FFCP PHASE1:Hg19::chr4:187647683..187647690,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:187647683..187647690,-
|short_description=p16@FAT1
|description=CAGE_peak_16_at_FAT1_5end
|association_with_transcript=159bp_to_uc010iso.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2195 | |EntrezGene=2195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3595 | |HGNC=3595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=159bp_to_uc010iso.1_5end | |||
|cluster_id=chr4:187647683..187647690,- | |||
|description=CAGE_peak_16_at_FAT1_5end | |||
|id=chr4:187647683..187647690,- | |||
|ontology_enrichment_celltype=CL:0002076!1.29e-08!43;CL:0000223!1.26e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.38e-31;3!CL:0002159;1.36e-26;14!CL:0000317;3.00e-22;2!CL:1000448;3.00e-22;2!CL:0002308;3.00e-22;2!CL:0002140;3.00e-22;2!CL:0002621;4.93e-15;3!CL:0000362;2.88e-11;9!CL:0002077;1.56e-09;34!CL:0000622;1.80e-09;5!CL:0000154;4.90e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.65e-32,3;CL:0002159,7.13e-27,14;CL:0000317,1.66e-22,2;CL:1000448,1.66e-22,2;CL:0002308,1.66e-22,2;CL:0002140,1.66e-22,2;CL:0002621,4.28e-15,3;CL:0000362,2.34e-11,9;CL:0002077,7.32e-11,34;CL:0000622,1.42e-09,5;CL:0000154,4.04e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.01e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;4.29e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.05e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.11e-08!95;UBERON:0000475!4.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.09e-24;4!UBERON:0008895;7.09e-24;4!UBERON:0002419;3.00e-22;2!UBERON:0007771;3.00e-22;2!UBERON:0003297;3.00e-22;2!UBERON:0001821;3.00e-22;2!UBERON:0003487;3.00e-22;2!UBERON:0001820;3.00e-22;2!UBERON:0011159;3.07e-19;5!UBERON:0001949;4.93e-15;3!UBERON:0001831;1.01e-11;1!UBERON:0001567;1.01e-11;1!UBERON:0011137;4.60e-09;11!UBERON:0010323;4.60e-09;11!UBERON:0010371;1.80e-08;31!UBERON:0001003;5.87e-07;15!UBERON:0007376;5.87e-07;15!UBERON:0003929;6.02e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.63e-24,4;UBERON:0008895,3.63e-24,4;UBERON:0002419,1.66e-22,2;UBERON:0007771,1.66e-22,2;UBERON:0003297,1.66e-22,2;UBERON:0001821,1.66e-22,2;UBERON:0003487,1.66e-22,2;UBERON:0001820,1.66e-22,2;UBERON:0005089,1.66e-22,2;UBERON:0005088,1.66e-22,2;UBERON:0011159,1.80e-19,5;UBERON:0010188,2.47e-16,6;UBERON:0002539,2.47e-16,6;UBERON:0008816,2.47e-16,6;UBERON:0001949,4.28e-15,3;UBERON:0001831,1.63e-11,1;UBERON:0001567,1.63e-11,1;UBERON:0008801,1.63e-11,1;UBERON:0003102,2.42e-11,99;UBERON:0010323,3.63e-09,11;UBERON:0011137,2.62e-07,14;UBERON:0001003,5.19e-07,15;UBERON:0007376,5.19e-07,15;UBERON:0007383,5.19e-07,15 | |||
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| ||
|short_description=p16@FAT1 | |||
}} | }} |
Latest revision as of 05:29, 17 September 2015
Short description: | p16@FAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_uc010iso.1_5end |
EntrezGene: | FAT1 |
HGNC: | 3595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.65e-32 | 3 |
general ecto-epithelial cell | 7.13e-27 | 14 |
sebum secreting cell | 1.66e-22 | 2 |
epithelial cell of sweat gland | 1.66e-22 | 2 |
epithelial cell of skin gland | 1.66e-22 | 2 |
acinar cell of sebaceous gland | 1.66e-22 | 2 |
gingival epithelial cell | 4.28e-15 | 3 |
epidermal cell | 2.34e-11 | 9 |
ecto-epithelial cell | 7.32e-11 | 34 |
acinar cell | 1.42e-09 | 5 |
protein secreting cell | 4.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.63e-24 | 4 |
splanchnocranium | 3.63e-24 | 4 |
skin gland | 1.66e-22 | 2 |
epidermis gland | 1.66e-22 | 2 |
gland of integumental system | 1.66e-22 | 2 |
sebaceous gland | 1.66e-22 | 2 |
skin sebaceous gland | 1.66e-22 | 2 |
sweat gland | 1.66e-22 | 2 |
sweat gland placode | 1.66e-22 | 2 |
sebaceous gland placode | 1.66e-22 | 2 |
primary subdivision of cranial skeletal system | 1.80e-19 | 5 |
protuberance | 2.47e-16 | 6 |
pharyngeal arch | 2.47e-16 | 6 |
embryonic head | 2.47e-16 | 6 |
gingival epithelium | 4.28e-15 | 3 |
parotid gland | 1.63e-11 | 1 |
cheek | 1.63e-11 | 1 |
parotid gland primordium | 1.63e-11 | 1 |
surface structure | 2.42e-11 | 99 |
cranial skeletal system | 3.63e-09 | 11 |
axial skeletal system | 2.62e-07 | 14 |
skin epidermis | 5.19e-07 | 15 |
outer epithelium | 5.19e-07 | 15 |
enveloping layer of ectoderm | 5.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.05e-12 | 1 |