FFCP PHASE1:Hg19::chr1:183213421..183213517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183213421..183213517,+ | |||
|coexpression_cluster_id=C362 | |coexpression_cluster_id=C362 | ||
|description=CAGE_peak_at_chr1:183213421..183213517,+ | |description=CAGE_peak_at_chr1:183213421..183213517,+ | ||
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|ontology_enrichment_celltype=CL:0000066!1.17e-30!254;CL:0002076!1.30e-21!43;CL:0000076!1.01e-13!62;CL:0000223!1.18e-13!59;CL:0002251!3.82e-12!21;CL:0002368!1.62e-09!13;CL:0000220!6.72e-09!246;CL:0002321!1.14e-08!248;CL:0002159!2.57e-07!13;CL:0000622!2.69e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.17e-30!254;CL:0002076!1.30e-21!43;CL:0000076!1.01e-13!62;CL:0000223!1.18e-13!59;CL:0002251!3.82e-12!21;CL:0002368!1.62e-09!13;CL:0000220!6.72e-09!246;CL:0002321!1.14e-08!248;CL:0002159!2.57e-07!13;CL:0000622!2.69e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.59e-29;42!CL:0002368;2.10e-19;13!CL:0002251;5.23e-17;20!CL:0000622;7.09e-16;5!CL:0002159;8.44e-14;14!CL:0000244;1.01e-13;4!CL:0000731;1.01e-13;4!CL:0000154;3.55e-13;6!CL:0002621;7.26e-11;3!CL:0002328;2.21e-10;3!CL:0002623;3.34e-10;3!CL:0000240;3.45e-09;6!CL:0000311;3.45e-09;6!CL:0000079;3.45e-09;6!CL:0000237;3.45e-09;6!CL:0000362;5.75e-09;9!CL:0002202;9.14e-09;9!CL:0002632;9.14e-09;9!CL:0000150;1.15e-08;9!CL:0002077;5.25e-08;34!CL:0000317;2.29e-07;2!CL:1000448;2.29e-07;2!CL:0002308;2.29e-07;2!CL:0002140;2.29e-07;2!CL:0002536;4.45e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;4.59e-29;42!CL:0002368;2.10e-19;13!CL:0002251;5.23e-17;20!CL:0000622;7.09e-16;5!CL:0002159;8.44e-14;14!CL:0000244;1.01e-13;4!CL:0000731;1.01e-13;4!CL:0000154;3.55e-13;6!CL:0002621;7.26e-11;3!CL:0002328;2.21e-10;3!CL:0002623;3.34e-10;3!CL:0000240;3.45e-09;6!CL:0000311;3.45e-09;6!CL:0000079;3.45e-09;6!CL:0000237;3.45e-09;6!CL:0000362;5.75e-09;9!CL:0002202;9.14e-09;9!CL:0002632;9.14e-09;9!CL:0000150;1.15e-08;9!CL:0002077;5.25e-08;34!CL:0000317;2.29e-07;2!CL:1000448;2.29e-07;2!CL:0002308;2.29e-07;2!CL:0002140;2.29e-07;2!CL:0002536;4.45e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.31e-35,42;CL:0000066,1.74e-31,253;CL:0000223,7.29e-24,58;CL:0002368,1.36e-19,13;CL:0002251,5.04e-17,20;CL:0000622,6.58e-16,5;CL:0002159,7.43e-14,14;CL:0000244,1.07e-13,4;CL:0000731,1.07e-13,4;CL:0000154,3.34e-13,6;CL:0002621,7.28e-11,3;CL:0002328,1.75e-10,3;CL:0002623,3.20e-10,3;CL:0000240,3.49e-09,6;CL:0000311,3.49e-09,6;CL:0000079,3.49e-09,6;CL:0000237,3.49e-09,6;CL:0000036,3.49e-09,6;CL:0000357,3.49e-09,6;CL:0000114,3.49e-09,6;CL:0002077,3.62e-09,34;CL:0000362,5.71e-09,9;CL:0002202,6.65e-09,9;CL:0002632,6.65e-09,9;CL:0000150,1.10e-08,9;CL:0000076,1.11e-08,63;CL:0002321,2.84e-08,250;CL:0000317,2.23e-07,2;CL:1000448,2.23e-07,2;CL:0002308,2.23e-07,2;CL:0002140,2.23e-07,2;CL:0002536,4.19e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;5.76e-11;58!CL:0000357;3.45e-09;6!CL:0000114;3.45e-09;6 | |ontology_enrichment_development_v019=CL:0000223;5.76e-11;58!CL:0000357;3.45e-09;6!CL:0000114;3.45e-09;6 | ||
|ontology_enrichment_disease=DOID:1749!1.16e-14!14;DOID:305!8.37e-09!106 | |ontology_enrichment_disease=DOID:1749!1.16e-14!14;DOID:305!8.37e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.28e-09;14 | |ontology_enrichment_disease_v019=DOID:1749;1.28e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.60e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.91e-10!82;UBERON:0004119!2.83e-10!169;UBERON:0000925!2.83e-10!169;UBERON:0006595!2.83e-10!169;UBERON:0005910!2.76e-08!6;UBERON:0000365!1.84e-07!5;UBERON:0001004!5.22e-07!72 | |ontology_enrichment_uberon=UBERON:0005911!1.91e-10!82;UBERON:0004119!2.83e-10!169;UBERON:0000925!2.83e-10!169;UBERON:0006595!2.83e-10!169;UBERON:0005910!2.76e-08!6;UBERON:0000365!1.84e-07!5;UBERON:0001004!5.22e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.96e-16;12!UBERON:0000365;2.93e-16;5!UBERON:0005910;1.71e-13;6!UBERON:0005911;7.30e-12;36!UBERON:0001949;7.26e-11;3!UBERON:0004815;2.21e-10;3!UBERON:0002031;2.21e-10;3!UBERON:0004807;4.50e-10;22!UBERON:0000161;1.81e-09;19!UBERON:0000166;1.81e-09;19!UBERON:0000344;8.64e-09;20!UBERON:0003729;2.30e-08;13!UBERON:0000165;1.23e-07;28!UBERON:0002419;2.29e-07;2!UBERON:0007771;2.29e-07;2!UBERON:0003297;2.29e-07;2!UBERON:0001821;2.29e-07;2!UBERON:0003487;2.29e-07;2!UBERON:0001820;2.29e-07;2!UBERON:0000305;5.24e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000486;1.96e-16;12!UBERON:0000365;2.93e-16;5!UBERON:0005910;1.71e-13;6!UBERON:0005911;7.30e-12;36!UBERON:0001949;7.26e-11;3!UBERON:0004815;2.21e-10;3!UBERON:0002031;2.21e-10;3!UBERON:0004807;4.50e-10;22!UBERON:0000161;1.81e-09;19!UBERON:0000166;1.81e-09;19!UBERON:0000344;8.64e-09;20!UBERON:0003729;2.30e-08;13!UBERON:0000165;1.23e-07;28!UBERON:0002419;2.29e-07;2!UBERON:0007771;2.29e-07;2!UBERON:0003297;2.29e-07;2!UBERON:0001821;2.29e-07;2!UBERON:0003487;2.29e-07;2!UBERON:0001820;2.29e-07;2!UBERON:0000305;5.24e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.55e-16,5;UBERON:0005910,1.53e-13,6;UBERON:0001004,2.78e-12,74;UBERON:0004119,2.90e-12,160;UBERON:0000925,2.90e-12,160;UBERON:0006595,2.90e-12,160;UBERON:0001949,7.28e-11,3;UBERON:0004815,1.75e-10,3;UBERON:0002031,1.75e-10,3;UBERON:0005911,2.45e-09,82;UBERON:0000344,8.18e-09,20;UBERON:0000161,1.54e-08,36;UBERON:0003729,2.28e-08,13;UBERON:0005153,3.34e-08,37;UBERON:0003102,4.39e-08,99;UBERON:0000166,5.31e-08,22;UBERON:0004807,1.29e-07,28;UBERON:0002419,2.23e-07,2;UBERON:0007771,2.23e-07,2;UBERON:0003297,2.23e-07,2;UBERON:0001821,2.23e-07,2;UBERON:0003487,2.23e-07,2;UBERON:0001820,2.23e-07,2;UBERON:0005089,2.23e-07,2;UBERON:0005088,2.23e-07,2;UBERON:0000165,2.52e-07,29;UBERON:0000930,2.52e-07,29;UBERON:0005157,3.58e-07,47;UBERON:0000305,6.10e-07,7;UBERON:0003350,9.79e-07,8 | |||
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| ||
|short_description=p@chr1:183213421..183213517,+ | |short_description=p@chr1:183213421..183213517,+ | ||
}} | }} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213421..183213517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213421..183213517, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 2.55e-16 | 5 |
transitional epithelium | 1.53e-13 | 6 |
respiratory system | 2.78e-12 | 74 |
endoderm-derived structure | 2.90e-12 | 160 |
endoderm | 2.90e-12 | 160 |
presumptive endoderm | 2.90e-12 | 160 |
gingival epithelium | 7.28e-11 | 3 |
lower respiratory tract epithelium | 1.75e-10 | 3 |
epithelium of bronchus | 1.75e-10 | 3 |
endo-epithelium | 2.45e-09 | 82 |
mucosa | 8.18e-09 | 20 |
orifice | 1.54e-08 | 36 |
mouth mucosa | 2.28e-08 | 13 |
epithelial bud | 3.34e-08 | 37 |
surface structure | 4.39e-08 | 99 |
oral opening | 5.31e-08 | 22 |
respiratory system epithelium | 1.29e-07 | 28 |
skin gland | 2.23e-07 | 2 |
epidermis gland | 2.23e-07 | 2 |
gland of integumental system | 2.23e-07 | 2 |
sebaceous gland | 2.23e-07 | 2 |
skin sebaceous gland | 2.23e-07 | 2 |
sweat gland | 2.23e-07 | 2 |
sweat gland placode | 2.23e-07 | 2 |
sebaceous gland placode | 2.23e-07 | 2 |
mouth | 2.52e-07 | 29 |
stomodeum | 2.52e-07 | 29 |
epithelial fold | 3.58e-07 | 47 |
amnion | 6.10e-07 | 7 |
epithelium of mucosa | 9.79e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.60e-09 | 14 |