FFCP PHASE1:Hg19::chr3:189027568..189027594,+: Difference between revisions
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|id=chr3:189027568..189027594,+
|short_description=p3@TPRG1
|description=CAGE_peak_3_at_TPRG1_5end
|association_with_transcript=-88bp_to_ENST00000481307_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285386 | |EntrezGene=285386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |HGNC=24759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_ENST00000481307_5end | |||
|cluster_id=chr3:189027568..189027594,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_3_at_TPRG1_5end | |||
|id=chr3:189027568..189027594,+ | |||
|ontology_enrichment_celltype=CL:0000080!3.57e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!4.85e-07!1;DOID:0060061!4.85e-07!1;DOID:8691!4.85e-07!1;DOID:5662!6.80e-07!1;DOID:3151!9.48e-07!1;DOID:3149!9.48e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.61e-26;1!DOID:0060061;4.61e-26;1!DOID:8691;4.61e-26;1!DOID:4074;1.07e-13;2!DOID:4905;1.07e-13;2!DOID:3498;1.07e-13;2!DOID:1793;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.61e-26,1;DOID:0060061,4.61e-26,1;DOID:8691,4.61e-26,1;DOID:4074,1.07e-13,2;DOID:4905,1.07e-13,2;DOID:3498,1.07e-13,2;DOID:1793,1.69e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.52e-23;10!UBERON:0000178;1.02e-15;15!UBERON:0000179;1.02e-15;15!UBERON:0000463;1.02e-15;15!UBERON:0000478;4.35e-10;24!UBERON:0002390;8.44e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.52e-23,10;UBERON:0000358,3.52e-23,10;UBERON:0000307,3.52e-23,10;UBERON:0000091,3.52e-23,10;UBERON:0000087,3.52e-23,10;UBERON:0007010,3.52e-23,10;UBERON:0007806,3.52e-23,10;UBERON:0008780,3.52e-23,10;UBERON:0005728,3.52e-23,10;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0000478,4.35e-10,24 | |||
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|short_description=p3@TPRG1 | |||
}} | }} |
Latest revision as of 08:56, 17 September 2015
Short description: | p3@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPRG1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -88bp_to_ENST00000481307_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.52e-23 | 10 |
blastocyst | 3.52e-23 | 10 |
blastula | 3.52e-23 | 10 |
bilaminar disc | 3.52e-23 | 10 |
inner cell mass | 3.52e-23 | 10 |
cleaving embryo | 3.52e-23 | 10 |
connecting stalk | 3.52e-23 | 10 |
inner cell mass derived epiblast | 3.52e-23 | 10 |
extraembryonic mesoderm | 3.52e-23 | 10 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
extraembryonic structure | 4.35e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.61e-26 | 1 |
cutaneous T cell lymphoma | 4.61e-26 | 1 |
mycosis fungoides | 4.61e-26 | 1 |
pancreas adenocarcinoma | 1.07e-13 | 2 |
pancreatic carcinoma | 1.07e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.07e-13 | 2 |
pancreatic cancer | 1.69e-07 | 4 |