FFCP PHASE1:Hg19::chr12:106641852..106641863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt=Q07065 | |UniProt=Q07065 | ||
|association_with_transcript=-86bp_to_ENST00000378026_5end | |association_with_transcript=-86bp_to_ENST00000378026_5end | ||
|cluster_id=chr12:106641852..106641863,- | |||
|description=CAGE_peak_9_at_CKAP4_5end | |description=CAGE_peak_9_at_CKAP4_5end | ||
|id=chr12:106641852..106641863,- | |id=chr12:106641852..106641863,- | ||
|ontology_enrichment_celltype=CL:0000055!4.48e-18!180;CL:0000222!1.90e-15!119;CL:0000220!2.30e-15!246;CL:0002321!2.74e-15!248;CL:0000183!6.84e-12!59;CL:0000680!2.40e-11!57;CL:0000056!2.40e-11!57;CL:0000355!2.40e-11!57;CL:0000393!4.53e-11!60;CL:0000211!4.53e-11!60;CL:0000187!6.85e-11!54;CL:0000192!1.36e-10!42;CL:0000514!1.36e-10!42;CL:0000359!1.29e-08!32;CL:0000144!1.61e-07!625;CL:0000548!3.16e-07!679;CL:0000004!3.16e-07!679;CL:0000255!3.16e-07!679;CL:0000012!7.80e-07!682 | |ontology_enrichment_celltype=CL:0000055!4.48e-18!180;CL:0000222!1.90e-15!119;CL:0000220!2.30e-15!246;CL:0002321!2.74e-15!248;CL:0000183!6.84e-12!59;CL:0000680!2.40e-11!57;CL:0000056!2.40e-11!57;CL:0000355!2.40e-11!57;CL:0000393!4.53e-11!60;CL:0000211!4.53e-11!60;CL:0000187!6.85e-11!54;CL:0000192!1.36e-10!42;CL:0000514!1.36e-10!42;CL:0000359!1.29e-08!32;CL:0000144!1.61e-07!625;CL:0000548!3.16e-07!679;CL:0000004!3.16e-07!679;CL:0000255!3.16e-07!679;CL:0000012!7.80e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.82e-07;43!CL:0000359;3.32e-07;32 | |ontology_enrichment_celltype_v019=CL:0000192;2.82e-07;43!CL:0000359;3.32e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.32e-12,121;CL:0000680,4.13e-11,58;CL:0000056,4.13e-11,58;CL:0000355,4.13e-11,58;CL:0000393,1.05e-10,61;CL:0000211,1.05e-10,61;CL:0000187,1.95e-10,55;CL:0000192,5.89e-10,43;CL:0000514,5.89e-10,43;CL:0002321,1.19e-08,250;CL:0000359,2.12e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.82e-07;43 | |ontology_enrichment_development_v019=CL:0000514;2.82e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.70e-15!79;UBERON:0007798!3.70e-15!79;UBERON:0000055!3.03e-13!69;UBERON:0001981!1.09e-12!60;UBERON:0007500!1.09e-12!60;UBERON:0004537!1.09e-12!60;UBERON:0006965!1.09e-12!60;UBERON:0001134!2.28e-11!61;UBERON:0002036!2.28e-11!61;UBERON:0003082!2.28e-11!61;UBERON:0000490!3.75e-11!138;UBERON:0000468!5.26e-11!659;UBERON:0001637!9.20e-11!42;UBERON:0003509!9.20e-11!42;UBERON:0004572!9.20e-11!42;UBERON:0003914!2.12e-10!118;UBERON:0002385!2.83e-10!63;UBERON:0001015!2.83e-10!63;UBERON:0000383!2.83e-10!63;UBERON:0000486!4.74e-10!82;UBERON:0001009!5.29e-10!113;UBERON:0004290!5.89e-10!70;UBERON:0000914!1.09e-09!83;UBERON:0002329!1.09e-09!83;UBERON:0003077!1.09e-09!83;UBERON:0003059!1.09e-09!83;UBERON:0007282!1.09e-09!83;UBERON:0009618!1.09e-09!83;UBERON:0007285!1.09e-09!83;UBERON:0004535!1.14e-09!110;UBERON:0004872!1.62e-09!84;UBERON:0004573!5.51e-09!33;UBERON:0004571!5.51e-09!33;UBERON:0000480!8.80e-09!626;UBERON:0005256!1.68e-08!143;UBERON:0000467!1.91e-08!625;UBERON:0000119!2.31e-08!312;UBERON:0000483!4.61e-08!309;UBERON:0000922!1.66e-07!612 | |ontology_enrichment_uberon=UBERON:0002049!3.70e-15!79;UBERON:0007798!3.70e-15!79;UBERON:0000055!3.03e-13!69;UBERON:0001981!1.09e-12!60;UBERON:0007500!1.09e-12!60;UBERON:0004537!1.09e-12!60;UBERON:0006965!1.09e-12!60;UBERON:0001134!2.28e-11!61;UBERON:0002036!2.28e-11!61;UBERON:0003082!2.28e-11!61;UBERON:0000490!3.75e-11!138;UBERON:0000468!5.26e-11!659;UBERON:0001637!9.20e-11!42;UBERON:0003509!9.20e-11!42;UBERON:0004572!9.20e-11!42;UBERON:0003914!2.12e-10!118;UBERON:0002385!2.83e-10!63;UBERON:0001015!2.83e-10!63;UBERON:0000383!2.83e-10!63;UBERON:0000486!4.74e-10!82;UBERON:0001009!5.29e-10!113;UBERON:0004290!5.89e-10!70;UBERON:0000914!1.09e-09!83;UBERON:0002329!1.09e-09!83;UBERON:0003077!1.09e-09!83;UBERON:0003059!1.09e-09!83;UBERON:0007282!1.09e-09!83;UBERON:0009618!1.09e-09!83;UBERON:0007285!1.09e-09!83;UBERON:0004535!1.14e-09!110;UBERON:0004872!1.62e-09!84;UBERON:0004573!5.51e-09!33;UBERON:0004571!5.51e-09!33;UBERON:0000480!8.80e-09!626;UBERON:0005256!1.68e-08!143;UBERON:0000467!1.91e-08!625;UBERON:0000119!2.31e-08!312;UBERON:0000483!4.61e-08!309;UBERON:0000922!1.66e-07!612 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p9@CKAP4 | |short_description=p9@CKAP4 | ||
}} | }} |
Latest revision as of 02:28, 16 September 2015
Short description: | p9@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CKAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000378026_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q07065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.32e-12 | 121 |
muscle precursor cell | 4.13e-11 | 58 |
myoblast | 4.13e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-11 | 58 |
electrically responsive cell | 1.05e-10 | 61 |
electrically active cell | 1.05e-10 | 61 |
muscle cell | 1.95e-10 | 55 |
smooth muscle cell | 5.89e-10 | 43 |
smooth muscle myoblast | 5.89e-10 | 43 |
embryonic cell | 1.19e-08 | 250 |
vascular associated smooth muscle cell | 2.12e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.07e-11 | 78 |
vascular system | 2.07e-11 | 78 |
epithelial vesicle | 1.91e-10 | 78 |
skeletal muscle tissue | 2.91e-10 | 62 |
striated muscle tissue | 2.91e-10 | 62 |
myotome | 2.91e-10 | 62 |
dense mesenchyme tissue | 8.45e-10 | 73 |
vessel | 8.48e-10 | 68 |
epithelial tube open at both ends | 1.23e-09 | 59 |
blood vessel | 1.23e-09 | 59 |
blood vasculature | 1.23e-09 | 59 |
vascular cord | 1.23e-09 | 59 |
muscle tissue | 1.40e-09 | 64 |
musculature | 1.40e-09 | 64 |
musculature of body | 1.40e-09 | 64 |
somite | 1.63e-09 | 71 |
presomitic mesoderm | 1.63e-09 | 71 |
presumptive segmental plate | 1.63e-09 | 71 |
dermomyotome | 1.63e-09 | 71 |
trunk paraxial mesoderm | 1.63e-09 | 71 |
paraxial mesoderm | 3.25e-09 | 72 |
presumptive paraxial mesoderm | 3.25e-09 | 72 |
cardiovascular system | 6.10e-09 | 109 |
circulatory system | 6.44e-09 | 112 |
multilaminar epithelium | 1.15e-08 | 83 |
unilaminar epithelium | 1.21e-08 | 148 |
splanchnic layer of lateral plate mesoderm | 2.93e-08 | 83 |
epithelial tube | 5.21e-08 | 117 |
artery | 5.46e-08 | 42 |
arterial blood vessel | 5.46e-08 | 42 |
arterial system | 5.46e-08 | 42 |
mesenchyme | 6.71e-08 | 160 |
entire embryonic mesenchyme | 6.71e-08 | 160 |
trunk mesenchyme | 3.24e-07 | 122 |