Personal tools

FFCP PHASE1:Mm9::chr16:94550031..94550046,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170765
|EntrezGene=170765
|HGNC=
|HGNC=
|MCL_coexpression_id=94
|MCL_coexpression_id=94
|TSSclassifier=NA
|UniProt=B8JK62,Q924S9
|UniProt=B8JK62,Q924S9
|association_with_transcript=2bp_to_NM_133229,uc008aaj.2_5end
|association_with_transcript=2bp_to_NM_133229,uc008aaj.2_5end
|cluster_id=chr16:94550031..94550046,+
|description=CAGE_peak_1_at_Ripply3_5end
|description=CAGE_peak_1_at_Ripply3_5end
|id=chr16:94550031..94550046,+
|id=chr16:94550031..94550046,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!6.17e-11!14;UBERON:0000117!6.17e-11!14;UBERON:0000171!6.17e-11!14;UBERON:0000170!6.17e-11!14;UBERON:0005597!6.17e-11!14;UBERON:0000118!6.17e-11!14;UBERON:0005178!1.23e-10!17;UBERON:0005181!1.23e-10!17;UBERON:0002224!1.23e-10!17;UBERON:0000915!1.23e-10!17;UBERON:0008947!1.23e-10!17;UBERON:0003258!1.23e-10!17;UBERON:0005153!8.15e-09!17;UBERON:0009569!6.42e-08!66;UBERON:0005177!1.31e-07!85
|ontology_enrichment_uberon=UBERON:0002048!6.17e-11!14;UBERON:0000117!6.17e-11!14;UBERON:0000171!6.17e-11!14;UBERON:0000170!6.17e-11!14;UBERON:0005597!6.17e-11!14;UBERON:0000118!6.17e-11!14;UBERON:0005178!1.23e-10!17;UBERON:0005181!1.23e-10!17;UBERON:0002224!1.23e-10!17;UBERON:0000915!1.23e-10!17;UBERON:0008947!1.23e-10!17;UBERON:0003258!1.23e-10!17;UBERON:0005153!8.15e-09!17;UBERON:0009569!6.42e-08!66;UBERON:0005177!1.31e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.43e-18,14;UBERON:0000117,1.43e-18,14;UBERON:0000171,1.43e-18,14;UBERON:0000170,1.43e-18,14;UBERON:0005597,1.43e-18,14;UBERON:0000118,1.43e-18,14;UBERON:0005178,1.92e-16,17;UBERON:0005181,1.92e-16,17;UBERON:0002224,1.92e-16,17;UBERON:0000915,1.92e-16,17;UBERON:0008947,1.92e-16,17;UBERON:0003258,1.92e-16,17;UBERON:0005153,1.99e-14,17;UBERON:0005157,1.49e-11,20;UBERON:0005177,2.40e-10,79;UBERON:0009569,6.99e-09,66;UBERON:0000310,2.71e-08,6;UBERON:0001443,2.71e-08,6;UBERON:0002100,7.09e-08,90;UBERON:0000970,5.37e-07,9;UBERON:0000019,5.37e-07,9;UBERON:0000047,5.37e-07,9;UBERON:0010312,5.37e-07,9;UBERON:0004088,5.37e-07,9;UBERON:0002104,5.37e-07,9;UBERON:0001456,5.37e-07,9;UBERON:0003072,5.37e-07,9;UBERON:0004128,5.37e-07,9;UBERON:0003071,5.37e-07,9
|phase1_expression=0,0,0,0,0,0.503637815735669,0.467225281191051,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,3.656861476496,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0,0,0,0,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0,0,0,1.12552522006336,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,23.4790235848359,3.44169550792555,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.91347103775248,0,2.52351636410202,0.173485326766136,0.913396434936424,0,0.150722640552623,0.470354828542819,0.753999547978053,0,1.3013942122792,0.884610551949874,0.323533699894818,0,0.969750506270444,0,0.585561594023094,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,7.57590681191306,0.910843100738926,1.14951052216736,1.26043490863744,1.20563854268572,1.83698547708585,2.0498195245576,2.15513966487376,1.55222022443409,0.215567992932842,0.189106080167819,0.879755620819744,1.09597866213787,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.946978942340841,0.787056926989615,0.462801338662135,0.232533944750408,0.536546802799238,1.16765342367169,0.329119699826961,0.656669856316381,0.486412857275134,1.31579988682799,0.439100230582101,1.74468344388483,0,0.205809224758569,0,0,0.426576501070468,1.39342003116263,0.515469845288373,0.605050573870028,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0,0.779856348476481,0,0.216138049874694,0.398282546508734,1.89667900953082,1.02823661348756,1.1270773567308,2.03651327845314,1.35766741017338,1.61312385747733,1.45444035385792,2.36176236767363,2.35498091762062,2.83813477020141,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,1.24815069245824,0.505157755894224,0.896987067609561,0,19.9533445379933,1.89491411770485,2.93336957595647,3.56464680127895,4.22442446919304,4.52266895092903,4.99891645860629,20.2938993772111,9.45810864637146,16.6098517236581,19.4534817762134,15.0754249538479,16.9231282228578,24.0117437245309,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,1.31976098378028,0,1.21390318077491,0.906970670894253,1.88605079755898,0.590603785761546,2.76691633149535,1.03371317267288,1.45413491791002,2.13898427030833,0.632073515871632,0,0,2.38307724027652,1.08036656418786,2.8458910432206,5.78709994585299,4.07882537377229,0.891844088010353,0.493647061806363,0,0.704015124191131,0.63549621259146,0.220528398054962,0.98931751764888,0.484393280087717,1.68876189798836,0.716234064018819,0.328281799490123,0.582961673259701,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0,0.509935289981566,0,0,5.72802370809068,0.474503990371703,0.813277868507395,1.72808545314882,2.29997125615916,2.18362563746178,1.34864346384821,1.90102948168273,4.18809507174447,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.810900861160657,0.410843828659309,0.649604114888975,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0.0897138566094757,0.335769232728157,0.386379188064381,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.682934423016537,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,1.23621034343337,0,1.26348605881899,0.25347929989024,1.32038438970253,0.749132059759059,0.768301828858431,0.689225627467359,0.476293691283074,1.15884325944855,0.38581844092741,1.64834360321323,1.03039244094078,1.37147700954166,1.06485483695602,0.238436189947321,0.726732083161643,0.941093804153306,0.676916863133412,0.548783918618318,1.05227884575137,1.7654534799962,0,1.06771516311757,1.0835493061312,1.63692417267876,1.23949472948773,0.771626443924566,0,0.935726433781634,1.28922632428979,0.382576664137687,0.882365676478062,0
|phase1_expression=0,0,0,0,0,0.503637815735669,0.467225281191051,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,3.656861476496,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0,0,0,0,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0,0,0,1.12552522006336,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,23.4790235848359,3.44169550792555,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.91347103775248,0,2.52351636410202,0.173485326766136,0.913396434936424,0,0.150722640552623,0.470354828542819,0.753999547978053,0,1.3013942122792,0.884610551949874,0.323533699894818,0,0.969750506270444,0,0.585561594023094,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,7.57590681191306,0.910843100738926,1.14951052216736,1.26043490863744,1.20563854268572,1.83698547708585,2.0498195245576,2.15513966487376,1.55222022443409,0.215567992932842,0.189106080167819,0.879755620819744,1.09597866213787,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.946978942340841,0.787056926989615,0.462801338662135,0.232533944750408,0.536546802799238,1.16765342367169,0.329119699826961,0.656669856316381,0.486412857275134,1.31579988682799,0.439100230582101,1.74468344388483,0,0.205809224758569,0,0,0.426576501070468,1.39342003116263,0.515469845288373,0.605050573870028,0.667134131534611,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0,0.779856348476481,0,0.216138049874694,0.398282546508734,1.89667900953082,1.02823661348756,1.1270773567308,2.03651327845314,1.35766741017338,1.61312385747733,1.45444035385792,2.36176236767363,2.35498091762062,2.83813477020141,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,1.24815069245824,0.505157755894224,0.896987067609561,0,19.9533445379933,1.89491411770485,2.93336957595647,3.56464680127895,4.22442446919304,4.52266895092903,4.99891645860629,20.2938993772111,9.45810864637146,16.6098517236581,19.4534817762134,15.0754249538479,16.9231282228578,24.0117437245309,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.651547837414304,1.31976098378028,0,1.21390318077491,0.906970670894253,1.88605079755898,0.590603785761546,2.76691633149535,1.03371317267288,1.45413491791002,2.13898427030833,0.632073515871632,0,0,2.38307724027652,1.08036656418786,2.8458910432206,5.78709994585299,4.07882537377229,0.891844088010353,0.493647061806363,0,0.704015124191131,0.63549621259146,0.220528398054962,0.98931751764888,0.484393280087717,1.68876189798836,0.716234064018819,0.328281799490123,0.582961673259701,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0,0.509935289981566,0,0,5.72802370809068,0.474503990371703,0.813277868507395,1.72808545314882,2.29997125615916,2.18362563746178,1.34864346384821,1.90102948168273,4.18809507174447,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.810900861160657,0.410843828659309,0.649604114888975,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0.0897138566094757,0.335769232728157,0.386379188064381,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.682934423016537,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,1.23621034343337,0,1.26348605881899,0.25347929989024,1.32038438970253,0.749132059759059,0.768301828858431,0.689225627467359,0.476293691283074,1.15884325944855,0.38581844092741,1.64834360321323,1.03039244094078,1.37147700954166,1.06485483695602,0.238436189947321,0.726732083161643,0.941093804153306,0.676916863133412,0.548783918618318,1.05227884575137,1.7654534799962,0,1.06771516311757,1.0835493061312,1.63692417267876,1.23949472948773,0.771626443924566,0,0.935726433781634,1.28922632428979,0.382576664137687,0.882365676478062,0
|short_description=p1@Ripply3
|short_description=p1@Ripply3
}}
}}

Latest revision as of 21:30, 25 September 2015

Short description:p1@Ripply3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ripply3_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 2bp_to_NM_133229, uc008aaj.2_5end
EntrezGene:Ripply3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ripply3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B119.95
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C620.29
lung, neonate N06.CNhs11212.683-20E59.46
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A415.08
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H224.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung1.43e-1814
respiratory tube1.43e-1814
respiration organ1.43e-1814
pair of lungs1.43e-1814
lung primordium1.43e-1814
lung bud1.43e-1814
thoracic cavity element1.92e-1617
thoracic segment organ1.92e-1617
thoracic cavity1.92e-1617
thoracic segment of trunk1.92e-1617
respiratory primordium1.92e-1617
endoderm of foregut1.92e-1617
epithelial bud1.99e-1417
epithelial fold1.49e-1120
trunk region element2.40e-1079
subdivision of trunk6.99e-0966
breast2.71e-086
chest2.71e-086
trunk7.09e-0890
eye5.37e-079
camera-type eye5.37e-079
simple eye5.37e-079
immature eye5.37e-079
ocular region5.37e-079
visual system5.37e-079
face5.37e-079
optic cup5.37e-079
optic vesicle5.37e-079
eye primordium5.37e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:94550031..94550046,%2B&oldid=4215169"