FFCP PHASE1:Hg19::chr2:62104524..62104528,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:62104524..62104528,-
|short_description=p12@CCT4
|description=CAGE_peak_12_at_CCT4_5end
|association_with_transcript=-363bp_to_ENST00000461540_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10575 | |EntrezGene=10575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1617 | |HGNC=1617 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-363bp_to_ENST00000461540_5end | |||
|cluster_id=chr2:62104524..62104528,- | |||
|coexpression_cluster_id=C1335 | |||
|description=CAGE_peak_12_at_CCT4_5end | |||
|id=chr2:62104524..62104528,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.59e-23;1!CL:0000346;1.35e-08;3!CL:1000428;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.13e-23,1;CL:0000346,1.30e-08,3;CL:1000428,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.32e-07!15;UBERON:0000179!7.32e-07!15;UBERON:0000463!7.32e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.44e-37;15!UBERON:0000179;7.44e-37;15!UBERON:0000463;7.44e-37;15!UBERON:0002390;4.75e-16;32!UBERON:0000078;3.06e-12;2!UBERON:0002012;3.06e-12;2!UBERON:0008886;3.06e-12;2!UBERON:0002193;2.13e-09;42!UBERON:0000412;1.35e-08;3!UBERON:0001992;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.66e-37,15;UBERON:0000179,6.66e-37,15;UBERON:0000463,6.66e-37,15;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0000412,1.30e-08,3;UBERON:0001992,1.30e-08,3;UBERON:0004145,1.40e-08,3;UBERON:0004535,2.80e-07,109;UBERON:0001009,4.42e-07,112;UBERON:0007023,5.52e-07,114 | |||
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| ||
|short_description=p12@CCT4 | |||
}} | }} |
Latest revision as of 21:42, 17 September 2015
Short description: | p12@CCT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CCT4_5end |
Coexpression cluster: | C1335_Whole_testis_Burkitt_Neutrophils_Eosinophils_Mesenchymal_CD19 |
Association with transcript: | -363bp_to_ENST00000461540_5end |
EntrezGene: | CCT4 |
HGNC: | 1617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
hair follicle dermal papilla cell | 1.30e-08 | 3 |
stem cell of epidermis | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.66e-37 | 15 |
haemolymphatic fluid | 6.66e-37 | 15 |
organism substance | 6.66e-37 | 15 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
aortic sac | 3.24e-12 | 2 |
pharyngeal arch artery | 3.24e-12 | 2 |
dermal papilla | 1.30e-08 | 3 |
papillary layer of dermis | 1.30e-08 | 3 |
outflow tract | 1.40e-08 | 3 |
cardiovascular system | 2.80e-07 | 109 |
circulatory system | 4.42e-07 | 112 |
adult organism | 5.52e-07 | 114 |