FFCP PHASE1:Mm9::chr7:29160541..29160603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=118 | |MCL_coexpression_id=118 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29160541..29160603,- | |||
|description=CAGE_peak_at_chr7:29160541..29160603,- | |description=CAGE_peak_at_chr7:29160541..29160603,- | ||
|id=chr7:29160541..29160603,- | |id=chr7:29160541..29160603,- | ||
|ontology_enrichment_celltype=CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000542!1.90e-09!13;CL:0000051!1.90e-09!13;CL:0000838!3.79e-09!12;CL:0000084!1.65e-08!11;CL:0000827!1.65e-08!11;CL:0000738!6.80e-08!17;CL:0002087!6.80e-08!17;CL:0000791!2.17e-07!9;CL:0000789!2.17e-07!9;CL:0002420!2.17e-07!9;CL:0002419!2.17e-07!9;CL:0000790!2.17e-07!9;CL:0002031!2.81e-07!25;CL:0002320!4.86e-07!46;CL:0000134!4.86e-07!46;CL:0000624!7.02e-07!8 | |ontology_enrichment_celltype=CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000542!1.90e-09!13;CL:0000051!1.90e-09!13;CL:0000838!3.79e-09!12;CL:0000084!1.65e-08!11;CL:0000827!1.65e-08!11;CL:0000738!6.80e-08!17;CL:0002087!6.80e-08!17;CL:0000791!2.17e-07!9;CL:0000789!2.17e-07!9;CL:0002420!2.17e-07!9;CL:0002419!2.17e-07!9;CL:0000790!2.17e-07!9;CL:0002031!2.81e-07!25;CL:0002320!4.86e-07!46;CL:0000134!4.86e-07!46;CL:0000624!7.02e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.58e-17,13;CL:0000051,6.58e-17,13;CL:0000838,2.51e-16,12;CL:0000988,3.05e-15,32;CL:0002032,3.05e-15,32;CL:0000037,3.05e-15,32;CL:0000837,3.05e-15,32;CL:0000084,4.40e-15,11;CL:0000827,4.40e-15,11;CL:0000738,7.28e-14,17;CL:0002087,7.28e-14,17;CL:0000791,6.48e-13,9;CL:0000789,6.48e-13,9;CL:0002420,6.48e-13,9;CL:0002419,6.48e-13,9;CL:0000790,6.48e-13,9;CL:0002320,7.86e-13,46;CL:0000134,7.86e-13,46;CL:0002031,1.35e-12,25;CL:0000624,6.31e-12,8;CL:0000219,1.45e-10,54;CL:0000893,2.66e-09,6;CL:0002489,2.66e-09,6;CL:0000898,2.66e-09,6;CL:0000809,2.66e-09,6;CL:0000810,2.66e-09,6;CL:0000895,2.66e-09,6;CL:0000808,2.66e-09,6;CL:0000894,2.66e-09,6;CL:0000806,2.66e-09,6;CL:0000807,2.66e-09,6;CL:0000805,2.66e-09,6;CL:0002425,2.66e-09,6;CL:0002436,2.66e-09,6;CL:0002427,2.66e-09,6;CL:0002428,2.66e-09,6;CL:0002429,2.66e-09,6;CL:0002433,2.66e-09,6;CL:0002431,2.66e-09,6;CL:0002432,2.66e-09,6;CL:0000034,6.09e-09,97;CL:0000723,9.13e-08,91;CL:0000048,9.13e-08,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.13e-09!41;UBERON:0002193!4.92e-09!48;UBERON:0001004!1.07e-08!42;UBERON:0002390!1.34e-08!45;UBERON:0003061!1.34e-08!45;UBERON:0002370!3.75e-08!23;UBERON:0000974!3.75e-08!23;UBERON:0004807!3.75e-08!23;UBERON:0005058!3.75e-08!23;UBERON:0003351!3.75e-08!23;UBERON:0009113!3.75e-08!23;UBERON:0003295!3.75e-08!23;UBERON:0009722!3.75e-08!23;UBERON:0005562!3.75e-08!23;UBERON:0007690!3.75e-08!23;UBERON:0004177!4.90e-08!29;UBERON:0003081!1.94e-07!88;UBERON:0006562!2.87e-07!24;UBERON:0003408!2.87e-07!24;UBERON:0001557!2.87e-07!24;UBERON:0001042!2.87e-07!24;UBERON:0008814!2.87e-07!24;UBERON:0009145!2.87e-07!24;UBERON:0002384!4.86e-07!46 | |ontology_enrichment_uberon=UBERON:0000065!2.13e-09!41;UBERON:0002193!4.92e-09!48;UBERON:0001004!1.07e-08!42;UBERON:0002390!1.34e-08!45;UBERON:0003061!1.34e-08!45;UBERON:0002370!3.75e-08!23;UBERON:0000974!3.75e-08!23;UBERON:0004807!3.75e-08!23;UBERON:0005058!3.75e-08!23;UBERON:0003351!3.75e-08!23;UBERON:0009113!3.75e-08!23;UBERON:0003295!3.75e-08!23;UBERON:0009722!3.75e-08!23;UBERON:0005562!3.75e-08!23;UBERON:0007690!3.75e-08!23;UBERON:0004177!4.90e-08!29;UBERON:0003081!1.94e-07!88;UBERON:0006562!2.87e-07!24;UBERON:0003408!2.87e-07!24;UBERON:0001557!2.87e-07!24;UBERON:0001042!2.87e-07!24;UBERON:0008814!2.87e-07!24;UBERON:0009145!2.87e-07!24;UBERON:0002384!4.86e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.59e-16,23;UBERON:0000974,8.59e-16,23;UBERON:0004807,8.59e-16,23;UBERON:0005058,8.59e-16,23;UBERON:0003351,8.59e-16,23;UBERON:0009113,8.59e-16,23;UBERON:0003295,8.59e-16,23;UBERON:0009722,8.59e-16,23;UBERON:0005562,8.59e-16,23;UBERON:0007690,8.59e-16,23;UBERON:0006562,6.96e-15,24;UBERON:0003408,6.96e-15,24;UBERON:0001557,6.96e-15,24;UBERON:0001042,6.96e-15,24;UBERON:0008814,6.96e-15,24;UBERON:0009145,6.96e-15,24;UBERON:0004177,8.91e-14,29;UBERON:0005057,8.91e-14,29;UBERON:0002193,3.79e-13,48;UBERON:0002405,3.79e-13,48;UBERON:0002390,3.93e-13,45;UBERON:0003061,3.93e-13,45;UBERON:0002384,7.86e-13,46;UBERON:0000072,1.42e-12,27;UBERON:0000065,2.05e-12,41;UBERON:0001004,6.09e-12,42;UBERON:0000077,8.43e-12,35;UBERON:0007811,3.83e-09,36;UBERON:0005911,6.85e-08,69;UBERON:0000153,1.79e-07,43;UBERON:0003081,6.81e-07,87;UBERON:0001041,9.51e-07,80;UBERON:0003929,9.59e-07,55 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,1.50268718983904,0.33575854382378,0.934450562382103,11.879345756625,12.9525624379533,11.2350972634557,6.8487187290202,3.19088635981346,6.67682846731702,8.65461983948074,0,0.404950534779652,0.699561878128147,2.83915948822414,1.64537320326887,3.39511721438424,0.935476191661768,2.58156473122302,3.91799683708403,0.639969691173627,0.45881856213434,0,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0,2.54012269383853,0.61506478758457,0,1.1554064790051,0.664938581433969,0.408338712524738,0.837063261473815,3.1253413780952,0,4.1176204162171,2.04913645487534,0.485510353031154,0.755380907853464,1.92616169317078,0.734187008646726,0.782391344348039,1.09012578190223,0,0,0.979904951377538,0,5.03347818173209,5.80289713609076,2.68875039313971,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,2.96659908770092,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.210324961351382,0,0,0.367472397644862,0.287536413054709,0.919218786610021,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.372798891650601,0,0.226714680320357,6.37701875143691,0,0,1.61910957491345,0.649776417447669,0,0.140444420131752,1.02258193546835,0.519572009205738,0.35333957451034,2.39433813620357,0,2.54805239706646,0,0.865964164044856,0.253359865475099,0,0.5709193985953,5.17875767294343,0.593768556259299,0.173485326766136,0.608930956624282,0,0.452167921657868,0.117588707135705,0.125666591329675,0.494389935468748,0.722996784599558,0.884610551949874,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,0.510914110417183,1.91704199209472,2.99951365496704,2.1601938602421,0,0,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0.509196819251581,1.11966273549084,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.360124259610698,0.753524089178575,0.272145996605311,0.768682321709099,0.374806898238915,0,0.646703978798527,0.378212160335639,1.05570674498369,0.219195732427575,0.556094498451196,0,0.823128545631774,0.59710280045548,0.702213187313235,1.54408744268829,0.852490498186778,0.828503090142008,1.40715635988658,1.2604344302271,0.23674473558521,0.983821158737019,0.462801338662135,0.232533944750408,0.268273401399619,0.817357396570186,0,0.164167464079095,0.0810688095458557,1.02339991197733,0,0.134206418760372,0,0.720332286654991,1.32167513193519,0,1.2797295032114,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.760902504450237,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.228497025219458,0,0.407302655690628,0.581857461502877,0.210407459670956,0.69560190836683,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.50925170356284,1.43848068725405,0,0,0,0,0,0.252578877947112,0,0.482443521363367,3.14080423283228,0.947457058852424,0.651859905768103,0.848725428875941,0.704070744865506,1.50755631697634,0.714130922658041,1.56106918286239,0.945810864637146,0.44292937929755,0.637819074629948,2.29408640602033,1.20879487306127,1.15719246865209,0,2.17562273527484,0.491764273019036,0,0,0.234423373184406,0.983609672260053,0,1.89304931649754,0.390438744296638,2.15423397732799,1.67278158566786,1.33679204449436,2.26461224631066,1.21443210502468,0.584511715822624,0.790575555893047,0,0.99358059645788,1.42452482933804,0.81443479676788,1.48473110675282,0,1.21390318077491,0.302323556964751,0,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.643011105094777,0,0.535106452806212,0.658196082408484,0.304464949114599,0.469343416127421,0.42366414172764,0.441056796109924,1.48397627647332,0.161464426695906,0.120625849856312,0.477489376012546,0,0.582961673259701,0,1.19609616558497,0.412773735926445,1.11116716421827,0.565105371014073,0.136694227721025,0.915112692826091,3.22959016988325,4.89830083132803,2.76399947608848,0.954670618015114,1.10717597753397,0.813277868507395,0.540026704109006,0.627264888043406,1.09181281873089,0.809186078308924,0.41326727862668,0.26175594198403,0.648074866458964,0,0,0.747582730219894,1.48912641411388,0.194451188344048,0.645799117388655,1.01373675294467,0.469428954583016,0.13020438484395,0.419437377702843,0,0,3.47612232690996,0.202725215290164,0.513554785824136,0.389762468933385,2.14832034800978,3.57626438606277,1.32214994471966,3.10148007066612,3.73575864808146,2.057583779685,3.93222122033678,1.94915761479505,5.19543944857779,8.06450625052826,0,0.221985953374065,0.358855426437903,0.335769232728157,0.579568782096571,0.750729901804728,0.915758121336325,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,1.11123363900808,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.640251524048693,0.402048282689293,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.29439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| ||
|short_description=p@chr7:29160541..29160603,- | |short_description=p@chr7:29160541..29160603,- | ||
}} | }} |
Latest revision as of 22:54, 4 August 2015
Short description: | p@chr7:29160541..29160603, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29160541..29160603, - |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.59e-16 | 23 |
neck | 8.59e-16 | 23 |
respiratory system epithelium | 8.59e-16 | 23 |
hemolymphoid system gland | 8.59e-16 | 23 |
pharyngeal epithelium | 8.59e-16 | 23 |
thymic region | 8.59e-16 | 23 |
pharyngeal gland | 8.59e-16 | 23 |
entire pharyngeal arch endoderm | 8.59e-16 | 23 |
thymus primordium | 8.59e-16 | 23 |
early pharyngeal endoderm | 8.59e-16 | 23 |
pharynx | 6.96e-15 | 24 |
gland of gut | 6.96e-15 | 24 |
upper respiratory tract | 6.96e-15 | 24 |
chordate pharynx | 6.96e-15 | 24 |
pharyngeal arch system | 6.96e-15 | 24 |
pharyngeal region of foregut | 6.96e-15 | 24 |
hemopoietic organ | 8.91e-14 | 29 |
immune organ | 8.91e-14 | 29 |
hemolymphoid system | 3.79e-13 | 48 |
immune system | 3.79e-13 | 48 |
hematopoietic system | 3.93e-13 | 45 |
blood island | 3.93e-13 | 45 |
connective tissue | 7.86e-13 | 46 |
segment of respiratory tract | 1.42e-12 | 27 |
respiratory tract | 2.05e-12 | 41 |
respiratory system | 6.09e-12 | 42 |
mixed endoderm/mesoderm-derived structure | 8.43e-12 | 35 |
craniocervical region | 3.83e-09 | 36 |
endo-epithelium | 6.85e-08 | 69 |
anterior region of body | 1.79e-07 | 43 |
lateral plate mesoderm | 6.81e-07 | 87 |
foregut | 9.51e-07 | 80 |
gut epithelium | 9.59e-07 | 55 |