FFCP PHASE1:Hg19::chr14:23451797..23451814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IF1 | |UniProt=Q96IF1 | ||
|association_with_transcript=33bp_to_NM_032876,uc001whz.2_5end | |association_with_transcript=33bp_to_NM_032876,uc001whz.2_5end | ||
|cluster_id=chr14:23451797..23451814,- | |||
|coexpression_cluster_id=C1716 | |coexpression_cluster_id=C1716 | ||
|description=CAGE_peak_3_at_AJUBA_5end | |description=CAGE_peak_3_at_AJUBA_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.18e-43!254;CL:0002321!1.41e-26!248;CL:0000220!2.84e-26!246;CL:0000223!4.89e-15!59;CL:0000548!2.27e-14!679;CL:0000004!2.27e-14!679;CL:0000255!2.27e-14!679;CL:0000076!4.40e-14!62;CL:0000012!9.55e-14!682;CL:0002076!1.56e-13!43;CL:0000222!2.06e-09!119;CL:0000055!1.94e-08!180;CL:0000213!2.27e-08!57;CL:0000215!2.27e-08!57;CL:0002368!8.46e-08!13;CL:0002251!1.68e-07!21;CL:0000063!8.35e-07!578;CL:0000057!9.25e-07!75 | |ontology_enrichment_celltype=CL:0000066!1.18e-43!254;CL:0002321!1.41e-26!248;CL:0000220!2.84e-26!246;CL:0000223!4.89e-15!59;CL:0000548!2.27e-14!679;CL:0000004!2.27e-14!679;CL:0000255!2.27e-14!679;CL:0000076!4.40e-14!62;CL:0000012!9.55e-14!682;CL:0002076!1.56e-13!43;CL:0000222!2.06e-09!119;CL:0000055!1.94e-08!180;CL:0000213!2.27e-08!57;CL:0000215!2.27e-08!57;CL:0002368!8.46e-08!13;CL:0002251!1.68e-07!21;CL:0000063!8.35e-07!578;CL:0000057!9.25e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.32e-11;42!CL:0002368;3.61e-08;13!CL:0002251;5.31e-08;20!CL:0000076;7.77e-07;63 | |ontology_enrichment_celltype_v019=CL:0002076;3.32e-11;42!CL:0002368;3.61e-08;13!CL:0002251;5.31e-08;20!CL:0000076;7.77e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.64e-45,253;CL:0002321,1.18e-27,250;CL:0000223,7.63e-16,58;CL:0000076,1.27e-14,63;CL:0002076,3.33e-14,42;CL:0000213,2.22e-09,58;CL:0000215,2.22e-09,58;CL:0000222,2.81e-09,121;CL:0002368,2.58e-08,13;CL:0002251,9.29e-08,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.91e-08;58 | |ontology_enrichment_development_v019=CL:0000223;1.91e-08;58 | ||
|ontology_enrichment_disease=DOID:0050687!1.86e-11!143;DOID:305!1.13e-09!106;DOID:7!1.67e-07!39 | |ontology_enrichment_disease=DOID:0050687!1.86e-11!143;DOID:305!1.13e-09!106;DOID:7!1.67e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.19e-09,143;DOID:305,1.39e-08,106;DOID:7,2.06e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.14e-17!169;UBERON:0000925!3.14e-17!169;UBERON:0006595!3.14e-17!169;UBERON:0003104!5.98e-16!238;UBERON:0009142!5.98e-16!238;UBERON:0002100!7.53e-13!216;UBERON:0001007!1.66e-12!155;UBERON:0001555!1.66e-12!155;UBERON:0007026!1.66e-12!155;UBERON:0000481!9.08e-12!347;UBERON:0005256!9.31e-12!143;UBERON:0000475!2.87e-11!365;UBERON:0000077!1.26e-10!130;UBERON:0000490!1.43e-10!138;UBERON:0003102!2.83e-10!95;UBERON:0005911!3.64e-10!82;UBERON:0000468!1.06e-09!659;UBERON:0000119!1.89e-09!312;UBERON:0000483!2.76e-09!309;UBERON:0004921!4.85e-09!129;UBERON:0004185!4.85e-09!129;UBERON:0009569!5.05e-09!113;UBERON:0003914!9.06e-09!118;UBERON:0005177!1.77e-08!107;UBERON:0003929!1.82e-08!54;UBERON:0001048!1.89e-08!168;UBERON:0002365!4.24e-08!31;UBERON:0002330!4.24e-08!31;UBERON:0006554!6.96e-08!44;UBERON:0001041!7.65e-08!98;UBERON:0000466!1.15e-07!126;UBERON:0005172!1.18e-07!55;UBERON:0005173!1.18e-07!55;UBERON:0001008!2.56e-07!45;UBERON:0002530!3.11e-07!59;UBERON:0002417!3.77e-07!61;UBERON:0000916!3.77e-07!61;UBERON:0005085!3.96e-07!29;UBERON:0001004!5.00e-07!72;UBERON:0002097!5.06e-07!40;UBERON:0000467!8.35e-07!625 | |ontology_enrichment_uberon=UBERON:0004119!3.14e-17!169;UBERON:0000925!3.14e-17!169;UBERON:0006595!3.14e-17!169;UBERON:0003104!5.98e-16!238;UBERON:0009142!5.98e-16!238;UBERON:0002100!7.53e-13!216;UBERON:0001007!1.66e-12!155;UBERON:0001555!1.66e-12!155;UBERON:0007026!1.66e-12!155;UBERON:0000481!9.08e-12!347;UBERON:0005256!9.31e-12!143;UBERON:0000475!2.87e-11!365;UBERON:0000077!1.26e-10!130;UBERON:0000490!1.43e-10!138;UBERON:0003102!2.83e-10!95;UBERON:0005911!3.64e-10!82;UBERON:0000468!1.06e-09!659;UBERON:0000119!1.89e-09!312;UBERON:0000483!2.76e-09!309;UBERON:0004921!4.85e-09!129;UBERON:0004185!4.85e-09!129;UBERON:0009569!5.05e-09!113;UBERON:0003914!9.06e-09!118;UBERON:0005177!1.77e-08!107;UBERON:0003929!1.82e-08!54;UBERON:0001048!1.89e-08!168;UBERON:0002365!4.24e-08!31;UBERON:0002330!4.24e-08!31;UBERON:0006554!6.96e-08!44;UBERON:0001041!7.65e-08!98;UBERON:0000466!1.15e-07!126;UBERON:0005172!1.18e-07!55;UBERON:0005173!1.18e-07!55;UBERON:0001008!2.56e-07!45;UBERON:0002530!3.11e-07!59;UBERON:0002417!3.77e-07!61;UBERON:0000916!3.77e-07!61;UBERON:0005085!3.96e-07!29;UBERON:0001004!5.00e-07!72;UBERON:0002097!5.06e-07!40;UBERON:0000467!8.35e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.82e-08;31!UBERON:0002330;3.82e-08;31 | |ontology_enrichment_uberon_v019=UBERON:0002365;3.82e-08;31!UBERON:0002330;3.82e-08;31 | ||
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|phase1_expression=0.726713517082227,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,3.48935409640147,0,0,0.783556884599516,3.68600904752263,16.7472280313383,1.96597234917155,2.11013582582763,2.47532705920093,4.97096063591874,0.672325146451775,1.80808358407193,1.46062018077475,0.975865597581014,6.27917396191618,7.34402488479311,13.1650983020797,3.14859585844162,0.958120975510189,3.76627918784408,0,0.0821005894499457,0.157421562627358,0,0,0.619264493264304,24.824373060931,19.8795906393645,20.7062245693401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0,0,0.289648807765598,2.43806866313962,0.670700859703636,2.55725123687061,1.80719576192283,8.02140657017423,4.49024208778554,0,0.973269740605272,2.45790524626576,3.32594096193846,4.30390449896318,1.44076983047484,41.5296628653498,22.9886354526346,0,0,0,0,0,0,3.18019851786728,3.4409383804245,4.51282652089873,2.26123176769604,4.61449379830897,4.40188867104108,2.92592953151535,3.6178346283706,3.5576626268671,2.00832367658802,5.63961043952806,1.52054421143703,8.54217201418593,2.20597848207521,5.67099363517232,1.96459402224975,2.46982309888787,0.788280363383256,6.13266549863533,2.84779697870439,2.5648244150257,0,0,30.5265836499774,2.98183171017191,3.16576279161449,1.98613771219828,4.01571269048339,0.709336764396714,5.60677600142307,2.1349799145941,3.94668077467456,0.933633106199299,2.82892411346345,1.14423332179421,3.02714855289863,0.576175924479999,12.1847144553574,0.312160076830321,4.56377457235559,0.597794722207204,1.76151747965647,1.61872944368132,1.40450806702248,1.42907919878425,1.96534907698829,1.54988671763648,1.18800285728205,3.95627086845691,2.73048408581408,8.62341770179486,0.841680569770331,2.12701483782339,1.6623846929051,3.07284334616587,3.98434134538726,1.65261864797256,1.47461838108027,5.91985797773244,6.62027905337559,3.81477422087211,6.90209520994125,3.7098910525838,8.75977836155139,6.32797311527405,2.19409231913646,3.02054715999716,6.05841058185875,5.06274442532646,2.26304479546337,4.9701342952326,4.23158812556089,6.95198428472999,9.46978180500154,6.00041465299836,7.1701148847251,2.92736894711029,2.25300606146525,1.74290914304278,1.55491582523056,1.26160425437814,0.72995471815166,7.8224766164908,5.78916844373597,5.52539685409922,3.25057549622385,2.16563844500876,5.79703320195235,9.7779120245299,5.3022426574366,4.30146493656336,8.06153943141903,6.8808479542218,3.23595139584395,5.101758093259,4.23221872641029,2.95262181849859,4.20725321410337,4.115740113314,2.94017422771084,0,4.91413608338813,2.95394953340702,1.32438929824395,9.71608664490597,3.60292401626904,7.90202054942104,31.4724909121335,14.8782879169214,18.4251005865474,10.1000574646201,1.03993478527958,1.44331342025273,1.62302566965108,1.87853910777315,2.7429625074604,0,2.28304982681518,7.90204397959275,9.4433477830436,0,0,0,9.3733833986777,8.06314215354526,7.08875486211932,13.9711295416443,15.9848666182679,20.7026646749214,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.308482478109971,0,0,2.69114602428866,2.61576041299968,0.80672114403045,0.646358578788889,0,0.845302752556,6.11657668145202,4.16029747645464,5.40135485950498,7.09245660116391,6.12771011737029,1.57275793023962,1.62786481617433,3.29296134712308,0.325736184293735,3.19852753868291,1.58390374586686,1.20575750823834,1.74306691720059,1.59956785891291,0,0,0,5.27174682081482,16.0806710167759,2.85273810081437,1.59259437334337,1.2328579353023,2.32779252211864,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,5.27573414392302,2.50085260529839,5.69656549769445,2.49565033836969,4.28229573113188,6.46579901639132,3.5142424497814,3.61135319673263,9.09630016223939,1.03473071292505,7.3064815838898,4.97796755062599,1.99832313276591,3.32861967686659,3.77457766191941,0,0,0,2.72814814301633,6.65741758041988,12.0956117331872,1.24053903909388,1.84154367945675,2.52594084989766,0.896974044789907,1.53512174720011,1.93024705372329,1.48418066444991,0.308419387605311,0.177561725313127,0.246381468041427,0,0.348631135379878,10.2730532152879,7.01772646061497,14.4567152629357,2.29628896329214,2.00300284807389,2.62248829918848,9.92639148396306,3.54270550680308,10.1965469992991,8.76835347919564,1.89992932007176,3.4120015221269,3.06168669497728,5.61381381865562,6.16909010761157,7.31555381368403,9.53210570324221,3.05851527654046,6.64860807142979,2.46262230194396,0,0,7.69350375349168,6.23227826829441,3.25378394664303,1.64865618636356,6.68457093173907,3.96045599618822,13.208107373912,8.45078319847478,0,3.48014585851639,1.07834031980251,1.22802939780904,3.1702411671442,1.28904293841928,3.33538396002726,1.96021243057032,3.20515328328254,9.0906703448538,14.2220649850179,11.6127568370072,13.9597737580659,4.18360994367557,2.51849877464512,1.3940745403212,1.23213432070436,0,1.73986598415015,0.9266210955196,2.146873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| ||
|short_description=p3@AJUBA | |short_description=p3@AJUBA | ||
}} | }} |
Latest revision as of 08:32, 19 September 2015
Short description: | p3@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AJUBA_5end |
Coexpression cluster: | C1716_Corneal_oral_Keratinocyte_mesothelioma_Esophageal_Urothelial_anaplastic |
Association with transcript: | 33bp_to_NM_032876, uc001whz.2_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | Q96IF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.64e-45 | 253 |
embryonic cell | 1.18e-27 | 250 |
endodermal cell | 7.63e-16 | 58 |
squamous epithelial cell | 1.27e-14 | 63 |
endo-epithelial cell | 3.33e-14 | 42 |
lining cell | 2.22e-09 | 58 |
barrier cell | 2.22e-09 | 58 |
mesodermal cell | 2.81e-09 | 121 |
respiratory epithelial cell | 2.58e-08 | 13 |
epithelial cell of alimentary canal | 9.29e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.39e-17 | 160 |
endoderm | 3.39e-17 | 160 |
presumptive endoderm | 3.39e-17 | 160 |
digestive system | 5.20e-12 | 145 |
digestive tract | 5.20e-12 | 145 |
primitive gut | 5.20e-12 | 145 |
surface structure | 1.01e-10 | 99 |
unilaminar epithelium | 1.23e-10 | 148 |
endo-epithelium | 2.14e-10 | 82 |
mesenchyme | 2.50e-09 | 160 |
entire embryonic mesenchyme | 2.50e-09 | 160 |
cell layer | 5.06e-09 | 309 |
epithelium | 5.48e-09 | 306 |
gut epithelium | 6.03e-09 | 54 |
trunk | 7.26e-09 | 199 |
exocrine gland | 1.10e-08 | 31 |
exocrine system | 1.10e-08 | 31 |
subdivision of digestive tract | 2.50e-08 | 118 |
gland | 7.27e-08 | 59 |
urinary system structure | 8.24e-08 | 47 |
foregut | 1.11e-07 | 87 |
epithelial tube | 1.20e-07 | 117 |
trunk region element | 1.95e-07 | 101 |
trunk mesenchyme | 2.07e-07 | 122 |
primordium | 2.22e-07 | 160 |
renal system | 2.34e-07 | 48 |
ectodermal placode | 2.78e-07 | 31 |
epithelial sac | 4.00e-07 | 25 |
respiratory system | 7.09e-07 | 74 |
abdomen element | 7.73e-07 | 54 |
abdominal segment element | 7.73e-07 | 54 |
subdivision of trunk | 8.15e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.19e-09 | 143 |
carcinoma | 1.39e-08 | 106 |
disease of anatomical entity | 2.06e-07 | 39 |