FFCP PHASE1:Hg19::chr2:219610770..219610777,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:219610770..219610777,+
|short_description=p19@TTLL4
|description=CAGE_peak_19_at_TTLL4_5end
|association_with_transcript=-41bp_to_ENST00000480472_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9654 | |EntrezGene=9654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28976 | |HGNC=28976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000480472_5end | |||
|cluster_id=chr2:219610770..219610777,+ | |||
|coexpression_cluster_id=C753 | |||
|description=CAGE_peak_19_at_TTLL4_5end | |||
|id=chr2:219610770..219610777,+ | |||
|ontology_enrichment_celltype=CL:0002586!1.44e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.66e-23;3!CL:0000149;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.27e-23,3;CL:0000149,8.69e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;2.51e-53;5!UBERON:0005388;2.51e-53;5!UBERON:0001802;2.51e-53;5!UBERON:0001781;3.66e-23;3!UBERON:0001782;3.66e-23;3!UBERON:0000019;5.09e-15;19!UBERON:0000047;5.09e-15;19!UBERON:0004088;5.09e-15;19!UBERON:0010230;5.09e-15;19!UBERON:0002021;1.71e-14;5!UBERON:0000970;2.49e-14;20!UBERON:0002104;1.05e-13;21!UBERON:0001456;1.05e-13;21!UBERON:0000020;1.29e-12;23!UBERON:0001032;3.86e-12;24!UBERON:0004456;3.86e-12;24!UBERON:0007625;2.55e-07;11!UBERON:0000033;4.41e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.76e-45,6;UBERON:0005388,9.76e-45,6;UBERON:0001802,9.76e-45,6;UBERON:0001782,3.27e-23,3;UBERON:0005424,3.27e-23,3;UBERON:0001781,8.69e-18,4;UBERON:0002021,1.83e-14,5;UBERON:0000019,2.41e-14,20;UBERON:0000047,2.41e-14,20;UBERON:0010312,2.41e-14,20;UBERON:0004088,2.41e-14,20;UBERON:0010230,2.41e-14,20;UBERON:0003072,2.41e-14,20;UBERON:0004128,2.41e-14,20;UBERON:0003071,2.41e-14,20;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0001456,3.77e-13,22;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0003056,1.22e-10,61;UBERON:0005085,1.15e-09,31;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0007625,2.47e-07,11 | |||
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|short_description=p19@TTLL4 | |||
}} | }} |
Latest revision as of 18:26, 24 September 2015
Short description: | p19@TTLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TTLL4_5end |
Coexpression cluster: | C753_Retinal_retina_eye_kidney_caudate_corpus_putamen |
Association with transcript: | -41bp_to_ENST00000480472_5end |
EntrezGene: | TTLL4 |
HGNC: | 28976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.27e-23 | 3 |
visual pigment cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 9.76e-45 | 6 |
photoreceptor array | 9.76e-45 | 6 |
posterior segment of eyeball | 9.76e-45 | 6 |
pigmented layer of retina | 3.27e-23 | 3 |
presumptive retinal pigmented epithelium | 3.27e-23 | 3 |
layer of retina | 8.69e-18 | 4 |
occipital lobe | 1.83e-14 | 5 |
camera-type eye | 2.41e-14 | 20 |
simple eye | 2.41e-14 | 20 |
immature eye | 2.41e-14 | 20 |
ocular region | 2.41e-14 | 20 |
eyeball of camera-type eye | 2.41e-14 | 20 |
optic cup | 2.41e-14 | 20 |
optic vesicle | 2.41e-14 | 20 |
eye primordium | 2.41e-14 | 20 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
face | 3.77e-13 | 22 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
pre-chordal neural plate | 1.22e-10 | 61 |
ectodermal placode | 1.15e-09 | 31 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
pigment epithelium of eye | 2.47e-07 | 11 |