FFCP PHASE1:Hg19::chr22:37531413..37531430,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:37531413..37531430,-
|short_description=p@chr22:37531413..37531430,-
|description=CAGE_peak_at_chr22:37531413..37531430,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:37531413..37531430,- | |||
|coexpression_cluster_id=C4096 | |||
|description=CAGE_peak_at_chr22:37531413..37531430,- | |||
|id=chr22:37531413..37531430,- | |||
|ontology_enrichment_celltype=CL:0000838!1.18e-22!52;CL:0000542!4.44e-22!53;CL:0000051!4.44e-22!53;CL:0000084!2.47e-19!25;CL:0000827!2.47e-19!25;CL:0000791!2.31e-15!18;CL:0000789!2.31e-15!18;CL:0002420!2.31e-15!18;CL:0002419!2.31e-15!18;CL:0000790!2.31e-15!18;CL:0002087!2.74e-14!119;CL:0000080!6.10e-14!6;CL:0000738!1.51e-11!140;CL:0002031!2.17e-10!124;CL:0000988!4.61e-10!182;CL:0000624!1.84e-09!6;CL:0000037!5.99e-09!172;CL:0000566!5.99e-09!172;CL:0000623!2.47e-08!3;CL:0000825!2.47e-08!3;CL:0000842!6.36e-08!3;CL:0002541!8.92e-08!3;CL:0002032!1.49e-07!165;CL:0000837!1.49e-07!165;CL:0000625!6.64e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.93e-20;3!CL:0000084;7.36e-15;25!CL:0000542;1.45e-11;53!CL:0000624;1.06e-09;6!CL:0002541;1.73e-09;3!CL:0000226;2.05e-09;3!CL:0000842;2.05e-09;3!CL:0000791;1.88e-08;18!CL:0000789;1.88e-08;18!CL:0002419;1.88e-08;18!CL:0000946;9.74e-08;1!CL:0000786;9.74e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.77e-24,52;CL:0000542,5.84e-24,53;CL:0000051,5.84e-24,53;CL:0000623,2.95e-20,3;CL:0000825,2.95e-20,3;CL:0000084,6.89e-15,25;CL:0000827,6.89e-15,25;CL:0002087,5.28e-14,115;CL:0000738,2.72e-11,136;CL:0002031,3.76e-10,120;CL:0000988,4.24e-10,177;CL:0000624,1.12e-09,6;CL:0002541,1.81e-09,3;CL:0000226,1.97e-09,3;CL:0000842,1.97e-09,3;CL:0000037,1.83e-08,168;CL:0000791,1.88e-08,18;CL:0000789,1.88e-08,18;CL:0002420,1.88e-08,18;CL:0002419,1.88e-08,18;CL:0000790,1.88e-08,18;CL:0000946,9.44e-08,1;CL:0000786,9.44e-08,1;CL:0000980,9.44e-08,1;CL:0002032,8.79e-07,161;CL:0000837,8.79e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.45e-11;53!CL:0000790;1.88e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.74e-08;1!DOID:0060061;9.74e-08;1!DOID:8691;9.74e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.84e-08,1;DOID:0060061,8.84e-08,1;DOID:8691,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.96e-23!15;UBERON:0000179!2.96e-23!15;UBERON:0000463!2.96e-23!15;UBERON:0004177!2.32e-09!7;UBERON:0002390!7.39e-08!102;UBERON:0003061!7.39e-08!102;UBERON:0000476!8.92e-08!3;UBERON:0000920!8.92e-08!3;UBERON:0002193!2.97e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-19;15!UBERON:0000179;1.23e-19;15!UBERON:0000463;1.23e-19;15!UBERON:0003124;1.73e-09;3!UBERON:0000920;1.73e-09;3!UBERON:0002390;6.36e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.66e-19,15;UBERON:0000179,1.66e-19,15;UBERON:0000463,1.66e-19,15;UBERON:0000920,1.81e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.61242593579761,3.22714203386085,0,0,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,1.30206522429511,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,1.23360899399706,1.17030546773475,0.651844533267181,0,0,2.00538822393312,1.47302953737419,0,1.62482318259009,2.43373507478783,3.38154303655683,0.986627427622057,0.276350017785848,0,0.14828656316206,0,0,0.906474741580529,0,0,0.506039384039006,0,0,0,0.451725357233318,0.511946444617674,2.49861453104692,0,0,0.604820229674197,2.94184215361858,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.97030760201927,6.03757209606648,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,3.45142721309787,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,2.27858874869665,0.238231775457789,0.411362273086194,0,1.08006287447623,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,1.31843099381408,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,1.27600463892768,0.457987967009312,5.86338253620498,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,0,1.18608451472249,0.741383633679017,1.46190729307638,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,2.65038171378292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.61242593579761,3.22714203386085,0,0,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,1.30206522429511,0,0,0,0.436194716338694,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,1.23360899399706,1.17030546773475,0.651844533267181,0,0,2.00538822393312,1.47302953737419,0,1.62482318259009,2.43373507478783,3.38154303655683,0.986627427622057,0.276350017785848,0,0.14828656316206,0,0,0.906474741580529,0,0,0.506039384039006,0,0,0,0.451725357233318,0.511946444617674,2.49861453104692,0,0,0.604820229674197,2.94184215361858,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.97030760201927,6.03757209606648,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,3.45142721309787,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,2.27858874869665,0.238231775457789,0.411362273086194,0,1.08006287447623,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,1.31843099381408,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,1.27600463892768,0.457987967009312,5.86338253620498,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,0,1.18608451472249,0.741383633679017,1.46190729307638,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,2.65038171378292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr22:37531413..37531430,- | |||
}} | }} |
Latest revision as of 20:53, 28 July 2015
Short description: | p@chr22:37531413..37531430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37531413..37531430, - |
Coexpression cluster: | C4096_chorionic_Natural_mycosis_hairy_cord_CD4_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.77e-24 | 52 |
lymphocyte | 5.84e-24 | 53 |
common lymphoid progenitor | 5.84e-24 | 53 |
natural killer cell | 2.95e-20 | 3 |
pro-NK cell | 2.95e-20 | 3 |
T cell | 6.89e-15 | 25 |
pro-T cell | 6.89e-15 | 25 |
nongranular leukocyte | 5.28e-14 | 115 |
leukocyte | 2.72e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 3.76e-10 | 120 |
hematopoietic cell | 4.24e-10 | 177 |
CD4-positive, alpha-beta T cell | 1.12e-09 | 6 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
single nucleate cell | 1.97e-09 | 3 |
mononuclear cell | 1.97e-09 | 3 |
hematopoietic stem cell | 1.83e-08 | 168 |
mature alpha-beta T cell | 1.88e-08 | 18 |
alpha-beta T cell | 1.88e-08 | 18 |
immature T cell | 1.88e-08 | 18 |
mature T cell | 1.88e-08 | 18 |
immature alpha-beta T cell | 1.88e-08 | 18 |
antibody secreting cell | 9.44e-08 | 1 |
plasma cell | 9.44e-08 | 1 |
plasmablast | 9.44e-08 | 1 |
hematopoietic oligopotent progenitor cell | 8.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.79e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.66e-19 | 15 |
haemolymphatic fluid | 1.66e-19 | 15 |
organism substance | 1.66e-19 | 15 |
egg chorion | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.84e-08 | 1 |
cutaneous T cell lymphoma | 8.84e-08 | 1 |
mycosis fungoides | 8.84e-08 | 1 |