FFCP PHASE1:Hg19::chr2:219152622..219152637,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:219152622..219152637,-
|short_description=p@chr2:219152622..219152637,-
|description=CAGE_peak_at_chr2:219152622..219152637,-
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:219152622..219152637,- | |||
|coexpression_cluster_id=C3991 | |||
|description=CAGE_peak_at_chr2:219152622..219152637,- | |||
|id=chr2:219152622..219152637,- | |||
|ontology_enrichment_celltype=CL:0002057!1.60e-61!42;CL:0000860!6.77e-57!45;CL:0000766!3.00e-52!76;CL:0000839!4.74e-51!70;CL:0000763!1.12e-48!112;CL:0000049!1.12e-48!112;CL:0000557!6.22e-44!71;CL:0002194!1.11e-37!63;CL:0000576!1.11e-37!63;CL:0000040!1.11e-37!63;CL:0000559!1.11e-37!63;CL:0002009!2.64e-36!65;CL:0000037!7.27e-35!172;CL:0000566!7.27e-35!172;CL:0000988!2.44e-32!182;CL:0002032!1.81e-31!165;CL:0000837!1.81e-31!165;CL:0000738!2.50e-29!140;CL:0002393!3.07e-29!9;CL:0002397!3.07e-29!9;CL:0002031!7.06e-27!124;CL:0002087!4.46e-21!119;CL:0000134!1.51e-12!358;CL:0002320!4.36e-12!365;CL:0002274!8.17e-12!5;CL:0000457!8.17e-12!5;CL:0002191!8.17e-12!5;CL:0000097!8.17e-12!5;CL:0000831!8.17e-12!5;CL:0002028!8.17e-12!5;CL:0000875!3.78e-11!3;CL:0002396!3.78e-11!3;CL:0000767!1.01e-10!3;CL:0000219!1.80e-10!390;CL:0000034!1.34e-08!444;CL:0000048!1.51e-08!430;CL:0000723!2.84e-08!436;CL:0000764!3.56e-08!2;CL:0000765!3.56e-08!2;CL:0000050!3.56e-08!2;CL:0000038!3.56e-08!2;CL:0000558!3.56e-08!2;CL:0000547!3.56e-08!2;CL:0000549!3.56e-08!2;CL:0000550!3.56e-08!2;CL:0000552!3.56e-08!2;CL:0000094!5.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.03e-26;5!CL:0000766;1.24e-15;69!CL:0000163;3.77e-15;9!CL:0000860;1.06e-14;33!CL:0002057;1.06e-14;33!CL:0000473;2.44e-13;39!CL:0000234;2.44e-13;39!CL:0000576;3.49e-09;48!CL:0000763;6.61e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.89e-27,5;CL:0002028,9.89e-27,5;CL:0000766,2.23e-22,72;CL:0000839,3.47e-20,66;CL:0000557,7.11e-20,67;CL:0000763,1.46e-17,108;CL:0000049,1.46e-17,108;CL:0000860,5.90e-16,42;CL:0002057,5.90e-16,42;CL:0000163,3.69e-15,9;CL:0000473,6.63e-14,48;CL:0000234,6.63e-14,48;CL:0000738,1.14e-13,136;CL:0002032,1.58e-13,161;CL:0000837,1.58e-13,161;CL:0002031,4.77e-13,120;CL:0000037,6.53e-13,168;CL:0000988,3.44e-12,177;CL:0002194,5.01e-11,59;CL:0000576,5.01e-11,59;CL:0000040,5.01e-11,59;CL:0000559,5.01e-11,59;CL:0002009,1.18e-10,61;CL:0002087,4.73e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-40!80;UBERON:0001474!3.02e-37!86;UBERON:0002390!2.68e-34!102;UBERON:0003061!2.68e-34!102;UBERON:0004765!1.85e-30!101;UBERON:0001434!1.85e-30!101;UBERON:0002193!1.93e-30!112;UBERON:0002405!1.02e-25!115;UBERON:0002204!4.36e-15!167;UBERON:0003081!2.33e-14!216;UBERON:0002384!3.21e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-17,76;UBERON:0001474,4.16e-16,82;UBERON:0004765,1.33e-14,90;UBERON:0002405,4.19e-14,93;UBERON:0002390,2.43e-13,98;UBERON:0003061,2.43e-13,98;UBERON:0001434,4.69e-13,100;UBERON:0002193,5.09e-12,108;UBERON:0002204,2.08e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,1.54853185447552,0.863077176966451,0.768482119587302,0.236482229888585,1.03423704220986,1.29096936716765,0,0.376484679085209,0.545812300115692,0.674170453335254,1.53041946185451,0.641858054152187,0,0,0.199463657621632,0,2.03146467040009,0,0,0.251248665256743,0,1.08594422352558,0,0,0,0.422510572623884,0.637812899895131,0.209658645508376,0.336985893439485,0,0,0.570025487482497,0.39783335439818,1.0959849225878,0,1.09227722252426,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,4.35389042635621,3.89123874225796,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,4.22961015263549,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,1.54853185447552,0.863077176966451,0.768482119587302,0.236482229888585,1.03423704220986,1.29096936716765,0,0.376484679085209,0.545812300115692,0.674170453335254,1.53041946185451,0.641858054152187,0,0,0.199463657621632,0,2.03146467040009,0,0,0.251248665256743,0,1.08594422352558,0,0,0,0.422510572623884,0.637812899895131,0.209658645508376,0.336985893439485,0,0,0.570025487482497,0.39783335439818,1.0959849225878,0,1.09227722252426,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,4.35389042635621,3.89123874225796,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,4.22961015263549,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:219152622..219152637,- | |||
}} | }} |
Latest revision as of 06:36, 29 July 2015
Short description: | p@chr2:219152622..219152637, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:219152622..219152637, - |
Coexpression cluster: | C3991_acute_Mast_leukemia_chronic_Basophils_CD14_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.89e-27 | 5 |
basophil mast progenitor cell | 9.89e-27 | 5 |
myeloid leukocyte | 2.23e-22 | 72 |
myeloid lineage restricted progenitor cell | 3.47e-20 | 66 |
granulocyte monocyte progenitor cell | 7.11e-20 | 67 |
myeloid cell | 1.46e-17 | 108 |
common myeloid progenitor | 1.46e-17 | 108 |
classical monocyte | 5.90e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.90e-16 | 42 |
endocrine cell | 3.69e-15 | 9 |
defensive cell | 6.63e-14 | 48 |
phagocyte | 6.63e-14 | 48 |
leukocyte | 1.14e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.58e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 4.77e-13 | 120 |
hematopoietic stem cell | 6.53e-13 | 168 |
hematopoietic cell | 3.44e-12 | 177 |
monopoietic cell | 5.01e-11 | 59 |
monocyte | 5.01e-11 | 59 |
monoblast | 5.01e-11 | 59 |
promonocyte | 5.01e-11 | 59 |
macrophage dendritic cell progenitor | 1.18e-10 | 61 |
nongranular leukocyte | 4.73e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-17 | 76 |
bone element | 4.16e-16 | 82 |
skeletal element | 1.33e-14 | 90 |
immune system | 4.19e-14 | 93 |
hematopoietic system | 2.43e-13 | 98 |
blood island | 2.43e-13 | 98 |
skeletal system | 4.69e-13 | 100 |
hemolymphoid system | 5.09e-12 | 108 |
musculoskeletal system | 2.08e-07 | 167 |