FFCP PHASE1:Hg19::chr3:56207965..56207974,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:56207965..56207974,-
|short_description=p16@ERC2
|description=CAGE_peak_16_at_ERC2_5end
|association_with_transcript=-38bp_to_ENST00000484857_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26059 | |EntrezGene=26059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31922 | |HGNC=31922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000484857_5end | |||
|cluster_id=chr3:56207965..56207974,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_16_at_ERC2_5end | |||
|id=chr3:56207965..56207974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,5.73e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!7.98e-10!1;DOID:0070004!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.23e-66;1!DOID:0070004;1.23e-66;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.23e-66,1;DOID:0070004,1.23e-66,1 | |||
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|short_description=p16@ERC2 | |||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p16@ERC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ERC2_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -38bp_to_ENST00000484857_5end |
EntrezGene: | ERC2 |
HGNC: | 31922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
gyrus | 1.52e-44 | 6 |
middle frontal gyrus | 5.04e-34 | 2 |
middle temporal gyrus | 7.05e-34 | 2 |
frontal cortex | 3.27e-23 | 3 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
temporal lobe | 9.89e-11 | 6 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.23e-66 | 1 |
myeloma | 1.23e-66 | 1 |