FFCP PHASE1:Hg19::chr2:114299044..114299050,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:114299044..114299050,+
|short_description=p1@ENST00000421970
|description=CAGE_peak_1_at_ENST00000421970_5end
|association_with_transcript=-463bp_to_ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-463bp_to_ENST00000421970_5end | |||
|cluster_id=chr2:114299044..114299050,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_ENST00000421970_5end | |||
|id=chr2:114299044..114299050,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;3.14e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,6.84e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.97e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.70e-44!115;UBERON:0005743!3.23e-13!86;UBERON:0000955!3.66e-12!69;UBERON:0006238!3.66e-12!69;UBERON:0002346!8.37e-12!90;UBERON:0001049!1.18e-11!57;UBERON:0005068!1.18e-11!57;UBERON:0006241!1.18e-11!57;UBERON:0007135!1.18e-11!57;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0001017!8.20e-11!82;UBERON:0002616!9.02e-11!59;UBERON:0000073!9.33e-11!94;UBERON:0001016!9.33e-11!94;UBERON:0000062!1.72e-09!511;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0003101!9.20e-08!22;UBERON:0000079!9.20e-08!22;UBERON:0002780!9.59e-08!41;UBERON:0001890!9.59e-08!41;UBERON:0006240!9.59e-08!41;UBERON:0000162!1.53e-07!14;UBERON:0001353!1.53e-07!14;UBERON:0000163!1.53e-07!14;UBERON:0006866!1.53e-07!14;UBERON:0000164!1.53e-07!14;UBERON:0000931!1.53e-07!14;UBERON:0000033!1.84e-07!123;UBERON:0000481!1.93e-07!347;UBERON:0003080!2.03e-07!42;UBERON:0001046!2.17e-07!19;UBERON:0003937!3.58e-07!12;UBERON:0005399!3.58e-07!12;UBERON:0000468!3.71e-07!659;UBERON:0000475!5.27e-07!365;UBERON:0003056!7.08e-07!61;UBERON:0004122!7.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;4.41e-12;12!UBERON:0005399;4.41e-12;12!UBERON:0003296;9.45e-10;4!UBERON:0010133;9.45e-10;4!UBERON:0002367;1.97e-09;11!UBERON:0010147;1.97e-09;11!UBERON:0001905;3.97e-09;2!UBERON:0002757;3.97e-09;2!UBERON:0010134;3.97e-09;2!UBERON:0005408;3.97e-09;2!UBERON:0001899;3.97e-09;2!UBERON:0003101;2.12e-08;22!UBERON:0000079;2.12e-08;22!UBERON:0000160;7.74e-08;17!UBERON:0000922;2.85e-07;49!UBERON:0000077;8.73e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,4.09e-14,14;UBERON:0001353,4.09e-14,14;UBERON:0000163,4.09e-14,14;UBERON:0006866,4.09e-14,14;UBERON:0000164,4.09e-14,14;UBERON:0000931,4.09e-14,14;UBERON:0007023,5.98e-14,114;UBERON:0001046,2.76e-13,19;UBERON:0004122,4.16e-13,15;UBERON:0003937,5.49e-12,12;UBERON:0005399,5.49e-12,12;UBERON:0003064,1.29e-10,28;UBERON:0003296,7.02e-10,4;UBERON:0010133,7.02e-10,4;UBERON:0001905,1.89e-09,2;UBERON:0002757,1.89e-09,2;UBERON:0010134,1.89e-09,2;UBERON:0005408,1.89e-09,2;UBERON:0001899,1.89e-09,2;UBERON:0002367,2.19e-09,11;UBERON:0010147,2.19e-09,11;UBERON:0009846,2.19e-09,11;UBERON:0003353,2.19e-09,11;UBERON:0004902,2.19e-09,11;UBERON:0003820,2.19e-09,11;UBERON:0009847,2.19e-09,11;UBERON:0003101,2.45e-08,22;UBERON:0000079,2.45e-08,22;UBERON:0000160,8.15e-08,17;UBERON:0005156,1.16e-07,59;UBERON:0000990,1.16e-07,59;UBERON:0001008,7.07e-07,48 | |||
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| ||
|short_description=p1@ENST00000421970 | |||
}} | }} |
Latest revision as of 23:39, 28 July 2015
Short description: | p1@ENST00000421970 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000421970_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -463bp_to_ENST00000421970_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 6.84e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
cloaca | 4.09e-14 | 14 |
anal region | 4.09e-14 | 14 |
embryonic cloaca | 4.09e-14 | 14 |
terminal part of digestive tract | 4.09e-14 | 14 |
primitive urogenital sinus | 4.09e-14 | 14 |
proctodeum | 4.09e-14 | 14 |
adult organism | 5.98e-14 | 114 |
hindgut | 2.76e-13 | 19 |
genitourinary system | 4.16e-13 | 15 |
sex gland | 5.49e-12 | 12 |
male reproductive gland | 5.49e-12 | 12 |
intermediate mesoderm | 1.29e-10 | 28 |
gland of diencephalon | 7.02e-10 | 4 |
neuroendocrine gland | 7.02e-10 | 4 |
pineal body | 1.89e-09 | 2 |
regional part of epithalamus | 1.89e-09 | 2 |
secretory circumventricular organ | 1.89e-09 | 2 |
circumventricular organ | 1.89e-09 | 2 |
epithalamus | 1.89e-09 | 2 |
prostate gland | 2.19e-09 | 11 |
male accessory sex gland | 2.19e-09 | 11 |
embryonic cloacal epithelium | 2.19e-09 | 11 |
epithelium of hindgut | 2.19e-09 | 11 |
urogenital sinus epithelium | 2.19e-09 | 11 |
prostate bud | 2.19e-09 | 11 |
prostate field | 2.19e-09 | 11 |
male organism | 2.45e-08 | 22 |
male reproductive system | 2.45e-08 | 22 |
intestine | 8.15e-08 | 17 |
reproductive structure | 1.16e-07 | 59 |
reproductive system | 1.16e-07 | 59 |
renal system | 7.07e-07 | 48 |