FFCP PHASE1:Hg19::chr15:49768443..49768444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:49768443..49768444,+ | |||
|description=CAGE_peak_at_chr15:49768443..49768444,+ | |description=CAGE_peak_at_chr15:49768443..49768444,+ | ||
|id=chr15:49768443..49768444,+ | |id=chr15:49768443..49768444,+ | ||
|ontology_enrichment_celltype=CL:0002570!2.46e-07!8;CL:0002504!9.90e-07!3;CL:1000279!9.90e-07!3;CL:1000280!9.90e-07!3 | |ontology_enrichment_celltype=CL:0002570!2.46e-07!8;CL:0002504!9.90e-07!3;CL:1000279!9.90e-07!3;CL:1000280!9.90e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;7.26e-14;3!CL:1000279;7.26e-14;3!CL:1000280;7.26e-14;3!CL:0002580;1.11e-12;3!CL:0000723;1.34e-10;61!CL:0000197;1.47e-10;6!CL:0000098;1.47e-10;6!CL:0002167;1.47e-10;6!CL:0000134;1.70e-10;55!CL:0000048;2.67e-10;58!CL:0000034;1.04e-09;69!CL:0002617;6.80e-09;2!CL:0002570;2.09e-08;8!CL:0002540;9.20e-07;6 | |ontology_enrichment_celltype_v019=CL:0002504;7.26e-14;3!CL:1000279;7.26e-14;3!CL:1000280;7.26e-14;3!CL:0002580;1.11e-12;3!CL:0000723;1.34e-10;61!CL:0000197;1.47e-10;6!CL:0000098;1.47e-10;6!CL:0002167;1.47e-10;6!CL:0000134;1.70e-10;55!CL:0000048;2.67e-10;58!CL:0000034;1.04e-09;69!CL:0002617;6.80e-09;2!CL:0002570;2.09e-08;8!CL:0002540;9.20e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,7.29e-14,3;CL:1000279,7.29e-14,3;CL:1000280,7.29e-14,3;CL:0002580,4.50e-13,3;CL:0000197,1.38e-10,6;CL:0000098,1.38e-10,6;CL:0002167,1.38e-10,6;CL:0000136,4.95e-09,15;CL:0002617,5.70e-09,2;CL:0002570,2.54e-08,8;CL:0002540,9.40e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.69e-11!14 | |ontology_enrichment_disease=DOID:2394!2.69e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.20e-17;14!DOID:120;1.17e-10;27!DOID:193;8.28e-10;29 | |ontology_enrichment_disease_v019=DOID:2394;1.20e-17;14!DOID:120;1.17e-10;27!DOID:193;8.28e-10;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,9.63e-18,14;DOID:120,1.10e-10,27;DOID:193,7.80e-10,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;4.93e-10;4!UBERON:0000310;8.68e-10;10!UBERON:0001443;7.18e-09;11!UBERON:0000992;6.70e-08;13 | |ontology_enrichment_uberon_v019=UBERON:0002119;4.93e-10;4!UBERON:0000310;8.68e-10;10!UBERON:0001443;7.18e-09;11!UBERON:0000992;6.70e-08;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,5.09e-10,4;UBERON:0000310,5.20e-10,10;UBERON:0001443,4.52e-09,11;UBERON:0000992,6.76e-08,13 | |||
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| ||
|short_description=p@chr15:49768443..49768444,+ | |short_description=p@chr15:49768443..49768444,+ | ||
}} | }} |
Latest revision as of 02:13, 25 July 2015
Short description: | p@chr15:49768443..49768444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:49768443..49768444, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 7.29e-14 | 3 |
smooth muscle cell of large intestine | 7.29e-14 | 3 |
smooth muscle cell of colon | 7.29e-14 | 3 |
preadipocyte of the breast | 4.50e-13 | 3 |
receptor cell | 1.38e-10 | 6 |
sensory epithelial cell | 1.38e-10 | 6 |
olfactory epithelial cell | 1.38e-10 | 6 |
fat cell | 4.95e-09 | 15 |
adipocyte of breast | 5.70e-09 | 2 |
mesenchymal stem cell of adipose | 2.54e-08 | 8 |
mesenchymal stem cell of the bone marrow | 9.40e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
left ovary | 5.09e-10 | 4 |
breast | 5.20e-10 | 10 |
chest | 4.52e-09 | 11 |
female gonad | 6.76e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.63e-18 | 14 |
female reproductive organ cancer | 1.10e-10 | 27 |
reproductive organ cancer | 7.80e-10 | 29 |