FFCP PHASE1:Hg19::chr3:119188119..119188129,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:119188119..119188129,-
|short_description=p18@TMEM39A
|description=CAGE_peak_18_at_TMEM39A_5end
|association_with_transcript=-442bp_to_ENST00000497993_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55254 | |EntrezGene=55254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25600 | |HGNC=25600 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUZ6 | |UniProt=C9JUZ6 | ||
|association_with_transcript=-442bp_to_ENST00000497993_5end | |||
|cluster_id=chr3:119188119..119188129,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_18_at_TMEM39A_5end | |||
|id=chr3:119188119..119188129,- | |||
|ontology_enrichment_celltype=CL:0002057!2.46e-29!42;CL:0000860!4.38e-27!45;CL:0002009!3.77e-24!65;CL:0000557!5.60e-24!71;CL:0000738!7.37e-24!140;CL:0002031!3.28e-22!124;CL:0000453!1.13e-21!5;CL:0000037!5.30e-21!172;CL:0000566!5.30e-21!172;CL:0000988!6.68e-21!182;CL:0002032!1.34e-20!165;CL:0000837!1.34e-20!165;CL:0002194!6.03e-20!63;CL:0000576!6.03e-20!63;CL:0000040!6.03e-20!63;CL:0000559!6.03e-20!63;CL:0000763!1.41e-19!112;CL:0000049!1.41e-19!112;CL:0000839!1.43e-19!70;CL:0002087!5.28e-18!119;CL:0000766!1.14e-17!76;CL:0000990!8.35e-17!8;CL:0000451!1.24e-13!10;CL:0001014!2.19e-10!2;CL:0001016!2.19e-10!2;CL:0000134!6.93e-09!358;CL:0002320!1.48e-08!365;CL:0002393!6.87e-08!9;CL:0002397!6.87e-08!9;CL:0000034!1.83e-07!444;CL:0000219!2.11e-07!390;CL:0000840!2.58e-07!5;CL:0001029!2.58e-07!5;CL:0000048!2.79e-07!430;CL:0000723!4.61e-07!436;CL:0000623!8.21e-07!3;CL:0000825!8.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0001014;8.81e-51;2!CL:0001016;8.81e-51;2!CL:0000453;4.91e-21;5!CL:0000840;1.03e-17;5!CL:0000860;4.38e-16;33!CL:0002057;4.38e-16;33!CL:0000990;3.74e-12;8!CL:0000473;3.60e-11;39!CL:0000234;3.60e-11;39!CL:0000451;4.03e-10;10!CL:0000576;3.12e-07;48!CL:0000766;9.29e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.82e-51,2;CL:0001016,8.82e-51,2;CL:0000453,4.92e-21,5;CL:0002009,1.27e-19,61;CL:0000557,6.69e-18,67;CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0000860,5.75e-15,42;CL:0002057,5.75e-15,42;CL:0000473,3.93e-13,48;CL:0000234,3.93e-13,48;CL:0000990,3.74e-12,8;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002194,1.48e-10,59;CL:0000576,1.48e-10,59;CL:0000040,1.48e-10,59;CL:0000559,1.48e-10,59;CL:0000451,4.03e-10,10;CL:0002031,4.51e-10,120;CL:0000839,1.78e-09,66;CL:0000738,6.88e-09,136;CL:0000766,1.03e-08,72;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.30e-23!80;UBERON:0001474!5.89e-21!86;UBERON:0002390!2.73e-20!102;UBERON:0003061!2.73e-20!102;UBERON:0002193!5.85e-18!112;UBERON:0002405!2.99e-17!115;UBERON:0004765!4.74e-17!101;UBERON:0001434!4.74e-17!101;UBERON:0002204!3.33e-09!167;UBERON:0002384!4.14e-08!375;UBERON:0003081!2.26e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.08e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0004765,2.15e-13,90;UBERON:0002405,5.74e-13,93;UBERON:0002390,2.59e-12,98;UBERON:0003061,2.59e-12,98;UBERON:0001434,4.53e-12,100;UBERON:0002193,3.49e-11,108;UBERON:0002204,3.15e-07,167 | |||
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| ||
|short_description=p18@TMEM39A | |||
}} | }} |
Latest revision as of 20:02, 19 September 2015
Short description: | p18@TMEM39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TMEM39A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -442bp_to_ENST00000497993_5end |
EntrezGene: | TMEM39A |
HGNC: | 25600 |
UniProt: | C9JUZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature CD1a-positive Langerhans cell | 8.82e-51 | 2 |
Langerhans cell | 4.92e-21 | 5 |
macrophage dendritic cell progenitor | 1.27e-19 | 61 |
granulocyte monocyte progenitor cell | 6.69e-18 | 67 |
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
classical monocyte | 5.75e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.75e-15 | 42 |
defensive cell | 3.93e-13 | 48 |
phagocyte | 3.93e-13 | 48 |
conventional dendritic cell | 3.74e-12 | 8 |
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
monopoietic cell | 1.48e-10 | 59 |
monocyte | 1.48e-10 | 59 |
monoblast | 1.48e-10 | 59 |
promonocyte | 1.48e-10 | 59 |
dendritic cell | 4.03e-10 | 10 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
myeloid lineage restricted progenitor cell | 1.78e-09 | 66 |
leukocyte | 6.88e-09 | 136 |
myeloid leukocyte | 1.03e-08 | 72 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.08e-16 | 76 |
bone element | 1.11e-14 | 82 |
skeletal element | 2.15e-13 | 90 |
immune system | 5.74e-13 | 93 |
hematopoietic system | 2.59e-12 | 98 |
blood island | 2.59e-12 | 98 |
skeletal system | 4.53e-12 | 100 |
hemolymphoid system | 3.49e-11 | 108 |
musculoskeletal system | 3.15e-07 | 167 |