FFCP PHASE1:Hg19::chr2:162757013..162757026,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:162757013..162757026,+
|short_description=p@chr2:162757013..162757026,+
|description=CAGE_peak_at_chr2:162757013..162757026,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:162757013..162757026,+ | |||
|coexpression_cluster_id=C1498 | |||
|description=CAGE_peak_at_chr2:162757013..162757026,+ | |||
|id=chr2:162757013..162757026,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.72e-35!11;CL:0000791!1.74e-35!18;CL:0000789!1.74e-35!18;CL:0002420!1.74e-35!18;CL:0002419!1.74e-35!18;CL:0000790!1.74e-35!18;CL:0000084!1.13e-24!25;CL:0000827!1.13e-24!25;CL:0000838!4.27e-16!52;CL:0000542!1.02e-15!53;CL:0000051!1.02e-15!53;CL:0000738!4.38e-15!140;CL:0002087!4.66e-13!119;CL:0000623!1.23e-12!3;CL:0000825!1.23e-12!3;CL:0000842!1.74e-12!3;CL:0000037!4.73e-11!172;CL:0000566!4.73e-11!172;CL:0000988!4.35e-10!182;CL:0000893!1.47e-09!2;CL:0002489!1.47e-09!2;CL:0000809!1.47e-09!2;CL:0000808!1.47e-09!2;CL:0000894!1.47e-09!2;CL:0000806!1.47e-09!2;CL:0000807!1.47e-09!2;CL:0000805!1.47e-09!2;CL:0002425!1.47e-09!2;CL:0000224!1.80e-09!4;CL:0000771!3.04e-09!2;CL:0002031!7.41e-09!124;CL:0002032!9.05e-09!165;CL:0000837!9.05e-09!165;CL:0000094!4.99e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.64e-57;11!CL:0000791;2.70e-54;18!CL:0000789;2.70e-54;18!CL:0002419;2.70e-54;18!CL:0000084;9.56e-39;25!CL:0000771;7.04e-21;2!CL:0000542;7.12e-12;53!CL:0000895;9.57e-12;1!CL:0002127;1.18e-11;1!CL:0000911;1.18e-11;1!CL:0000814;1.18e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.73e-57,11;CL:0000791,2.29e-54,18;CL:0000789,2.29e-54,18;CL:0002420,2.29e-54,18;CL:0002419,2.29e-54,18;CL:0000790,2.29e-54,18;CL:0000084,8.49e-39,25;CL:0000827,8.49e-39,25;CL:0000838,7.51e-22,52;CL:0000893,1.25e-21,2;CL:0002489,1.25e-21,2;CL:0000809,1.25e-21,2;CL:0000808,1.25e-21,2;CL:0000894,1.25e-21,2;CL:0000806,1.25e-21,2;CL:0000807,1.25e-21,2;CL:0000805,1.25e-21,2;CL:0002425,1.25e-21,2;CL:0000542,2.08e-21,53;CL:0000051,2.08e-21,53;CL:0000771,7.79e-21,2;CL:0000738,3.51e-14,136;CL:0002087,1.23e-12,115;CL:0000810,9.57e-12,1;CL:0000895,9.57e-12,1;CL:0002436,9.57e-12,1;CL:0002427,9.57e-12,1;CL:0002428,9.57e-12,1;CL:0002429,9.57e-12,1;CL:0002433,9.57e-12,1;CL:0002431,9.57e-12,1;CL:0002432,9.57e-12,1;CL:0002127,1.18e-11,1;CL:0000914,1.18e-11,1;CL:0000911,1.18e-11,1;CL:0000814,1.18e-11,1;CL:0002042,1.18e-11,1;CL:0002039,1.18e-11,1;CL:0002040,1.18e-11,1;CL:0002041,1.18e-11,1;CL:0000037,4.74e-11,168;CL:0000988,2.27e-10,177;CL:0002031,3.91e-10,120;CL:0002032,5.69e-10,161;CL:0000837,5.69e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-54;18!CL:0002425;1.25e-21;2!CL:0000051;7.12e-12;53!CL:0002427;9.57e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.08e-20!15;UBERON:0000179!9.08e-20!15;UBERON:0000463!9.08e-20!15;UBERON:0002390!6.13e-07!102;UBERON:0003061!6.13e-07!102;UBERON:0002193!6.53e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.52e-11;15!UBERON:0000179;8.52e-11;15!UBERON:0000463;8.52e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.68e-11,4;UBERON:0005058,2.68e-11,4;UBERON:0009113,2.68e-11,4;UBERON:0003295,2.68e-11,4;UBERON:0005562,2.68e-11,4;UBERON:0000178,8.31e-11,15;UBERON:0000179,8.31e-11,15;UBERON:0000463,8.31e-11,15;UBERON:0003351,8.10e-08,6;UBERON:0004177,8.13e-07,7;UBERON:0005057,8.13e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.566546713487831,10.7301738208538,1.71813722741315,1.01207876807801,1.59282707162048,0.651083453856419,0.950452044448374,3.61380285786655,4.73550461271348,3.74792179657038,1.65744076430812,0,11.4915843638097,2.40696176205157,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85472637548865,9.06341496928865,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,1.66762242820452,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.566546713487831,10.7301738208538,1.71813722741315,1.01207876807801,1.59282707162048,0.651083453856419,0.950452044448374,3.61380285786655,4.73550461271348,3.74792179657038,1.65744076430812,0,11.4915843638097,2.40696176205157,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85472637548865,9.06341496928865,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,1.66762242820452,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:162757013..162757026,+ | |||
}} | }} |
Latest revision as of 01:56, 29 July 2015
Short description: | p@chr2:162757013..162757026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162757013..162757026, + |
Coexpression cluster: | C1498_CD4_CD8_Natural_NK_Eosinophils_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.68e-11 | 4 |
hemolymphoid system gland | 2.68e-11 | 4 |
thymic region | 2.68e-11 | 4 |
pharyngeal gland | 2.68e-11 | 4 |
thymus primordium | 2.68e-11 | 4 |
blood | 8.31e-11 | 15 |
haemolymphatic fluid | 8.31e-11 | 15 |
organism substance | 8.31e-11 | 15 |
pharyngeal epithelium | 8.10e-08 | 6 |
hemopoietic organ | 8.13e-07 | 7 |
immune organ | 8.13e-07 | 7 |