;2!CL:0000558;9.13e-34;2 | |ontology_enrichment_celltype_v019=CL:0000764;9.13e-34;2!CL:0000558;9.13e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.39e-34,2;CL:0000765,8.39e-34,2;CL:0000050,8.39e-34,2;CL:0000038,8.39e-34,2;CL:0000558,8.39e-34,2;CL:0000547,8.39e-34,2;CL:0000549,8.39e-34,2;CL:0000550,8.39e-34,2;CL:0000552,8.39e-34,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.73e-27!15;UBERON:0000179!5.73e-27!15;UBERON:0000463!5.73e-27!15;UBERON:0007023!8.68e-18!115;UBERON:0001870!6.11e-11!2;UBERON:0002360!1.64e-10!2;UBERON:0000094!1.64e-10!2;UBERON:0007645!1.64e-10!2 | |ontology_enrichment_uberon=UBERON:0000178!5.73e-27!15;UBERON:0000179!5.73e-27!15;UBERON:0000463!5.73e-27!15;UBERON:0007023!8.68e-18!115;UBERON:0001870!6.11e-11!2;UBERON:0002360!1.64e-10!2;UBERON:0000094!1.64e-10!2;UBERON:0007645!1.64e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.42e-88;15!UBERON:0000179;3.42e-88;15!UBERON:0000463;3.42e-88;15!UBERON:0002390;1.24e-37;32!UBERON:0002193;6.30e-21;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.42e-88;15!UBERON:0000179;3.42e-88;15!UBERON:0000463;3.42e-88;15!UBERON:0002390;1.24e-37;32!UBERON:0002193;6.30e-21;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.25e-88,15;UBERON:0000179,3.25e-88,15;UBERON:0000463,3.25e-88,15;UBERON:0007023,9.42e-17,114;UBERON:0002390,6.66e-13,98;UBERON:0003061,6.66e-13,98;UBERON:0004535,1.18e-11,109;UBERON:0002193,1.18e-11,108;UBERON:0001009,2.54e-11,112 | |||
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|short_description=p14@SNCA | |short_description=p14@SNCA | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p14@SNCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -389bp_to_ENST00000502987_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | E7EPV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.39e-34 | 2 |
erythroblast | 8.39e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 8.39e-34 | 2 |
erythroid progenitor cell | 8.39e-34 | 2 |
reticulocyte | 8.39e-34 | 2 |
proerythroblast | 8.39e-34 | 2 |
basophilic erythroblast | 8.39e-34 | 2 |
polychromatophilic erythroblast | 8.39e-34 | 2 |
orthochromatic erythroblast | 8.39e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.25e-88 | 15 |
haemolymphatic fluid | 3.25e-88 | 15 |
organism substance | 3.25e-88 | 15 |
adult organism | 9.42e-17 | 114 |
hematopoietic system | 6.66e-13 | 98 |
blood island | 6.66e-13 | 98 |
cardiovascular system | 1.18e-11 | 109 |
hemolymphoid system | 1.18e-11 | 108 |
circulatory system | 2.54e-11 | 112 |