FFCP PHASE1:Hg19::chr3:58810185..58810229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463703,ENST00000482372,uc003dku.1_5end | |association_with_transcript=0bp_to_ENST00000463703,ENST00000482372,uc003dku.1_5end | ||
|cluster_id=chr3:58810185..58810229,+ | |||
|coexpression_cluster_id=C1482 | |coexpression_cluster_id=C1482 | ||
|description=CAGE_peak_1_at_ENST00000463703_5end,CAGE_peak_1_at_ENST00000482372_5end,CAGE_peak_1_at_uc003dku.1_5end | |description=CAGE_peak_1_at_ENST00000463703_5end,CAGE_peak_1_at_ENST00000482372_5end,CAGE_peak_1_at_uc003dku.1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.11e-18;82!UBERON:0010122;8.60e-12;2 | |ontology_enrichment_development_v019=UBERON:0006601;4.11e-18;82!UBERON:0010122;8.60e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-65!57;UBERON:0005068!1.55e-65!57;UBERON:0006241!1.55e-65!57;UBERON:0007135!1.55e-65!57;UBERON:0002780!2.26e-59!41;UBERON:0001890!2.26e-59!41;UBERON:0006240!2.26e-59!41;UBERON:0003080!1.00e-57!42;UBERON:0002020!1.63e-56!34;UBERON:0003528!1.63e-56!34;UBERON:0001893!2.24e-56!34;UBERON:0002791!2.43e-54!33;UBERON:0002616!5.16e-54!59;UBERON:0001869!6.97e-53!32;UBERON:0001017!1.69e-52!82;UBERON:0005743!1.08e-51!86;UBERON:0000073!1.05e-49!94;UBERON:0001016!1.05e-49!94;UBERON:0000955!8.55e-49!69;UBERON:0006238!8.55e-49!69;UBERON:0003075!2.54e-45!86;UBERON:0007284!2.54e-45!86;UBERON:0002346!7.88e-45!90;UBERON:0002619!2.66e-44!22;UBERON:0001950!6.52e-40!20;UBERON:0003056!7.59e-39!61;UBERON:0000956!2.30e-38!25;UBERON:0000203!2.30e-38!25;UBERON:0007023!1.49e-32!115;UBERON:0000033!1.19e-28!123;UBERON:0000924!3.20e-27!173;UBERON:0006601!3.20e-27!173;UBERON:0004121!6.01e-27!169;UBERON:0000153!1.08e-26!129;UBERON:0007811!1.08e-26!129;UBERON:0002420!3.90e-20!9;UBERON:0007245!3.90e-20!9;UBERON:0010009!3.90e-20!9;UBERON:0010011!3.90e-20!9;UBERON:0000454!3.90e-20!9;UBERON:0002308!1.40e-19!9;UBERON:0000125!1.40e-19!9;UBERON:0009663!1.03e-15!7;UBERON:0000200!4.32e-14!6;UBERON:0001871!5.24e-14!7;UBERON:0000025!9.88e-13!194;UBERON:0000349!1.36e-12!5;UBERON:0002021!1.65e-11!5;UBERON:0001872!2.10e-11!5;UBERON:0000369!1.73e-10!4;UBERON:0002435!1.73e-10!4;UBERON:0000204!1.73e-10!4;UBERON:0010082!1.73e-10!4;UBERON:0003076!5.35e-10!15;UBERON:0003057!5.35e-10!15;UBERON:0002298!2.78e-09!8;UBERON:0004111!1.77e-08!241;UBERON:0005383!2.41e-08!3;UBERON:0005382!2.41e-08!3;UBERON:0002771!3.83e-08!3;UBERON:0000988!1.96e-07!3;UBERON:0000064!3.60e-07!219;UBERON:0006331!3.91e-07!3;UBERON:0000475!3.95e-07!365;UBERON:0002240!5.59e-07!3;UBERON:0000483!9.16e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!1.55e-65!57;UBERON:0005068!1.55e-65!57;UBERON:0006241!1.55e-65!57;UBERON:0007135!1.55e-65!57;UBERON:0002780!2.26e-59!41;UBERON:0001890!2.26e-59!41;UBERON:0006240!2.26e-59!41;UBERON:0003080!1.00e-57!42;UBERON:0002020!1.63e-56!34;UBERON:0003528!1.63e-56!34;UBERON:0001893!2.24e-56!34;UBERON:0002791!2.43e-54!33;UBERON:0002616!5.16e-54!59;UBERON:0001869!6.97e-53!32;UBERON:0001017!1.69e-52!82;UBERON:0005743!1.08e-51!86;UBERON:0000073!1.05e-49!94;UBERON:0001016!1.05e-49!94;UBERON:0000955!8.55e-49!69;UBERON:0006238!8.55e-49!69;UBERON:0003075!2.54e-45!86;UBERON:0007284!2.54e-45!86;UBERON:0002346!7.88e-45!90;UBERON:0002619!2.66e-44!22;UBERON:0001950!6.52e-40!20;UBERON:0003056!7.59e-39!61;UBERON:0000956!2.30e-38!25;UBERON:0000203!2.30e-38!25;UBERON:0007023!1.49e-32!115;UBERON:0000033!1.19e-28!123;UBERON:0000924!3.20e-27!173;UBERON:0006601!3.20e-27!173;UBERON:0004121!6.01e-27!169;UBERON:0000153!1.08e-26!129;UBERON:0007811!1.08e-26!129;UBERON:0002420!3.90e-20!9;UBERON:0007245!3.90e-20!9;UBERON:0010009!3.90e-20!9;UBERON:0010011!3.90e-20!9;UBERON:0000454!3.90e-20!9;UBERON:0002308!1.40e-19!9;UBERON:0000125!1.40e-19!9;UBERON:0009663!1.03e-15!7;UBERON:0000200!4.32e-14!6;UBERON:0001871!5.24e-14!7;UBERON:0000025!9.88e-13!194;UBERON:0000349!1.36e-12!5;UBERON:0002021!1.65e-11!5;UBERON:0001872!2.10e-11!5;UBERON:0000369!1.73e-10!4;UBERON:0002435!1.73e-10!4;UBERON:0000204!1.73e-10!4;UBERON:0010082!1.73e-10!4;UBERON:0003076!5.35e-10!15;UBERON:0003057!5.35e-10!15;UBERON:0002298!2.78e-09!8;UBERON:0004111!1.77e-08!241;UBERON:0005383!2.41e-08!3;UBERON:0005382!2.41e-08!3;UBERON:0002771!3.83e-08!3;UBERON:0000988!1.96e-07!3;UBERON:0000064!3.60e-07!219;UBERON:0006331!3.91e-07!3;UBERON:0000475!3.95e-07!365;UBERON:0002240!5.59e-07!3;UBERON:0000483!9.16e-07!309 | ||
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|short_description=p1@ENST00000463703,p1@ENST00000482372,p1@uc003dku.1 | |short_description=p1@ENST00000463703,p1@ENST00000482372,p1@uc003dku.1 | ||
}} | }} |
Latest revision as of 23:00, 29 July 2015
Short description: | p1@ENST00000463703, p1@ENST00000482372, p1@uc003dku.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000463703_5end, CAGE_peak_1_at_ENST00000482372_5end, CAGE_peak_1_at_uc003dku.1_5end |
Coexpression cluster: | C1482_caudate_anaplastic_putamen_thalamus_small_diencephalon_nucleus |
Association with transcript: | 0bp_to_ENST00000463703, ENST00000482372, uc003dku.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data