FFCP PHASE1:Hg19::chr4:95575427..95575440,+: Difference between revisions
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|id=chr4:95575427..95575440,+
|short_description=p@chr4:95575427..95575440,+
|description=CAGE_peak_at_chr4:95575427..95575440,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:95575427..95575440,+ | |||
|coexpression_cluster_id=C4442 | |||
|description=CAGE_peak_at_chr4:95575427..95575440,+ | |||
|id=chr4:95575427..95575440,+ | |||
|ontology_enrichment_celltype=CL:0002537!2.75e-10!5;CL:0002541!2.67e-08!3;CL:0000349!3.95e-08!3;CL:0002577!3.95e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.44e-33;19!CL:0002541;9.08e-19;3!CL:0002577;2.32e-18;3!CL:0002537;1.31e-11;5!CL:0002097;8.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.44e-33,19;CL:0002541,8.69e-19,3;CL:0002577,2.32e-18,3;CL:0002537,1.35e-11,5;CL:0002097,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.75e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.60e-23!14;UBERON:0000158!1.60e-23!14;UBERON:0003124!2.96e-19!7;UBERON:0000478!9.33e-17!24;UBERON:0001987!1.04e-12!4;UBERON:0004340!1.04e-12!4;UBERON:0000476!2.67e-08!3;UBERON:0000920!2.67e-08!3;UBERON:0000077!7.81e-08!130;UBERON:0000305!1.82e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.19e-34;24!UBERON:0001987;8.59e-30;4!UBERON:0005631;1.42e-21;10!UBERON:0000158;1.42e-21;10!UBERON:0003124;9.08e-19;3!UBERON:0000920;9.08e-19;3!UBERON:0000305;1.50e-08;7!UBERON:0000077;4.84e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.02e-46,7;UBERON:0005631,2.21e-45,14;UBERON:0000158,2.21e-45,14;UBERON:0000478,2.09e-34,24;UBERON:0001987,7.78e-30,4;UBERON:0004340,7.78e-30,4;UBERON:0000920,8.69e-19,3;UBERON:0004923,2.94e-09,66;UBERON:0000305,1.53e-08,7;UBERON:0004871,1.40e-07,8;UBERON:0000077,1.65e-07,29 | |||
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|short_description=p@chr4:95575427..95575440,+ | |||
}} | }} |
Latest revision as of 08:10, 30 July 2015
Short description: | p@chr4:95575427..95575440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:95575427..95575440, + |
Coexpression cluster: | C4442_bile_Mesenchymal_lung_neuroblastoma_prostate_chorionic_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.44e-33 | 19 |
chorionic membrane mesenchymal stem cell | 8.69e-19 | 3 |
placental epithelial cell | 2.32e-18 | 3 |
amnion mesenchymal stem cell | 1.35e-11 | 5 |
cortical cell of adrenal gland | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.02e-46 | 7 |
extraembryonic membrane | 2.21e-45 | 14 |
membranous layer | 2.21e-45 | 14 |
extraembryonic structure | 2.09e-34 | 24 |
placenta | 7.78e-30 | 4 |
allantois | 7.78e-30 | 4 |
egg chorion | 8.69e-19 | 3 |
organ component layer | 2.94e-09 | 66 |
amnion | 1.53e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.40e-07 | 8 |
mixed endoderm/mesoderm-derived structure | 1.65e-07 | 29 |