FFCP PHASE1:Hg19::chr3:12189970..12189984,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:12189970..12189984,+
|short_description=p4@SYN2
|description=CAGE_peak_4_at_SYN2_5end
|association_with_transcript=-72bp_to_ENST00000439861,uc003bwn.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6854 | |EntrezGene=6854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |HGNC=11495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000439861,uc003bwn.2_5end | |||
|cluster_id=chr3:12189970..12189984,+ | |||
|coexpression_cluster_id=C409 | |||
|description=CAGE_peak_4_at_SYN2_5end | |||
|id=chr3:12189970..12189984,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.97e-13!15;CL:0002521!2.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.74e-38;13!CL:0002521;4.08e-16;3!CL:0002615;1.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.92e-33,15;CL:0002521,4.19e-16,3;CL:0002615,1.34e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.82e-12;4!UBERON:0007284;8.82e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.45e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.31e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.86e-41!115;UBERON:0003075!2.88e-09!86;UBERON:0007284!2.88e-09!86;UBERON:0002346!1.49e-08!90;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0004151!1.99e-07!3;UBERON:0002190!2.16e-07!3;UBERON:0002616!2.93e-07!59;UBERON:0003978!3.33e-07!3;UBERON:0009751!3.33e-07!3;UBERON:0000946!3.33e-07!3;UBERON:0002523!3.33e-07!3;UBERON:0005983!3.33e-07!3;UBERON:0002165!3.33e-07!3;UBERON:0002062!3.33e-07!3;UBERON:0007280!3.33e-07!3;UBERON:0005743!3.46e-07!86;UBERON:0001017!4.68e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.97e-16;3!UBERON:0002190;4.08e-16;3!UBERON:0003978;1.56e-15;3!UBERON:0000946;1.56e-15;3!UBERON:0007100;4.93e-15;25!UBERON:0005090;2.71e-11;2!UBERON:0001630;2.71e-11;2!UBERON:0002081;3.08e-11;2!UBERON:0002133;4.29e-11;2!UBERON:0002072;7.27e-10;5!UBERON:0000948;9.82e-08;22!UBERON:0001389;7.90e-07;1!UBERON:0000026;7.90e-07;1!UBERON:0008784;7.90e-07;1!UBERON:0006058;7.90e-07;1!UBERON:0003663;7.90e-07;1!UBERON:0004256;7.90e-07;1!UBERON:0004708;7.90e-07;1!UBERON:0002101;7.90e-07;1!UBERON:0004709;7.90e-07;1!UBERON:0002529;7.90e-07;1!UBERON:0010538;7.90e-07;1!UBERON:0003661;7.90e-07;1!UBERON:0010890;7.90e-07;1!UBERON:0002471;7.90e-07;1!UBERON:0001383;7.90e-07;1!UBERON:0010758;7.90e-07;1!UBERON:0010707;7.90e-07;1!UBERON:0000978;7.90e-07;1!UBERON:0002103;7.90e-07;1!UBERON:0001665;7.90e-07;1!UBERON:0003823;7.90e-07;1!UBERON:0000154;7.90e-07;1!UBERON:0010709;7.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.41e-16,3;UBERON:0002190,4.19e-16,3;UBERON:0003978,1.22e-15,3;UBERON:0009751,1.22e-15,3;UBERON:0000946,1.22e-15,3;UBERON:0002523,1.22e-15,3;UBERON:0005983,1.22e-15,3;UBERON:0002165,1.22e-15,3;UBERON:0002062,1.22e-15,3;UBERON:0007280,1.22e-15,3;UBERON:0007100,7.43e-14,27;UBERON:0007023,3.16e-13,114;UBERON:0005090,1.99e-11,2;UBERON:0001630,1.99e-11,2;UBERON:0002081,2.71e-11,2;UBERON:0010227,2.71e-11,2;UBERON:0002133,3.88e-11,2;UBERON:0002072,7.38e-10,5;UBERON:0000948,4.49e-07,24;UBERON:0005498,4.49e-07,24;UBERON:0004140,4.49e-07,24;UBERON:0009881,4.49e-07,24;UBERON:0004141,4.49e-07,24;UBERON:0003084,4.49e-07,24;UBERON:0007005,4.49e-07,24;UBERON:0004139,4.49e-07,24;UBERON:0004291,4.49e-07,24;UBERON:0004797,5.71e-07,7;UBERON:0003103,6.94e-07,68;UBERON:0005418,7.90e-07,1;UBERON:0001389,7.90e-07,1;UBERON:0000026,7.90e-07,1;UBERON:0008784,7.90e-07,1;UBERON:0006058,7.90e-07,1;UBERON:0003663,7.90e-07,1;UBERON:0004256,7.90e-07,1;UBERON:0004708,7.90e-07,1;UBERON:0002101,7.90e-07,1;UBERON:0004709,7.90e-07,1;UBERON:0002529,7.90e-07,1;UBERON:0010538,7.90e-07,1;UBERON:0003661,7.90e-07,1;UBERON:0010890,7.90e-07,1;UBERON:0002471,7.90e-07,1;UBERON:0001383,7.90e-07,1;UBERON:0004357,7.90e-07,1;UBERON:0004347,7.90e-07,1;UBERON:0005420,7.90e-07,1;UBERON:0005732,7.90e-07,1;UBERON:0010758,7.90e-07,1;UBERON:0010707,7.90e-07,1;UBERON:0000978,7.90e-07,1;UBERON:0002103,7.90e-07,1;UBERON:0001665,7.90e-07,1;UBERON:0003823,7.90e-07,1;UBERON:0000154,7.90e-07,1;UBERON:0010709,7.90e-07,1;UBERON:0005733,7.90e-07,1;UBERON:0005730,7.90e-07,1 | |||
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| ||
|short_description=p4@SYN2 | |||
}} | }} |
Latest revision as of 23:22, 19 September 2015
Short description: | p4@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYN2_5end |
Coexpression cluster: | C409_adipose_mature_breast_lung_skeletal_Melanocyte_left |
Association with transcript: | -72bp_to_ENST00000439861, uc003bwn.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.92e-33 | 15 |
subcutaneous fat cell | 4.19e-16 | 3 |
adipocyte of omentum tissue | 1.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.31e-11 | 2 |