FFCP PHASE1:Hg19::chr22:19707336..19707355,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5413 | |EntrezGene=5413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9164 | |HGNC=9164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-355bp_to_ENST00000413258_5end | |association_with_transcript=-355bp_to_ENST00000413258_5end | ||
|cluster_id=chr22:19707336..19707355,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_8_at_SEPT5_5end | |description=CAGE_peak_8_at_SEPT5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.47e-07;6!CL:0000404;1.47e-07;6 | |ontology_enrichment_celltype_v019=CL:0000540;1.47e-07;6!CL:0000404;1.47e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-07,6;CL:0000031,1.52e-07,6;CL:0000404,1.52e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.67e-11;1!CL:0000031;1.47e-07;6!UBERON:0006601;7.09e-07;82 | |ontology_enrichment_development_v019=UBERON:0006222;2.67e-11;1!CL:0000031;1.47e-07;6!UBERON:0006601;7.09e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-24!82;UBERON:0005743!1.12e-23!86;UBERON:0000073!9.91e-23!94;UBERON:0001016!9.91e-23!94;UBERON:0001869!1.10e-22!32;UBERON:0001893!3.02e-22!34;UBERON:0002780!5.38e-22!41;UBERON:0001890!5.38e-22!41;UBERON:0006240!5.38e-22!41;UBERON:0002791!2.11e-21!33;UBERON:0001049!2.29e-21!57;UBERON:0005068!2.29e-21!57;UBERON:0006241!2.29e-21!57;UBERON:0007135!2.29e-21!57;UBERON:0003080!3.16e-21!42;UBERON:0001950!4.40e-21!20;UBERON:0002619!6.92e-21!22;UBERON:0002020!1.28e-20!34;UBERON:0003528!1.28e-20!34;UBERON:0000955!1.33e-19!69;UBERON:0006238!1.33e-19!69;UBERON:0000956!2.99e-19!25;UBERON:0000203!2.99e-19!25;UBERON:0002616!5.24e-19!59;UBERON:0002346!6.44e-17!90;UBERON:0000924!1.49e-16!173;UBERON:0006601!1.49e-16!173;UBERON:0007023!5.70e-16!115;UBERON:0000033!2.17e-14!123;UBERON:0004121!2.93e-14!169;UBERON:0003075!4.15e-14!86;UBERON:0007284!4.15e-14!86;UBERON:0000153!1.02e-13!129;UBERON:0007811!1.02e-13!129;UBERON:0003056!3.55e-13!61;UBERON:0001871!5.16e-09!7;UBERON:0000200!1.48e-08!6;UBERON:0002021!1.58e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!1.31e-24!82;UBERON:0005743!1.12e-23!86;UBERON:0000073!9.91e-23!94;UBERON:0001016!9.91e-23!94;UBERON:0001869!1.10e-22!32;UBERON:0001893!3.02e-22!34;UBERON:0002780!5.38e-22!41;UBERON:0001890!5.38e-22!41;UBERON:0006240!5.38e-22!41;UBERON:0002791!2.11e-21!33;UBERON:0001049!2.29e-21!57;UBERON:0005068!2.29e-21!57;UBERON:0006241!2.29e-21!57;UBERON:0007135!2.29e-21!57;UBERON:0003080!3.16e-21!42;UBERON:0001950!4.40e-21!20;UBERON:0002619!6.92e-21!22;UBERON:0002020!1.28e-20!34;UBERON:0003528!1.28e-20!34;UBERON:0000955!1.33e-19!69;UBERON:0006238!1.33e-19!69;UBERON:0000956!2.99e-19!25;UBERON:0000203!2.99e-19!25;UBERON:0002616!5.24e-19!59;UBERON:0002346!6.44e-17!90;UBERON:0000924!1.49e-16!173;UBERON:0006601!1.49e-16!173;UBERON:0007023!5.70e-16!115;UBERON:0000033!2.17e-14!123;UBERON:0004121!2.93e-14!169;UBERON:0003075!4.15e-14!86;UBERON:0007284!4.15e-14!86;UBERON:0000153!1.02e-13!129;UBERON:0007811!1.02e-13!129;UBERON:0003056!3.55e-13!61;UBERON:0001871!5.16e-09!7;UBERON:0000200!1.48e-08!6;UBERON:0002021!1.58e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.48e-37;20!UBERON:0001871;1.29e-35;6!UBERON:0002619;5.40e-34;22!UBERON:0000956;5.98e-30;25!UBERON:0000203;5.98e-30;25!UBERON:0002791;1.27e-29;32!UBERON:0001869;2.19e-28;32!UBERON:0001893;3.68e-25;34!UBERON:0003528;4.26e-24;34!UBERON:0002020;4.26e-24;34!UBERON:0001876;7.76e-21;2!UBERON:0002780;3.71e-19;41!UBERON:0001890;3.71e-19;41!UBERON:0002021;1.76e-18;5!UBERON:0000073;4.54e-12;53!UBERON:0002616;4.54e-12;53!UBERON:0001017;5.29e-12;75!UBERON:0000955;8.14e-12;68!UBERON:0001874;1.01e-11;1!UBERON:0003112;2.67e-11;1!UBERON:0011158;2.67e-11;1!UBERON:0003128;2.67e-11;1!UBERON:0001703;2.67e-11;1!UBERON:0002241;2.67e-11;1!UBERON:0002420;1.15e-10;9!UBERON:0007245;1.15e-10;9!UBERON:0010009;1.15e-10;9!UBERON:0010011;1.15e-10;9!UBERON:0000454;1.15e-10;9!UBERON:0000349;6.69e-09;5!UBERON:0000200;7.43e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.48e-37;20!UBERON:0001871;1.29e-35;6!UBERON:0002619;5.40e-34;22!UBERON:0000956;5.98e-30;25!UBERON:0000203;5.98e-30;25!UBERON:0002791;1.27e-29;32!UBERON:0001869;2.19e-28;32!UBERON:0001893;3.68e-25;34!UBERON:0003528;4.26e-24;34!UBERON:0002020;4.26e-24;34!UBERON:0001876;7.76e-21;2!UBERON:0002780;3.71e-19;41!UBERON:0001890;3.71e-19;41!UBERON:0002021;1.76e-18;5!UBERON:0000073;4.54e-12;53!UBERON:0002616;4.54e-12;53!UBERON:0001017;5.29e-12;75!UBERON:0000955;8.14e-12;68!UBERON:0001874;1.01e-11;1!UBERON:0003112;2.67e-11;1!UBERON:0011158;2.67e-11;1!UBERON:0003128;2.67e-11;1!UBERON:0001703;2.67e-11;1!UBERON:0002241;2.67e-11;1!UBERON:0002420;1.15e-10;9!UBERON:0007245;1.15e-10;9!UBERON:0010009;1.15e-10;9!UBERON:0010011;1.15e-10;9!UBERON:0000454;1.15e-10;9!UBERON:0000349;6.69e-09;5!UBERON:0000200;7.43e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.45e-37,20;UBERON:0001871,1.21e-35,6;UBERON:0002619,5.33e-34,22;UBERON:0000956,5.92e-30,25;UBERON:0000203,5.92e-30,25;UBERON:0002791,5.83e-29,32;UBERON:0001869,5.83e-29,32;UBERON:0003528,3.13e-27,34;UBERON:0002020,3.13e-27,34;UBERON:0001893,3.13e-27,34;UBERON:0002780,3.54e-27,41;UBERON:0001890,3.54e-27,41;UBERON:0003080,3.54e-27,41;UBERON:0006240,3.54e-27,41;UBERON:0001017,7.95e-25,81;UBERON:0001016,3.52e-22,89;UBERON:0001876,7.05e-21,2;UBERON:0000073,8.61e-21,53;UBERON:0002616,8.61e-21,53;UBERON:0001049,1.30e-19,56;UBERON:0005068,1.30e-19,56;UBERON:0006241,1.30e-19,56;UBERON:0007135,1.30e-19,56;UBERON:0000955,8.47e-19,68;UBERON:0006238,8.47e-19,68;UBERON:0002021,1.88e-18,5;UBERON:0003056,6.64e-18,61;UBERON:0004121,4.88e-16,171;UBERON:0000924,4.88e-16,171;UBERON:0006601,4.88e-16,171;UBERON:0007023,5.67e-15,114;UBERON:0002346,9.89e-15,86;UBERON:0003075,5.78e-13,82;UBERON:0007284,5.78e-13,82;UBERON:0010371,6.41e-12,104;UBERON:0001874,1.06e-11,1;UBERON:0003112,1.78e-11,1;UBERON:0011158,1.78e-11,1;UBERON:0003128,1.78e-11,1;UBERON:0001703,1.78e-11,1;UBERON:0002241,1.78e-11,1;UBERON:0004761,1.78e-11,1;UBERON:0009617,1.78e-11,1;UBERON:0010314,1.12e-10,132;UBERON:0002420,1.14e-10,9;UBERON:0007245,1.14e-10,9;UBERON:0010009,1.14e-10,9;UBERON:0010011,1.14e-10,9;UBERON:0000454,1.14e-10,9;UBERON:0011216,3.43e-10,223;UBERON:0000349,6.44e-09,5;UBERON:0000200,7.32e-08,6 | |||
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|short_description=p8@SEPT5 | |short_description=p8@SEPT5 | ||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p8@SEPT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SEPT5_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -355bp_to_ENST00000413258_5end |
EntrezGene: | SEPT5 |
HGNC: | 9164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.52e-07 | 6 |
neuroblast | 1.52e-07 | 6 |
electrically signaling cell | 1.52e-07 | 6 |