FFCP PHASE1:Mm9::chr4:129782130..129782148,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=764 | |MCL_coexpression_id=764 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:129782130..129782148,+ | |||
|description=CAGE_peak_at_chr4:129782130..129782148,+ | |description=CAGE_peak_at_chr4:129782130..129782148,+ | ||
|id=chr4:129782130..129782148,+ | |id=chr4:129782130..129782148,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9;CL:0000223!4.54e-07!20 | |ontology_enrichment_celltype=CL:0002563!1.13e-07!9;CL:0002251!1.13e-07!9;CL:0000223!4.54e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.70e-07,9;CL:0002251,6.70e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.22e-15!43;UBERON:0000344!1.25e-12!15;UBERON:0005409!2.61e-12!59;UBERON:0002107!4.64e-12!22;UBERON:0007499!4.64e-12!22;UBERON:0006925!4.64e-12!22;UBERON:0009497!4.64e-12!22;UBERON:0000015!4.64e-12!22;UBERON:0002423!4.64e-12!22;UBERON:0006235!4.64e-12!22;UBERON:0008835!4.64e-12!22;UBERON:0003894!4.64e-12!22;UBERON:0004161!4.64e-12!22;UBERON:0008836!4.64e-12!22;UBERON:0004119!1.95e-11!130;UBERON:0000925!1.95e-11!130;UBERON:0006595!1.95e-11!130;UBERON:0001242!2.31e-11!13;UBERON:0000060!2.31e-11!13;UBERON:0001262!2.31e-11!13;UBERON:0004786!2.31e-11!13;UBERON:0009854!2.72e-11!23;UBERON:0009856!2.72e-11!23;UBERON:0001007!3.47e-11!128;UBERON:0001555!3.47e-11!128;UBERON:0007026!3.47e-11!128;UBERON:0005172!2.27e-10!49;UBERON:0005173!2.27e-10!49;UBERON:0002417!2.27e-10!49;UBERON:0000916!2.27e-10!49;UBERON:0004921!2.91e-10!126;UBERON:0004185!2.91e-10!126;UBERON:0002365!5.98e-10!25;UBERON:0002330!5.98e-10!25;UBERON:0004923!1.40e-08!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0003929!6.63e-07!55 | |ontology_enrichment_uberon=UBERON:0000160!9.22e-15!43;UBERON:0000344!1.25e-12!15;UBERON:0005409!2.61e-12!59;UBERON:0002107!4.64e-12!22;UBERON:0007499!4.64e-12!22;UBERON:0006925!4.64e-12!22;UBERON:0009497!4.64e-12!22;UBERON:0000015!4.64e-12!22;UBERON:0002423!4.64e-12!22;UBERON:0006235!4.64e-12!22;UBERON:0008835!4.64e-12!22;UBERON:0003894!4.64e-12!22;UBERON:0004161!4.64e-12!22;UBERON:0008836!4.64e-12!22;UBERON:0004119!1.95e-11!130;UBERON:0000925!1.95e-11!130;UBERON:0006595!1.95e-11!130;UBERON:0001242!2.31e-11!13;UBERON:0000060!2.31e-11!13;UBERON:0001262!2.31e-11!13;UBERON:0004786!2.31e-11!13;UBERON:0009854!2.72e-11!23;UBERON:0009856!2.72e-11!23;UBERON:0001007!3.47e-11!128;UBERON:0001555!3.47e-11!128;UBERON:0007026!3.47e-11!128;UBERON:0005172!2.27e-10!49;UBERON:0005173!2.27e-10!49;UBERON:0002417!2.27e-10!49;UBERON:0000916!2.27e-10!49;UBERON:0004921!2.91e-10!126;UBERON:0004185!2.91e-10!126;UBERON:0002365!5.98e-10!25;UBERON:0002330!5.98e-10!25;UBERON:0004923!1.40e-08!24;UBERON:0003350!1.13e-07!9;UBERON:0004808!1.13e-07!9;UBERON:0001277!1.13e-07!9;UBERON:0003929!6.63e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.83e-20,31;UBERON:0005409,1.79e-12,47;UBERON:0001242,8.08e-10,13;UBERON:0001262,8.08e-10,13;UBERON:0004786,8.08e-10,13;UBERON:0000344,1.97e-08,15;UBERON:0004921,8.05e-08,114;UBERON:0001007,1.27e-07,116;UBERON:0001555,1.27e-07,116;UBERON:0007026,1.27e-07,116;UBERON:0004119,1.96e-07,118;UBERON:0000925,1.96e-07,118;UBERON:0006595,1.96e-07,118;UBERON:0003350,6.70e-07,9;UBERON:0004808,6.70e-07,9;UBERON:0001277,6.70e-07,9 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,2.41971369045464,4.00716583957078,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0.988779870937496,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0.128867461322093,0.80673409849337,0.667134131534611,1.14135375667535,0.949058123089023,1.4822905925161,2.26201687920243,2.38747766449381,1.55971269695296,0.898819408654221,0.864552199498777,1.1948476395262,0,0,0,0,0.387904974335251,1.54298803758701,2.21327879934901,1.47610147979602,2.04098346193787,2.09775178667061,0.296452627087149,0,0,0,0.202860121388503,0.72353147925725,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,1.48856379067401,1.5601883655728,1.26289438973556,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,1.68342681497322,0,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,2.41971369045464,4.00716583957078,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0.988779870937496,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.05780226665418,0,0,0.128867461322093,0.80673409849337,0.667134131534611,1.14135375667535,0.949058123089023,1.4822905925161,2.26201687920243,2.38747766449381,1.55971269695296,0.898819408654221,0.864552199498777,1.1948476395262,0,0,0,0,0.387904974335251,1.54298803758701,2.21327879934901,1.47610147979602,2.04098346193787,2.09775178667061,0.296452627087149,0,0,0,0.202860121388503,0.72353147925725,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,1.48856379067401,1.5601883655728,1.26289438973556,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,1.68342681497322,0,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr4:129782130..129782148,+ | |short_description=p@chr4:129782130..129782148,+ | ||
}} | }} |
Latest revision as of 20:03, 4 August 2015
Short description: | p@chr4:129782130..129782148, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129782130..129782148, + |
Coexpression cluster: | MCL_coexpression_mm9:764 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.70e-07 | 9 |
epithelial cell of alimentary canal | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.83e-20 | 31 |
gastrointestinal system | 1.79e-12 | 47 |
intestinal mucosa | 8.08e-10 | 13 |
wall of intestine | 8.08e-10 | 13 |
gastrointestinal system mucosa | 8.08e-10 | 13 |
mucosa | 1.97e-08 | 15 |
subdivision of digestive tract | 8.05e-08 | 114 |
digestive system | 1.27e-07 | 116 |
digestive tract | 1.27e-07 | 116 |
primitive gut | 1.27e-07 | 116 |
endoderm-derived structure | 1.96e-07 | 118 |
endoderm | 1.96e-07 | 118 |
presumptive endoderm | 1.96e-07 | 118 |
epithelium of mucosa | 6.70e-07 | 9 |
gastrointestinal system epithelium | 6.70e-07 | 9 |
intestinal epithelium | 6.70e-07 | 9 |