FFCP PHASE1:Hg19::chr6:159083954..159083961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=172bp_to_uc011efq.1_5end | |association_with_transcript=172bp_to_uc011efq.1_5end | ||
|cluster_id=chr6:159083954..159083961,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_15_at_SYTL3_5end | |description=CAGE_peak_15_at_SYTL3_5end | ||
Line 9: | Line 14: | ||
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|ontology_enrichment_celltype_v019=CL:0000097;6.02e-60;5!CL:0000163;8.87e-34;9!CL:0000766;3.92e-11;69!CL:0000151;3.96e-09;36!CL:0000860;5.08e-09;33!CL:0002057;5.08e-09;33!CL:0000473;1.19e-07;39!CL:0000234;1.19e-07;39 | |ontology_enrichment_celltype_v019=CL:0000097;6.02e-60;5!CL:0000163;8.87e-34;9!CL:0000766;3.92e-11;69!CL:0000151;3.96e-09;36!CL:0000860;5.08e-09;33!CL:0002057;5.08e-09;33!CL:0000473;1.19e-07;39!CL:0000234;1.19e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.03e-60,5;CL:0002028,6.03e-60,5;CL:0000163,8.87e-34,9;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0000151,4.60e-09,36;CL:0000860,8.93e-08,42;CL:0002057,8.93e-08,42;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177;CL:0000473,6.92e-07,48;CL:0000234,6.92e-07,48 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.89e-36!102;UBERON:0003061!5.89e-36!102;UBERON:0002193!3.81e-32!112;UBERON:0002371!1.91e-22!80;UBERON:0001474!1.56e-20!86;UBERON:0002405!3.96e-17!115;UBERON:0004765!9.59e-17!101;UBERON:0001434!9.59e-17!101;UBERON:0003081!1.77e-14!216;UBERON:0000178!3.24e-14!15;UBERON:0000179!3.24e-14!15;UBERON:0000463!3.24e-14!15;UBERON:0002204!3.69e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!5.89e-36!102;UBERON:0003061!5.89e-36!102;UBERON:0002193!3.81e-32!112;UBERON:0002371!1.91e-22!80;UBERON:0001474!1.56e-20!86;UBERON:0002405!3.96e-17!115;UBERON:0004765!9.59e-17!101;UBERON:0001434!9.59e-17!101;UBERON:0003081!1.77e-14!216;UBERON:0000178!3.24e-14!15;UBERON:0000179!3.24e-14!15;UBERON:0000463!3.24e-14!15;UBERON:0002204!3.69e-09!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
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|short_description=p15@SYTL3 | |short_description=p15@SYTL3 | ||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p15@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SYTL3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 172bp_to_uc011efq.1_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.03e-60 | 5 |
basophil mast progenitor cell | 6.03e-60 | 5 |
endocrine cell | 8.87e-34 | 9 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
secretory cell | 4.60e-09 | 36 |
classical monocyte | 8.93e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.93e-08 | 42 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
defensive cell | 6.92e-07 | 48 |
phagocyte | 6.92e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |