FFCP PHASE1:Hg19::chr3:159570936..159570956,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:159570936..159570956,+
|short_description=p16@SCHIP1
|description=CAGE_peak_16_at_SCHIP1_5end
|association_with_transcript=155bp_to_ENST00000482885_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=155bp_to_ENST00000482885_5end | |||
|cluster_id=chr3:159570936..159570956,+ | |||
|coexpression_cluster_id=C4298 | |||
|description=CAGE_peak_16_at_SCHIP1_5end | |||
|id=chr3:159570936..159570956,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.15e-25!24;CL:0000115!2.90e-19!35;CL:0000071!5.33e-19!18;CL:0002546!5.33e-19!18;CL:0002078!1.37e-15!44;CL:0000213!7.72e-13!57;CL:0000215!7.72e-13!57;CL:1000413!1.16e-09!9;CL:0000076!7.34e-08!62;CL:0002543!7.87e-08!6;CL:0005020!8.80e-08!6;CL:0002138!8.80e-08!6;CL:0005022!8.80e-08!6;CL:0002544!3.07e-07!6;CL:0000222!6.25e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.64e-60;24!CL:0000115;1.15e-45;36!CL:0000071;8.64e-41;18!CL:0002078;4.38e-28;45!CL:0002543;2.70e-21;6!CL:0002138;3.17e-21;6!CL:0000213;3.83e-20;58!CL:0000215;3.83e-20;58!CL:0002544;2.92e-14;6!CL:1000413;3.73e-13;9!CL:0002618;5.11e-12;3!CL:0002144;1.06e-11;3!CL:0000076;2.07e-08;63!CL:0000123;1.24e-07;2!CL:0000242;1.24e-07;2!CL:0002188;6.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.14e-60,24;CL:0000115,2.19e-55,36;CL:0002078,5.59e-43,45;CL:0000071,8.08e-41,18;CL:0002546,8.08e-41,18;CL:0000213,7.22e-32,58;CL:0000215,7.22e-32,58;CL:0002543,2.04e-21,6;CL:0005020,2.90e-21,6;CL:0002138,2.90e-21,6;CL:0005022,2.90e-21,6;CL:0002544,4.11e-14,6;CL:1000413,4.17e-13,9;CL:0002618,4.67e-12,3;CL:0000222,5.50e-12,121;CL:0000076,6.16e-12,63;CL:0002144,1.08e-11,3;CL:0000242,1.61e-07,2;CL:0002188,7.76e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;8.64e-41;18!CL:0005022;3.17e-21;6!UBERON:0005062;6.35e-09;4!UBERON:0007284;6.35e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.98e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.88e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.33e-19!18;UBERON:0004638!5.33e-19!18;UBERON:0004852!5.33e-19!18;UBERON:0000487!1.00e-15!22;UBERON:0006914!5.87e-13!25;UBERON:0002049!1.26e-10!79;UBERON:0007798!1.26e-10!79;UBERON:0001009!1.93e-10!113;UBERON:0004872!4.08e-10!84;UBERON:0000055!6.01e-10!69;UBERON:0003915!1.16e-09!9;UBERON:0004700!1.16e-09!9;UBERON:0001917!1.16e-09!9;UBERON:0000119!5.38e-09!312;UBERON:0007023!6.38e-09!115;UBERON:0004535!7.15e-09!110;UBERON:0000483!1.35e-08!309;UBERON:0000477!3.59e-08!286;UBERON:0004111!7.29e-08!241;UBERON:0003103!7.50e-08!69;UBERON:0000480!2.26e-07!626;UBERON:0001638!3.91e-07!9;UBERON:0003920!3.91e-07!9;UBERON:0004582!3.91e-07!9;UBERON:0000467!3.92e-07!625;UBERON:0003914!3.97e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.64e-41;18!UBERON:0001986;8.64e-41;18!UBERON:0004852;8.64e-41;18!UBERON:0000487;1.08e-32;22!UBERON:0006914;2.52e-28;25!UBERON:0000490;1.02e-20;33!UBERON:0001473;9.41e-16;8!UBERON:0004536;9.41e-16;8!UBERON:0006558;9.41e-16;8!UBERON:0001638;5.69e-14;9!UBERON:0003920;5.69e-14;9!UBERON:0004582;5.69e-14;9!UBERON:0000055;2.21e-13;65!UBERON:0003915;3.73e-13;9!UBERON:0004700;3.73e-13;9!UBERON:0001917;3.73e-13;9!UBERON:0007100;6.08e-13;25!UBERON:0002465;1.83e-12;10!UBERON:0004151;3.06e-12;3!UBERON:0003978;9.14e-12;3!UBERON:0000946;9.14e-12;3!UBERON:0010523;1.06e-11;3!UBERON:0001915;1.06e-11;3!UBERON:0001982;1.06e-11;3!UBERON:0001009;1.09e-10;112!UBERON:0007500;1.32e-08;56!UBERON:0001981;1.32e-08;56!UBERON:0004537;1.32e-08;56!UBERON:0002081;1.34e-08;2!UBERON:0005090;1.67e-08;2!UBERON:0001630;1.67e-08;2!UBERON:0002133;2.49e-08;2!UBERON:0004535;5.08e-08;109!UBERON:0000341;9.42e-08;2!UBERON:0002049;1.16e-07;75!UBERON:0007798;1.16e-07;75!UBERON:0002066;2.34e-07;5!UBERON:0000948;2.36e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.08e-41,18;UBERON:0001986,8.08e-41,18;UBERON:0004852,8.08e-41,18;UBERON:0000487,1.02e-32,22;UBERON:0006914,2.40e-28,25;UBERON:0000055,1.96e-26,68;UBERON:0001009,5.71e-25,112;UBERON:0002049,3.26e-22,78;UBERON:0007798,3.26e-22,78;UBERON:0004872,1.73e-20,83;UBERON:0004535,2.19e-20,109;UBERON:0007500,4.92e-17,59;UBERON:0001981,4.92e-17,59;UBERON:0004537,4.92e-17,59;UBERON:0006965,4.92e-17,59;UBERON:0001473,8.83e-16,8;UBERON:0004536,8.83e-16,8;UBERON:0006558,8.83e-16,8;UBERON:0003914,4.43e-14,117;UBERON:0001638,4.74e-14,9;UBERON:0003920,4.74e-14,9;UBERON:0004582,4.74e-14,9;UBERON:0003915,4.17e-13,9;UBERON:0004700,4.17e-13,9;UBERON:0001917,4.17e-13,9;UBERON:0002465,1.74e-12,10;UBERON:0004151,3.48e-12,3;UBERON:0007100,7.45e-12,27;UBERON:0003978,9.66e-12,3;UBERON:0009751,9.66e-12,3;UBERON:0000946,9.66e-12,3;UBERON:0002523,9.66e-12,3;UBERON:0005983,9.66e-12,3;UBERON:0002165,9.66e-12,3;UBERON:0002062,9.66e-12,3;UBERON:0007280,9.66e-12,3;UBERON:0010523,1.08e-11,3;UBERON:0001915,1.08e-11,3;UBERON:0001982,1.08e-11,3;UBERON:0003103,7.90e-10,68;UBERON:0004111,7.10e-09,240;UBERON:0002081,1.50e-08,2;UBERON:0010227,1.50e-08,2;UBERON:0005090,1.67e-08,2;UBERON:0001630,1.67e-08,2;UBERON:0002133,2.68e-08,2;UBERON:0000341,7.26e-08,2;UBERON:0003124,7.64e-08,7;UBERON:0003081,1.57e-07,203;UBERON:0002066,2.22e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,2.98143611050058,3.4409383804245,3.47140501607594,3.39184765154406,0.419499436209906,0.825354125820202,1.8809546988313,5.42675194255591,7.1153252537342,11.7152214467635,5.23678112241891,3.80136052859256,8.05404789908959,1.10298924103761,0.81014194788176,8.30487473041942,7.85852804191594,6.30624290706604,1.53316637465883,4.74632829784064,3.84723662253855,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.49333509683432,0.311211035399766,1.75123873690594,0.490385709340376,0,0,0,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16708818237254,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0.469634776943287,3.75352764178792,3.70388410061289,1.33177906564219,0,0,0,0,0,0,1.17587489739202,0.141775097242386,0.806026704325635,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0,0.300946099727719,0,0,0,0.553107505625109,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.385076685522074,0.784349769176855,0,0.211103257785751,3.4120015221269,1.19065593693561,8.2048048118813,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,10.0253790836027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,3.82801391678303,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,6.42062117839031,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.20390222730132,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.547621515567972,0,0,0,5.30636562417283,7.56229399238556,5.0251111720377,2.59582700648688,8.58452096273142,15.8451734783729,18.8785557687701,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.681909645754975,0,0,0.191915197319445,11.4351252219739,18.5385751702321,0,0,0,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0,0,0,0.320362237703084,0.943225830597996,0,0,0.197611631897944,0.121792598380896,0,0.544017803369474,1.0027595760908,0.612691153526923,0,0,0,0,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0.124980407962107,0,0,0,2.81000943484129,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.385239660814607,0,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0,0.381382095467167,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,1.33053555243958,0,0,0.271878931907327,0.0657727735628491,0,0,0.39246546425257,0,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0,2.26015753993353,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0.118332000730565,0.340853619036631,0,0.22910686854405,0,0,0,0,0,7.12171720906684,8.21302454849976,5.799072156691,0.971421986118279,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,1.71603825227734,0,0.196308467114945,0,0,0,0.281951753939561,0.966868319603658,0,0,0.352894871715692,0,2.92134555298607,0,0.143339583151451,0,0,0,0.529026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| ||
|short_description=p16@SCHIP1 | |||
}} | }} |
Latest revision as of 09:47, 16 September 2015
Short description: | p16@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SCHIP1_5end |
Coexpression cluster: | C4298_heart_left_Endothelial_acute_Renal_skeletal_tongue |
Association with transcript: | 155bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.14e-60 | 24 |
endothelial cell | 2.19e-55 | 36 |
meso-epithelial cell | 5.59e-43 | 45 |
blood vessel endothelial cell | 8.08e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-41 | 18 |
lining cell | 7.22e-32 | 58 |
barrier cell | 7.22e-32 | 58 |
vein endothelial cell | 2.04e-21 | 6 |
lymphangioblast | 2.90e-21 | 6 |
endothelial cell of lymphatic vessel | 2.90e-21 | 6 |
vascular lymphangioblast | 2.90e-21 | 6 |
aortic endothelial cell | 4.11e-14 | 6 |
endothelial cell of artery | 4.17e-13 | 9 |
endothelial cell of umbilical vein | 4.67e-12 | 3 |
mesodermal cell | 5.50e-12 | 121 |
squamous epithelial cell | 6.16e-12 | 63 |
capillary endothelial cell | 1.08e-11 | 3 |
Merkel cell | 1.61e-07 | 2 |
glomerular endothelial cell | 7.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.88e-08 | 2 |