FFCP PHASE1:Hg19::chr19:52408285..52408310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65251 | |EntrezGene=65251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25741 | |HGNC=25741 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BS31 | |UniProt=Q9BS31 | ||
|association_with_transcript=0bp_to_ENST00000354957,NM_023074_5end | |association_with_transcript=0bp_to_ENST00000354957,NM_023074_5end | ||
|cluster_id=chr19:52408285..52408310,- | |||
|coexpression_cluster_id=C3819 | |coexpression_cluster_id=C3819 | ||
|description=CAGE_peak_3_at_ZNF649_5end | |description=CAGE_peak_3_at_ZNF649_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.61e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.61e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-33!115;UBERON:0001049!1.14e-19!57;UBERON:0005068!1.14e-19!57;UBERON:0006241!1.14e-19!57;UBERON:0007135!1.14e-19!57;UBERON:0001017!3.93e-18!82;UBERON:0005743!4.48e-18!86;UBERON:0000073!6.79e-18!94;UBERON:0001016!6.79e-18!94;UBERON:0002616!4.46e-16!59;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0003080!1.72e-15!42;UBERON:0002346!9.39e-14!90;UBERON:0000955!1.09e-13!69;UBERON:0006238!1.09e-13!69;UBERON:0002020!1.61e-13!34;UBERON:0003528!1.61e-13!34;UBERON:0001893!1.98e-13!34;UBERON:0002791!4.49e-13!33;UBERON:0003075!8.59e-13!86;UBERON:0007284!8.59e-13!86;UBERON:0001869!3.01e-12!32;UBERON:0002619!6.20e-10!22;UBERON:0003056!2.03e-09!61;UBERON:0000956!3.01e-09!25;UBERON:0000203!3.01e-09!25;UBERON:0001950!6.00e-09!20;UBERON:0000924!2.82e-08!173;UBERON:0006601!2.82e-08!173;UBERON:0004121!1.38e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!3.69e-33!115;UBERON:0001049!1.14e-19!57;UBERON:0005068!1.14e-19!57;UBERON:0006241!1.14e-19!57;UBERON:0007135!1.14e-19!57;UBERON:0001017!3.93e-18!82;UBERON:0005743!4.48e-18!86;UBERON:0000073!6.79e-18!94;UBERON:0001016!6.79e-18!94;UBERON:0002616!4.46e-16!59;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0003080!1.72e-15!42;UBERON:0002346!9.39e-14!90;UBERON:0000955!1.09e-13!69;UBERON:0006238!1.09e-13!69;UBERON:0002020!1.61e-13!34;UBERON:0003528!1.61e-13!34;UBERON:0001893!1.98e-13!34;UBERON:0002791!4.49e-13!33;UBERON:0003075!8.59e-13!86;UBERON:0007284!8.59e-13!86;UBERON:0001869!3.01e-12!32;UBERON:0002619!6.20e-10!22;UBERON:0003056!2.03e-09!61;UBERON:0000956!3.01e-09!25;UBERON:0000203!3.01e-09!25;UBERON:0001950!6.00e-09!20;UBERON:0000924!2.82e-08!173;UBERON:0006601!2.82e-08!173;UBERON:0004121!1.38e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.39e-13;41!UBERON:0001890;8.39e-13;41!UBERON:0003528;9.91e-13;34!UBERON:0002020;9.91e-13;34!UBERON:0001893;1.03e-12;34!UBERON:0002791;3.74e-12;32!UBERON:0000073;4.04e-12;53!UBERON:0002616;4.04e-12;53!UBERON:0001869;5.72e-12;32!UBERON:0002619;7.24e-11;22!UBERON:0000956;3.87e-10;25!UBERON:0000203;3.87e-10;25!UBERON:0001950;7.20e-10;20!UBERON:0007023;9.76e-10;114!UBERON:0001016;9.82e-08;83!UBERON:0001017;9.90e-08;75 | |ontology_enrichment_uberon_v019=UBERON:0002780;8.39e-13;41!UBERON:0001890;8.39e-13;41!UBERON:0003528;9.91e-13;34!UBERON:0002020;9.91e-13;34!UBERON:0001893;1.03e-12;34!UBERON:0002791;3.74e-12;32!UBERON:0000073;4.04e-12;53!UBERON:0002616;4.04e-12;53!UBERON:0001869;5.72e-12;32!UBERON:0002619;7.24e-11;22!UBERON:0000956;3.87e-10;25!UBERON:0000203;3.87e-10;25!UBERON:0001950;7.20e-10;20!UBERON:0007023;9.76e-10;114!UBERON:0001016;9.82e-08;83!UBERON:0001017;9.90e-08;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.37e-34,114;UBERON:0001049,1.90e-20,56;UBERON:0005068,1.90e-20,56;UBERON:0006241,1.90e-20,56;UBERON:0007135,1.90e-20,56;UBERON:0000073,6.35e-19,53;UBERON:0002616,6.35e-19,53;UBERON:0001017,1.02e-18,81;UBERON:0001016,2.17e-18,89;UBERON:0002780,1.29e-16,41;UBERON:0001890,1.29e-16,41;UBERON:0003080,1.29e-16,41;UBERON:0006240,1.29e-16,41;UBERON:0002346,3.03e-15,86;UBERON:0003528,2.53e-14,34;UBERON:0002020,2.53e-14,34;UBERON:0001893,3.17e-14,34;UBERON:0003075,3.35e-14,82;UBERON:0007284,3.35e-14,82;UBERON:0000955,5.86e-14,68;UBERON:0006238,5.86e-14,68;UBERON:0002791,3.33e-13,32;UBERON:0001869,5.77e-13,32;UBERON:0010371,8.80e-12,104;UBERON:0003056,8.12e-11,61;UBERON:0002619,1.70e-10,22;UBERON:0000956,9.19e-10,25;UBERON:0000203,9.19e-10,25;UBERON:0001950,1.92e-09,20;UBERON:0004121,1.93e-08,171;UBERON:0000924,1.93e-08,171;UBERON:0006601,1.93e-08,171 | |||
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| ||
|short_description=p3@ZNF649 | |short_description=p3@ZNF649 | ||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p3@ZNF649 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF649_5end |
Coexpression cluster: | C3819_testicular_Mast_hepatoblastoma_endometrial_cerebellum_cord_H9 |
Association with transcript: | 0bp_to_ENST00000354957, NM_023074_5end |
EntrezGene: | ZNF649 |
HGNC: | 25741 |
UniProt: | Q9BS31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.37e-34 | 114 |
neural tube | 1.90e-20 | 56 |
neural rod | 1.90e-20 | 56 |
future spinal cord | 1.90e-20 | 56 |
neural keel | 1.90e-20 | 56 |
regional part of nervous system | 6.35e-19 | 53 |
regional part of brain | 6.35e-19 | 53 |
central nervous system | 1.02e-18 | 81 |
nervous system | 2.17e-18 | 89 |
regional part of forebrain | 1.29e-16 | 41 |
forebrain | 1.29e-16 | 41 |
anterior neural tube | 1.29e-16 | 41 |
future forebrain | 1.29e-16 | 41 |
neurectoderm | 3.03e-15 | 86 |
brain grey matter | 2.53e-14 | 34 |
gray matter | 2.53e-14 | 34 |
telencephalon | 3.17e-14 | 34 |
neural plate | 3.35e-14 | 82 |
presumptive neural plate | 3.35e-14 | 82 |
brain | 5.86e-14 | 68 |
future brain | 5.86e-14 | 68 |
regional part of telencephalon | 3.33e-13 | 32 |
cerebral hemisphere | 5.77e-13 | 32 |
ecto-epithelium | 8.80e-12 | 104 |
pre-chordal neural plate | 8.12e-11 | 61 |
regional part of cerebral cortex | 1.70e-10 | 22 |
cerebral cortex | 9.19e-10 | 25 |
pallium | 9.19e-10 | 25 |
neocortex | 1.92e-09 | 20 |
ectoderm-derived structure | 1.93e-08 | 171 |
ectoderm | 1.93e-08 | 171 |
presumptive ectoderm | 1.93e-08 | 171 |