FFCP PHASE1:Hg19::chr4:77928601..77928612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77928601..77928612,- | |||
|coexpression_cluster_id=C1380 | |coexpression_cluster_id=C1380 | ||
|description=CAGE_peak_at_chr4:77928601..77928612,- | |description=CAGE_peak_at_chr4:77928601..77928612,- | ||
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|ontology_enrichment_celltype=CL:0000766!5.31e-24!76;CL:0002057!1.39e-22!42;CL:0000839!1.04e-21!70;CL:0000557!2.95e-21!71;CL:0000860!1.59e-20!45;CL:0002194!6.68e-20!63;CL:0000576!6.68e-20!63;CL:0000040!6.68e-20!63;CL:0000559!6.68e-20!63;CL:0002009!5.34e-19!65;CL:0000738!1.29e-18!140;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0000037!7.47e-15!172;CL:0000566!7.47e-15!172;CL:0002087!9.07e-14!119;CL:0002031!2.82e-13!124;CL:0000988!3.08e-13!182;CL:0002032!3.18e-11!165;CL:0000837!3.18e-11!165;CL:1000413!5.00e-10!9;CL:0002544!2.95e-08!6;CL:0000048!6.21e-08!430;CL:0000134!1.36e-07!358;CL:0000723!1.49e-07!436;CL:0000034!1.70e-07!444;CL:0000767!3.69e-07!3;CL:0000071!3.80e-07!18;CL:0002546!3.80e-07!18;CL:0002320!3.99e-07!365;CL:0000451!4.03e-07!10 | |ontology_enrichment_celltype=CL:0000766!5.31e-24!76;CL:0002057!1.39e-22!42;CL:0000839!1.04e-21!70;CL:0000557!2.95e-21!71;CL:0000860!1.59e-20!45;CL:0002194!6.68e-20!63;CL:0000576!6.68e-20!63;CL:0000040!6.68e-20!63;CL:0000559!6.68e-20!63;CL:0002009!5.34e-19!65;CL:0000738!1.29e-18!140;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0000037!7.47e-15!172;CL:0000566!7.47e-15!172;CL:0002087!9.07e-14!119;CL:0002031!2.82e-13!124;CL:0000988!3.08e-13!182;CL:0002032!3.18e-11!165;CL:0000837!3.18e-11!165;CL:1000413!5.00e-10!9;CL:0002544!2.95e-08!6;CL:0000048!6.21e-08!430;CL:0000134!1.36e-07!358;CL:0000723!1.49e-07!436;CL:0000034!1.70e-07!444;CL:0000767!3.69e-07!3;CL:0000071!3.80e-07!18;CL:0002546!3.80e-07!18;CL:0002320!3.99e-07!365;CL:0000451!4.03e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000767;1.21e-46;3!CL:0000097;1.82e-28;5!CL:0000094;5.58e-18;8!CL:0000037;1.31e-16;1!CL:0001024;1.31e-16;1!CL:0000222;2.25e-16;1!CL:0000163;3.89e-16;9!CL:0000081;2.95e-13;11!CL:0000766;1.71e-09;69 | |ontology_enrichment_celltype_v019=CL:0000767;1.21e-46;3!CL:0000097;1.82e-28;5!CL:0000094;5.58e-18;8!CL:0000037;1.31e-16;1!CL:0001024;1.31e-16;1!CL:0000222;2.25e-16;1!CL:0000163;3.89e-16;9!CL:0000081;2.95e-13;11!CL:0000766;1.71e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.21e-46,3;CL:0000097,1.74e-28,5;CL:0002028,1.74e-28,5;CL:0000094,5.58e-18,8;CL:0001024,1.41e-16,1;CL:0000766,2.77e-16,72;CL:0000163,3.80e-16,9;CL:0000081,2.95e-13,11;CL:0000763,1.22e-10,108;CL:0000049,1.22e-10,108;CL:0000738,2.87e-10,136;CL:0000037,6.02e-10,168;CL:0000988,2.18e-09,177;CL:0000839,4.96e-08,66;CL:0000557,6.58e-08,67;CL:0002032,7.23e-07,161;CL:0000837,7.23e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-09,76;UBERON:0001474,1.29e-08,82;UBERON:0004765,8.21e-08,90;UBERON:0002405,1.51e-07,93;UBERON:0002390,3.88e-07,98;UBERON:0003061,3.88e-07,98;UBERON:0001434,5.50e-07,100 | |||
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| ||
|short_description=p@chr4:77928601..77928612,- | |short_description=p@chr4:77928601..77928612,- | ||
}} | }} |
Latest revision as of 07:02, 30 July 2015
Short description: | p@chr4:77928601..77928612, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77928601..77928612, - |
Coexpression cluster: | C1380_Mast_CD14_Basophils_embryonic_pineal_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.21e-46 | 3 |
mast cell | 1.74e-28 | 5 |
basophil mast progenitor cell | 1.74e-28 | 5 |
granulocyte | 5.58e-18 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.41e-16 | 1 |
myeloid leukocyte | 2.77e-16 | 72 |
endocrine cell | 3.80e-16 | 9 |
blood cell | 2.95e-13 | 11 |
myeloid cell | 1.22e-10 | 108 |
common myeloid progenitor | 1.22e-10 | 108 |
leukocyte | 2.87e-10 | 136 |
hematopoietic stem cell | 6.02e-10 | 168 |
hematopoietic cell | 2.18e-09 | 177 |
myeloid lineage restricted progenitor cell | 4.96e-08 | 66 |
granulocyte monocyte progenitor cell | 6.58e-08 | 67 |
hematopoietic oligopotent progenitor cell | 7.23e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.23e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-09 | 76 |
bone element | 1.29e-08 | 82 |
skeletal element | 8.21e-08 | 90 |
immune system | 1.51e-07 | 93 |
hematopoietic system | 3.88e-07 | 98 |
blood island | 3.88e-07 | 98 |
skeletal system | 5.50e-07 | 100 |