FFCP PHASE1:Hg19::chr22:31003261..31003302,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:31003261..31003302,+
|short_description=p2@TCN2
|description=CAGE_peak_2_at_TCN2_5end
|association_with_transcript=70bp_to_ENST00000407817_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6948 | |EntrezGene=6948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |HGNC=11653 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FD4 | |UniProt=Q96FD4 | ||
|association_with_transcript=70bp_to_ENST00000407817_5end | |||
|cluster_id=chr22:31003261..31003302,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_TCN2_5end | |||
|id=chr22:31003261..31003302,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.17e-20!35;CL:0002057!1.55e-17!42;CL:0002078!1.21e-15!44;CL:0002139!6.74e-15!24;CL:0000860!1.54e-14!45;CL:0000557!1.95e-14!71;CL:0002009!9.85e-14!65;CL:0000839!3.21e-13!70;CL:0002194!3.57e-13!63;CL:0000576!3.57e-13!63;CL:0000040!3.57e-13!63;CL:0000559!3.57e-13!63;CL:0000766!5.25e-13!76;CL:0000071!1.09e-11!18;CL:0002546!1.09e-11!18;CL:0000213!2.44e-09!57;CL:0000215!2.44e-09!57;CL:1000497!1.63e-08!18;CL:0002518!1.63e-08!18;CL:1000449!2.23e-07!16;CL:1000413!9.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.78e-20;36!CL:0000860;5.77e-17;33!CL:0002057;5.77e-17;33!CL:0002139;8.04e-17;24!CL:0000473;2.10e-15;39!CL:0000234;2.10e-15;39!CL:0000071;3.82e-13;18!CL:0000576;7.60e-13;48!CL:0002078;3.50e-12;45!CL:1000497;3.74e-09;17!CL:0002518;3.74e-09;17!CL:0000766;3.87e-09;69!CL:0000213;6.36e-08;58!CL:0000215;6.36e-08;58!CL:1000449;7.31e-08;15!CL:1000413;1.62e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.56e-24,36;CL:0000473,5.90e-21,48;CL:0000234,5.90e-21,48;CL:0000860,2.54e-19,42;CL:0002057,2.54e-19,42;CL:0002078,1.61e-18,45;CL:0000557,8.38e-18,67;CL:0002009,7.81e-17,61;CL:0002139,9.13e-17,24;CL:0000839,1.58e-16,66;CL:0002194,3.50e-16,59;CL:0000576,3.50e-16,59;CL:0000040,3.50e-16,59;CL:0000559,3.50e-16,59;CL:0000766,3.94e-16,72;CL:0000071,4.15e-13,18;CL:0002546,4.15e-13,18;CL:0000213,7.26e-12,58;CL:0000215,7.26e-12,58;CL:1000497,3.20e-09,17;CL:0002518,3.20e-09,17;CL:1000449,6.34e-08,15;CL:1000413,1.66e-07,9;CL:0002681,8.12e-07,12;CL:0002584,8.12e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-14;42!CL:0002546;3.82e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.49e-18!216;UBERON:0000480!2.45e-17!626;UBERON:0000467!3.51e-17!625;UBERON:0000468!5.29e-17!659;UBERON:0002405!5.76e-16!115;UBERON:0000922!4.08e-15!612;UBERON:0002050!2.03e-14!605;UBERON:0005423!2.03e-14!605;UBERON:0000923!2.86e-14!604;UBERON:0005291!2.86e-14!604;UBERON:0006598!2.86e-14!604;UBERON:0002532!2.86e-14!604;UBERON:0000025!5.35e-14!194;UBERON:0000062!1.23e-13!511;UBERON:0004111!1.71e-13!241;UBERON:0000119!1.39e-12!312;UBERON:0000477!1.87e-12!286;UBERON:0002371!1.97e-12!80;UBERON:0002049!7.50e-12!79;UBERON:0007798!7.50e-12!79;UBERON:0001986!1.09e-11!18;UBERON:0004638!1.09e-11!18;UBERON:0004852!1.09e-11!18;UBERON:0002193!1.11e-11!112;UBERON:0000483!1.47e-11!309;UBERON:0001009!5.16e-11!113;UBERON:0001474!1.53e-10!86;UBERON:0007023!2.38e-10!115;UBERON:0004535!3.86e-10!110;UBERON:0003914!4.18e-10!118;UBERON:0000487!2.42e-09!22;UBERON:0000926!4.39e-09!448;UBERON:0004120!4.39e-09!448;UBERON:0006603!4.39e-09!448;UBERON:0000479!4.41e-09!787;UBERON:0003075!5.19e-09!86;UBERON:0007284!5.19e-09!86;UBERON:0002616!1.14e-08!59;UBERON:0002390!1.89e-08!102;UBERON:0003061!1.89e-08!102;UBERON:0004765!2.79e-08!101;UBERON:0001434!2.79e-08!101;UBERON:0000955!5.36e-08!69;UBERON:0006238!5.36e-08!69;UBERON:0003103!6.56e-08!69;UBERON:0000055!8.59e-08!69;UBERON:0002346!9.93e-08!90;UBERON:0006555!1.12e-07!17;UBERON:0005103!1.12e-07!17;UBERON:0000083!1.12e-07!17;UBERON:0009201!1.12e-07!17;UBERON:0004819!1.12e-07!17;UBERON:0006553!1.12e-07!17;UBERON:0003074!1.12e-07!17;UBERON:0003060!1.12e-07!17;UBERON:0004876!1.21e-07!20;UBERON:0000080!1.73e-07!18;UBERON:0002120!1.73e-07!18;UBERON:0004875!1.73e-07!18;UBERON:0005721!1.73e-07!18;UBERON:0005754!1.73e-07!18;UBERON:0007297!1.73e-07!18;UBERON:0004211!2.23e-07!16;UBERON:0001285!2.23e-07!16;UBERON:0007684!2.23e-07!16;UBERON:0003220!2.23e-07!16;UBERON:0004208!2.23e-07!16;UBERON:0003887!2.42e-07!21;UBERON:0002204!2.87e-07!167;UBERON:0006914!3.06e-07!25;UBERON:0001049!3.20e-07!57;UBERON:0005068!3.20e-07!57;UBERON:0006241!3.20e-07!57;UBERON:0007135!3.20e-07!57;UBERON:0002200!6.18e-07!11;UBERON:0006876!6.18e-07!11;UBERON:0000489!8.84e-07!32;UBERON:0003915!9.00e-07!9;UBERON:0004700!9.00e-07!9;UBERON:0001917!9.00e-07!9;UBERON:0003056!9.91e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.82e-13;18!UBERON:0001986;3.82e-13;18!UBERON:0004852;3.82e-13;18!UBERON:0000487;2.01e-10;22!UBERON:0000490;2.23e-08;33!UBERON:0006914;4.79e-08;25!UBERON:0006555;7.31e-08;15!UBERON:0004819;7.31e-08;15!UBERON:0001285;7.31e-08;15!UBERON:0007684;7.31e-08;15!UBERON:0006876;1.16e-07;11!UBERON:0003915;1.62e-07;9!UBERON:0004700;1.62e-07;9!UBERON:0001917;1.62e-07;9!UBERON:0000353;4.21e-07;15!UBERON:0000489;9.58e-07;29!UBERON:0002465;9.73e-07;10 | |||
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| ||
|short_description=p2@TCN2 | |||
}} | }} |
Latest revision as of 18:42, 19 September 2015
Short description: | p2@TCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 70bp_to_ENST00000407817_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | Q96FD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.56e-24 | 36 |
defensive cell | 5.90e-21 | 48 |
phagocyte | 5.90e-21 | 48 |
classical monocyte | 2.54e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-19 | 42 |
meso-epithelial cell | 1.61e-18 | 45 |
granulocyte monocyte progenitor cell | 8.38e-18 | 67 |
macrophage dendritic cell progenitor | 7.81e-17 | 61 |
endothelial cell of vascular tree | 9.13e-17 | 24 |
myeloid lineage restricted progenitor cell | 1.58e-16 | 66 |
monopoietic cell | 3.50e-16 | 59 |
monocyte | 3.50e-16 | 59 |
monoblast | 3.50e-16 | 59 |
promonocyte | 3.50e-16 | 59 |
myeloid leukocyte | 3.94e-16 | 72 |
blood vessel endothelial cell | 4.15e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.15e-13 | 18 |
lining cell | 7.26e-12 | 58 |
barrier cell | 7.26e-12 | 58 |
kidney cell | 3.20e-09 | 17 |
kidney epithelial cell | 3.20e-09 | 17 |
epithelial cell of nephron | 6.34e-08 | 15 |
endothelial cell of artery | 1.66e-07 | 9 |
kidney cortical cell | 8.12e-07 | 12 |
renal cortical epithelial cell | 8.12e-07 | 12 |