FFCP PHASE1:Hg19::chr5:146257992..146258003,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:146257992..146258003,-
|short_description=p18@PPP2R2B
|description=CAGE_peak_18_at_PPP2R2B_5end
|association_with_transcript=140bp_to_ENST00000512639_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5521 | |EntrezGene=5521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9305 | |HGNC=9305 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCT7 | |UniProt=E9PCT7 | ||
|association_with_transcript=140bp_to_ENST00000512639_5end | |||
|cluster_id=chr5:146257992..146258003,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_18_at_PPP2R2B_5end | |||
|id=chr5:146257992..146258003,- | |||
|ontology_enrichment_celltype=CL:0000047!2.11e-16!8;CL:0000540!8.09e-13!6;CL:0000031!8.09e-13!6;CL:0000404!8.09e-13!6;CL:0002319!4.09e-12!25;CL:0002322!1.95e-10!5;CL:0000791!1.96e-09!18;CL:0000789!1.96e-09!18;CL:0002420!1.96e-09!18;CL:0002419!1.96e-09!18;CL:0000790!1.96e-09!18;CL:0000133!1.21e-07!59;CL:0000625!6.54e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.47e-42;6!CL:0000404;2.47e-42;6!CL:0002322;1.69e-22;5!CL:0002319;9.75e-16;25!CL:0000047;4.16e-15;2!CL:0002321;1.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.99e-55,8;CL:0000540,2.48e-42,6;CL:0000031,2.48e-42,6;CL:0000404,2.48e-42,6;CL:0002322,1.44e-22,5;CL:0002319,1.15e-15,25;CL:0000133,7.06e-10,59;CL:0000221,7.57e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.47e-42;6!UBERON:0010122;1.68e-14;2!CL:0000133;6.26e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.04e-53!86;UBERON:0000073!1.22e-50!94;UBERON:0001016!1.22e-50!94;UBERON:0001017!1.46e-48!82;UBERON:0001049!8.40e-40!57;UBERON:0005068!8.40e-40!57;UBERON:0006241!8.40e-40!57;UBERON:0007135!8.40e-40!57;UBERON:0000955!7.82e-36!69;UBERON:0006238!7.82e-36!69;UBERON:0002780!1.32e-34!41;UBERON:0001890!1.32e-34!41;UBERON:0006240!1.32e-34!41;UBERON:0002616!8.19e-34!59;UBERON:0003080!1.46e-33!42;UBERON:0003075!9.62e-33!86;UBERON:0007284!9.62e-33!86;UBERON:0003056!4.98e-32!61;UBERON:0001869!6.20e-32!32;UBERON:0001893!6.60e-32!34;UBERON:0002020!8.07e-32!34;UBERON:0003528!8.07e-32!34;UBERON:0002346!1.16e-30!90;UBERON:0002791!2.34e-30!33;UBERON:0004121!5.59e-27!169;UBERON:0000924!6.13e-26!173;UBERON:0006601!6.13e-26!173;UBERON:0000033!4.82e-24!123;UBERON:0000956!6.65e-24!25;UBERON:0000203!6.65e-24!25;UBERON:0000153!1.81e-23!129;UBERON:0007811!1.81e-23!129;UBERON:0002619!5.06e-20!22;UBERON:0001950!1.17e-19!20;UBERON:0007023!5.45e-15!115;UBERON:0002308!2.69e-09!9;UBERON:0000125!2.69e-09!9;UBERON:0000369!1.36e-08!4;UBERON:0002435!1.36e-08!4;UBERON:0000204!1.36e-08!4;UBERON:0010082!1.36e-08!4;UBERON:0000966!2.48e-08!5;UBERON:0005388!2.48e-08!5;UBERON:0001802!2.48e-08!5;UBERON:0001871!9.06e-08!7;UBERON:0003076!1.01e-07!15;UBERON:0003057!1.01e-07!15;UBERON:0000064!1.61e-07!219;UBERON:0002420!2.46e-07!9;UBERON:0007245!2.46e-07!9;UBERON:0010009!2.46e-07!9;UBERON:0010011!2.46e-07!9;UBERON:0000454!2.46e-07!9;UBERON:0000200!4.40e-07!6;UBERON:0000025!6.00e-07!194;UBERON:0005383!8.20e-07!3;UBERON:0005382!8.20e-07!3;UBERON:0009663!9.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.35e-17;32!UBERON:0001869;3.74e-17;32!UBERON:0002780;1.12e-16;41!UBERON:0001890;1.12e-16;41!UBERON:0003528;1.55e-16;34!UBERON:0002020;1.55e-16;34!UBERON:0000369;8.44e-16;4!UBERON:0002435;8.44e-16;4!UBERON:0000204;8.44e-16;4!UBERON:0001893;1.94e-15;34!UBERON:0001950;2.45e-15;20!UBERON:0000007;1.68e-14;2!UBERON:0001873;1.68e-14;2!UBERON:0002619;6.19e-14;22!UBERON:0000956;3.11e-12;25!UBERON:0000203;3.11e-12;25!UBERON:0002420;3.14e-12;9!UBERON:0007245;3.14e-12;9!UBERON:0010009;3.14e-12;9!UBERON:0010011;3.14e-12;9!UBERON:0000454;3.14e-12;9!UBERON:0000073;6.58e-12;53!UBERON:0002616;6.58e-12;53!UBERON:0000955;4.23e-10;68!UBERON:0005383;5.67e-10;3!UBERON:0005382;5.67e-10;3!UBERON:0001016;1.65e-09;83!UBERON:0009663;2.94e-09;7!UBERON:0001017;3.79e-09;75!UBERON:0002902;4.25e-08;1!UBERON:0001882;4.25e-08;1!UBERON:0002022;4.25e-08;1!UBERON:0009899;4.25e-08;1!UBERON:0005403;4.25e-08;1!UBERON:0003296;1.08e-07;4!UBERON:0010133;1.08e-07;4!UBERON:0000125;2.64e-07;9!UBERON:0002308;2.64e-07;9!UBERON:0000922;5.65e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.21e-33,81;UBERON:0001016,3.25e-29,89;UBERON:0002780,3.13e-21,41;UBERON:0001890,3.13e-21,41;UBERON:0003080,3.13e-21,41;UBERON:0006240,3.13e-21,41;UBERON:0002791,3.31e-19,32;UBERON:0001869,3.31e-19,32;UBERON:0003528,5.15e-18,34;UBERON:0002020,5.15e-18,34;UBERON:0001893,5.15e-18,34;UBERON:0000073,4.98e-16,53;UBERON:0002616,4.98e-16,53;UBERON:0000369,6.72e-16,4;UBERON:0002435,6.72e-16,4;UBERON:0000204,6.72e-16,4;UBERON:0010082,6.72e-16,4;UBERON:0001950,1.96e-15,20;UBERON:0001049,4.53e-15,56;UBERON:0005068,4.53e-15,56;UBERON:0006241,4.53e-15,56;UBERON:0007135,4.53e-15,56;UBERON:0001873,1.47e-14,2;UBERON:0010122,1.47e-14,2;UBERON:0000007,3.35e-14,2;UBERON:0000955,4.48e-14,68;UBERON:0006238,4.48e-14,68;UBERON:0002619,5.07e-14,22;UBERON:0003056,1.11e-13,61;UBERON:0004121,1.50e-13,171;UBERON:0000924,1.50e-13,171;UBERON:0006601,1.50e-13,171;UBERON:0002420,2.27e-12,9;UBERON:0007245,2.27e-12,9;UBERON:0010009,2.27e-12,9;UBERON:0010011,2.27e-12,9;UBERON:0000454,2.27e-12,9;UBERON:0000956,2.61e-12,25;UBERON:0000203,2.61e-12,25;UBERON:0011216,1.26e-10,223;UBERON:0005383,5.18e-10,3;UBERON:0005382,5.18e-10,3;UBERON:0003075,1.14e-09,82;UBERON:0007284,1.14e-09,82;UBERON:0009663,2.58e-09,7;UBERON:0002346,3.98e-09,86;UBERON:0001882,3.57e-08,1;UBERON:0005403,3.57e-08,1;UBERON:0002022,3.83e-08,1;UBERON:0002902,5.43e-08,1;UBERON:0009899,5.43e-08,1;UBERON:0003296,1.52e-07,4;UBERON:0010133,1.52e-07,4;UBERON:0000125,2.39e-07,9;UBERON:0002308,2.39e-07,9;UBERON:0010371,3.38e-07,104 | |||
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| ||
|short_description=p18@PPP2R2B | |||
}} | }} |
Latest revision as of 21:06, 15 September 2015
Short description: | p18@PPP2R2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PPP2R2B_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 140bp_to_ENST00000512639_5end |
EntrezGene: | PPP2R2B |
HGNC: | 9305 |
UniProt: | E9PCT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.99e-55 | 8 |
neuron | 2.48e-42 | 6 |
neuroblast | 2.48e-42 | 6 |
electrically signaling cell | 2.48e-42 | 6 |
embryonic stem cell | 1.44e-22 | 5 |
neural cell | 1.15e-15 | 25 |
neurectodermal cell | 7.06e-10 | 59 |
ectodermal cell | 7.57e-08 | 72 |