FFCP PHASE1:Hg19::chr10:79468189..79468192,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79468189..79468192,- | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_at_chr10:79468189..79468192,- | |description=CAGE_peak_at_chr10:79468189..79468192,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!1.21e-17!6;CL:0000838!9.36e-13!52;CL:0000542!1.69e-12!53;CL:0000051!1.69e-12!53;CL:0000945!2.32e-11!24;CL:0000826!2.32e-11!24;CL:0000988!2.10e-08!182 | |ontology_enrichment_celltype=CL:0000080!1.21e-17!6;CL:0000838!9.36e-13!52;CL:0000542!1.69e-12!53;CL:0000051!1.69e-12!53;CL:0000945!2.32e-11!24;CL:0000826!2.32e-11!24;CL:0000988!2.10e-08!182 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!2.74e-18!10;DOID:0060060!1.25e-12!1;DOID:0060061!1.25e-12!1;DOID:8691!1.25e-12!1;DOID:2355!1.40e-12!1;DOID:2531!4.03e-10!51;DOID:0060083!4.03e-10!51;DOID:74!6.42e-07!2 | |ontology_enrichment_disease=DOID:0060058!2.74e-18!10;DOID:0060060!1.25e-12!1;DOID:0060061!1.25e-12!1;DOID:8691!1.25e-12!1;DOID:2355!1.40e-12!1;DOID:2531!4.03e-10!51;DOID:0060083!4.03e-10!51;DOID:74!6.42e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.16e-29;1!DOID:0060061;3.16e-29;1!DOID:8691;3.16e-29;1!DOID:2355;4.20e-29;1!DOID:0060058;5.53e-26;10!DOID:74;2.74e-15;2!DOID:1287;2.61e-08;4!DOID:2531;6.26e-07;51!DOID:0060083;6.26e-07;51 | |ontology_enrichment_disease_v019=DOID:0060060;3.16e-29;1!DOID:0060061;3.16e-29;1!DOID:8691;3.16e-29;1!DOID:2355;4.20e-29;1!DOID:0060058;5.53e-26;10!DOID:74;2.74e-15;2!DOID:1287;2.61e-08;4!DOID:2531;6.26e-07;51!DOID:0060083;6.26e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.16e-29,1;DOID:0060061,3.16e-29,1;DOID:8691,3.16e-29,1;DOID:2355,4.20e-29,1;DOID:0060058,5.53e-26,10;DOID:74,2.74e-15,2;DOID:2531,2.22e-09,51;DOID:0060083,2.22e-09,51;DOID:1287,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0002331!8.09e-11!10;UBERON:0000358!8.09e-11!10;UBERON:0000307!8.09e-11!10;UBERON:0000091!8.09e-11!10;UBERON:0000087!8.09e-11!10;UBERON:0007806!8.09e-11!10;UBERON:0008780!8.09e-11!10;UBERON:0005728!8.09e-11!10;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15 | |ontology_enrichment_uberon=UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0002331!8.09e-11!10;UBERON:0000358!8.09e-11!10;UBERON:0000307!8.09e-11!10;UBERON:0000091!8.09e-11!10;UBERON:0000087!8.09e-11!10;UBERON:0007806!8.09e-11!10;UBERON:0008780!8.09e-11!10;UBERON:0005728!8.09e-11!10;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0002390;2.42e-14;32!UBERON:0000478;2.43e-11;24!UBERON:0002106;7.42e-11;3!UBERON:0002193;2.98e-07;42!UBERON:0004177;5.08e-07;5!UBERON:0005057;5.08e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0002390;2.42e-14;32!UBERON:0000478;2.43e-11;24!UBERON:0002106;7.42e-11;3!UBERON:0002193;2.98e-07;42!UBERON:0004177;5.08e-07;5!UBERON:0005057;5.08e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.28e-26,10;UBERON:0000358,4.28e-26,10;UBERON:0000307,4.28e-26,10;UBERON:0000091,4.28e-26,10;UBERON:0000087,4.28e-26,10;UBERON:0007010,4.28e-26,10;UBERON:0007806,4.28e-26,10;UBERON:0008780,4.28e-26,10;UBERON:0005728,4.28e-26,10;UBERON:0000178,1.10e-17,15;UBERON:0000179,1.10e-17,15;UBERON:0000463,1.10e-17,15;UBERON:0000478,2.43e-11,24;UBERON:0002106,7.42e-11,3;UBERON:0004854,7.42e-11,3;UBERON:0009034,7.42e-11,3;UBERON:0002095,7.42e-11,3;UBERON:0004782,7.42e-11,3;UBERON:0003281,7.42e-11,3;UBERON:0009664,7.42e-11,3;UBERON:0002296,7.42e-11,3;UBERON:0005602,7.42e-11,3;UBERON:0001179,7.42e-11,3;UBERON:0006293,7.42e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,13.6399719193086,14.3334169177943,19.1092167594983,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2114846673491,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21758661849981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,45.2733436339928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,13.6399719193086,14.3334169177943,19.1092167594983,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2114846673491,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21758661849981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,45.2733436339928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:79468189..79468192,- | |short_description=p@chr10:79468189..79468192,- | ||
}} | }} |
Latest revision as of 15:48, 23 July 2015
Short description: | p@chr10:79468189..79468192, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79468189..79468192, - |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.28e-26 | 10 |
blastocyst | 4.28e-26 | 10 |
blastula | 4.28e-26 | 10 |
bilaminar disc | 4.28e-26 | 10 |
inner cell mass | 4.28e-26 | 10 |
cleaving embryo | 4.28e-26 | 10 |
connecting stalk | 4.28e-26 | 10 |
inner cell mass derived epiblast | 4.28e-26 | 10 |
extraembryonic mesoderm | 4.28e-26 | 10 |
blood | 1.10e-17 | 15 |
haemolymphatic fluid | 1.10e-17 | 15 |
organism substance | 1.10e-17 | 15 |
extraembryonic structure | 2.43e-11 | 24 |
spleen | 7.42e-11 | 3 |
gastrointestinal system mesentery | 7.42e-11 | 3 |
stomach region | 7.42e-11 | 3 |
mesentery | 7.42e-11 | 3 |
gastrointestinal system serosa | 7.42e-11 | 3 |
mesentery of stomach | 7.42e-11 | 3 |
gut mesentery | 7.42e-11 | 3 |
dorsal mesentery | 7.42e-11 | 3 |
dorsal mesogastrium | 7.42e-11 | 3 |
peritoneal cavity | 7.42e-11 | 3 |
spleen primordium | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.16e-29 | 1 |
cutaneous T cell lymphoma | 3.16e-29 | 1 |
mycosis fungoides | 3.16e-29 | 1 |
anemia | 4.20e-29 | 1 |
lymphoma | 5.53e-26 | 10 |
hematopoietic system disease | 2.74e-15 | 2 |
hematologic cancer | 2.22e-09 | 51 |
immune system cancer | 2.22e-09 | 51 |
cardiovascular system disease | 2.61e-08 | 4 |