FFCP PHASE1:Hg19::chr21:46424426..46424445,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:46424426..46424445,-
|short_description=p2@LINC00162
|description=CAGE_peak_2_at_LINC00162_5end
|association_with_transcript=196bp_to_ENST00000422199,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=378825 | |EntrezGene=378825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19725 | |HGNC=19725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=196bp_to_ENST00000422199,NR_024089,uc002zgo.2_5end | |||
|cluster_id=chr21:46424426..46424445,- | |||
|coexpression_cluster_id=C2636 | |||
|description=CAGE_peak_2_at_LINC00162_5end | |||
|id=chr21:46424426..46424445,- | |||
|ontology_enrichment_celltype=CL:0002150!1.72e-08!3;CL:0000861!1.72e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.46e-08;19!CL:0002541;5.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.46e-08,19;CL:0000066,1.55e-08,253;CL:0002541,6.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.77e-12;29 | |||
|ontology_enrichment_disease=DOID:162!9.69e-09!235;DOID:14566!2.44e-08!239;DOID:305!4.44e-08!106;DOID:0050687!1.28e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.20e-14,235;DOID:14566,2.22e-13,239;DOID:305,6.50e-12,106;DOID:0050687,4.07e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.48e-23!9;UBERON:0002298!6.82e-13!8;UBERON:0001557!2.85e-12!19;UBERON:0008947!1.13e-09!38;UBERON:0003258!1.13e-09!38;UBERON:0001049!9.53e-09!57;UBERON:0005068!9.53e-09!57;UBERON:0006241!9.53e-09!57;UBERON:0007135!9.53e-09!57;UBERON:0001896!1.82e-07!3;UBERON:0005290!1.82e-07!3;UBERON:0010096!1.82e-07!3;UBERON:0006331!2.93e-07!3;UBERON:0000988!3.06e-07!3;UBERON:0002616!3.10e-07!59;UBERON:0001041!3.35e-07!98;UBERON:0000955!3.66e-07!69;UBERON:0006238!3.66e-07!69;UBERON:0000065!5.33e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.39e-44;9!UBERON:0001557;6.39e-44;9!UBERON:0000072;5.15e-09;37!UBERON:0000065;1.25e-07;44!UBERON:0003124;5.64e-07;3!UBERON:0000920;5.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.56e-44,9;UBERON:0001557,3.00e-24,19;UBERON:0008947,3.96e-09,38;UBERON:0003258,3.96e-09,38;UBERON:0000072,1.22e-08,47;UBERON:0000065,2.82e-07,54;UBERON:0000920,6.09e-07,3 | |||
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| ||
|short_description=p2@LINC00162 | |||
}} | }} |
Latest revision as of 20:21, 18 September 2015
Short description: | p2@LINC00162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00162_5end |
Coexpression cluster: | C2636_Hep2_Mammary_cervical_mesenchymal_mesothelioma_giant_pagetoid |
Association with transcript: | 196bp_to_ENST00000422199, NR_024089, uc002zgo.2_5end |
EntrezGene: | LINC00162 |
HGNC: | 19725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.46e-08 | 19 |
epithelial cell | 1.55e-08 | 253 |
chorionic membrane mesenchymal stem cell | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.56e-44 | 9 |
upper respiratory tract | 3.00e-24 | 19 |
respiratory primordium | 3.96e-09 | 38 |
endoderm of foregut | 3.96e-09 | 38 |
segment of respiratory tract | 1.22e-08 | 47 |
respiratory tract | 2.82e-07 | 54 |
egg chorion | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.20e-14 | 235 |
disease of cellular proliferation | 2.22e-13 | 239 |
carcinoma | 6.50e-12 | 106 |
cell type cancer | 4.07e-11 | 143 |