FFCP PHASE1:Hg19::chr2:97527791..97527826,-: Difference between revisions
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|id=chr2:97527791..97527826,-
|short_description=p15@SEMA4C
|description=CAGE_peak_15_at_SEMA4C_5end
|association_with_transcript=357bp_to_ENST00000474420_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54910 | |EntrezGene=54910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |HGNC=10731 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=357bp_to_ENST00000474420_5end | |||
|cluster_id=chr2:97527791..97527826,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_15_at_SEMA4C_5end | |||
|id=chr2:97527791..97527826,- | |||
|ontology_enrichment_celltype=CL:0000313!1.77e-10!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.35e-18;3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.03e-20!2;UBERON:0002757!1.03e-20!2;UBERON:0010134!1.03e-20!2;UBERON:0002784!1.03e-20!2;UBERON:0005408!1.03e-20!2;UBERON:0001899!1.03e-20!2;UBERON:0000998!5.05e-11!1;UBERON:0006868!5.05e-11!1;UBERON:0003296!7.84e-11!4;UBERON:0010133!7.84e-11!4;UBERON:0004911!1.77e-10!1;UBERON:0005743!2.37e-09!86;UBERON:0000073!2.39e-08!94;UBERON:0001016!2.39e-08!94;UBERON:0001017!6.50e-08!82;UBERON:0003075!1.21e-07!86;UBERON:0007284!1.21e-07!86;UBERON:0001049!2.72e-07!57;UBERON:0005068!2.72e-07!57;UBERON:0006241!2.72e-07!57;UBERON:0007135!2.72e-07!57;UBERON:0002346!2.97e-07!90;UBERON:0002616!5.03e-07!59;UBERON:0007023!7.96e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0002784;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0000966;2.80e-11;5!UBERON:0005388;2.80e-11;5!UBERON:0001802;2.80e-11;5!UBERON:0000970;5.70e-11;20!UBERON:0002104;1.69e-10;21!UBERON:0000020;1.12e-09;23!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.56e-98,2;UBERON:0002757,2.56e-98,2;UBERON:0010134,2.56e-98,2;UBERON:0005408,2.56e-98,2;UBERON:0001899,2.56e-98,2;UBERON:0003296,6.60e-50,4;UBERON:0010133,6.60e-50,4;UBERON:0002784,6.60e-50,4;UBERON:0001894,4.21e-29,7;UBERON:0006222,4.21e-29,7;UBERON:0000970,1.61e-10,21;UBERON:0002104,1.61e-10,21;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0000020,2.45e-09,24;UBERON:0001032,2.45e-09,24;UBERON:0004456,2.45e-09,24;UBERON:0003056,4.39e-08,61 | |||
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|short_description=p15@SEMA4C | |||
}} | }} |
Latest revision as of 01:58, 19 September 2015
Short description: | p15@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SEMA4C_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 357bp_to_ENST00000474420_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.56e-98 | 2 |
regional part of epithalamus | 2.56e-98 | 2 |
secretory circumventricular organ | 2.56e-98 | 2 |
circumventricular organ | 2.56e-98 | 2 |
epithalamus | 2.56e-98 | 2 |
gland of diencephalon | 6.60e-50 | 4 |
neuroendocrine gland | 6.60e-50 | 4 |
regional part of diencephalon | 6.60e-50 | 4 |
diencephalon | 4.21e-29 | 7 |
future diencephalon | 4.21e-29 | 7 |
eye | 1.61e-10 | 21 |
visual system | 1.61e-10 | 21 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
sense organ | 2.45e-09 | 24 |
sensory system | 2.45e-09 | 24 |
entire sense organ system | 2.45e-09 | 24 |
pre-chordal neural plate | 4.39e-08 | 61 |