FFCP PHASE1:Hg19::chr5:169724839..169724855,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:169724839..169724855,-
|short_description=p3@LCP2
|description=CAGE_peak_3_at_LCP2_5end
|association_with_transcript=-17bp_to_NM_005565,uc003man.1,uc011det...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3937 | |EntrezGene=3937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |HGNC=6529 | ||
|TSSclassifier=strong | |||
|UniProt=Q13094 | |UniProt=Q13094 | ||
|association_with_transcript=-17bp_to_NM_005565,uc003man.1,uc011det.1_5end | |||
|cluster_id=chr5:169724839..169724855,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_LCP2_5end | |||
|id=chr5:169724839..169724855,- | |||
|ontology_enrichment_celltype=CL:0000037!4.88e-93!172;CL:0000566!4.88e-93!172;CL:0000988!1.48e-91!182;CL:0002032!6.99e-88!165;CL:0000837!6.99e-88!165;CL:0000738!6.46e-74!140;CL:0000763!6.11e-68!112;CL:0000049!6.11e-68!112;CL:0002031!1.85e-63!124;CL:0002087!5.72e-59!119;CL:0000766!6.75e-51!76;CL:0000557!1.53e-45!71;CL:0000839!3.06e-44!70;CL:0002009!7.59e-41!65;CL:0002194!8.23e-40!63;CL:0000576!8.23e-40!63;CL:0000040!8.23e-40!63;CL:0000559!8.23e-40!63;CL:0002057!5.93e-36!42;CL:0000860!4.88e-33!45;CL:0000838!2.59e-17!52;CL:0000542!1.17e-16!53;CL:0000051!1.17e-16!53;CL:0000134!2.43e-16!358;CL:0002320!9.97e-16!365;CL:0000084!1.55e-12!25;CL:0000827!1.55e-12!25;CL:0000219!2.36e-11!390;CL:0000791!1.88e-09!18;CL:0000789!1.88e-09!18;CL:0002420!1.88e-09!18;CL:0002419!1.88e-09!18;CL:0000790!1.88e-09!18;CL:0002393!2.05e-08!9;CL:0002397!2.05e-08!9;CL:0000094!4.78e-08!8;CL:0000048!3.10e-07!430;CL:0000034!7.01e-07!444;CL:0000625!8.42e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.70e-35;33!CL:0002057;8.70e-35;33!CL:0000473;1.52e-33;39!CL:0000234;1.52e-33;39!CL:0000576;6.28e-33;48!CL:0000766;1.89e-30;69!CL:0000763;5.99e-26;100!CL:0002087;6.54e-20;104!CL:0000738;5.64e-18;136!CL:0000988;6.89e-18;177!CL:0000084;5.90e-16;25!CL:0000791;8.56e-12;18!CL:0000789;8.56e-12;18!CL:0002419;8.56e-12;18!CL:0000094;2.90e-10;8!CL:0000625;1.72e-08;11!CL:0000542;3.62e-08;53!CL:0000081;4.16e-08;11!CL:0002393;5.95e-08;6!CL:0002397;5.95e-08;6!CL:0000219;7.07e-08;193!CL:0000235;9.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.70e-112,168;CL:0000988,5.70e-109,177;CL:0002032,2.07e-105,161;CL:0000837,2.07e-105,161;CL:0000738,6.95e-91,136;CL:0000763,7.87e-88,108;CL:0000049,7.87e-88,108;CL:0002031,4.72e-79,120;CL:0002087,1.61e-74,115;CL:0000766,1.34e-73,72;CL:0000557,3.23e-66,67;CL:0000839,5.03e-63,66;CL:0002009,7.89e-60,61;CL:0002194,1.81e-58,59;CL:0000576,1.81e-58,59;CL:0000040,1.81e-58,59;CL:0000559,1.81e-58,59;CL:0000473,3.39e-53,48;CL:0000234,3.39e-53,48;CL:0000860,9.34e-48,42;CL:0002057,9.34e-48,42;CL:0000134,5.26e-31,354;CL:0002320,1.63e-29,361;CL:0000219,2.59e-24,386;CL:0000048,1.49e-18,427;CL:0000034,2.55e-18,441;CL:0000723,1.06e-17,433;CL:0000838,1.45e-16,52;CL:0000084,2.84e-16,25;CL:0000827,2.84e-16,25;CL:0000542,5.01e-16,53;CL:0000051,5.01e-16,53;CL:0000791,3.87e-12,18;CL:0000789,3.87e-12,18;CL:0002420,3.87e-12,18;CL:0002419,3.87e-12,18;CL:0000790,3.87e-12,18;CL:0002393,9.47e-11,9;CL:0002397,9.47e-11,9;CL:0000094,2.93e-10,8;CL:0000625,1.36e-08,11;CL:0000081,3.76e-08,11;CL:0000235,9.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-34;42!CL:0000049;1.82e-23;108!CL:0000790;8.56e-12;18!CL:0000051;3.62e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!1.18e-17!39;DOID:8692!7.38e-16!31;DOID:2531!1.42e-15!51;DOID:0060083!1.42e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.06e-17;31!DOID:1240;2.20e-15;39!DOID:2531;1.74e-11;51!DOID:0060083;1.74e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.19e-20,39;DOID:8692,2.25e-18,31;DOID:2531,3.50e-18,51;DOID:0060083,3.50e-18,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.42e-50!102;UBERON:0003061!2.42e-50!102;UBERON:0002193!1.49e-46!112;UBERON:0002371!1.74e-39!80;UBERON:0001474!1.93e-34!86;UBERON:0002405!1.39e-29!115;UBERON:0004765!2.61e-25!101;UBERON:0001434!2.61e-25!101;UBERON:0002384!4.83e-15!375;UBERON:0007023!4.41e-14!115;UBERON:0003081!1.12e-11!216;UBERON:0000178!1.02e-08!15;UBERON:0000179!1.02e-08!15;UBERON:0000463!1.02e-08!15;UBERON:0002204!2.22e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.64e-11;15!UBERON:0000179;2.64e-11;15!UBERON:0000463;2.64e-11;15!UBERON:0002390;1.14e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.54e-74,98;UBERON:0003061,7.54e-74,98;UBERON:0002193,2.28e-68,108;UBERON:0002371,9.09e-59,76;UBERON:0002405,9.07e-57,93;UBERON:0001474,1.66e-52,82;UBERON:0004765,1.76e-45,90;UBERON:0001434,2.51e-38,100;UBERON:0002384,3.27e-28,371;UBERON:0003081,4.14e-22,203;UBERON:0002204,4.77e-14,167;UBERON:0000178,2.16e-11,15;UBERON:0000179,2.16e-11,15;UBERON:0000463,2.16e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41210035755127,5.99334302984604,7.08397031823113,33.0425992553079,26.8680578668049,32.511385896376,0,0,0,0,0.426507697462265,3.22960483268332,137.390861315906,119.925579587145,72.4816308190945,6.26963327871788,4.53451132426571,4.12120908214698,23.1183199659508,42.6999816368355,24.7435742411573,78.09615640031,73.5990519559068,83.3110137707829,102.418491666686,86.0699973937778,99.5590187830944,146.516914313063,120.705635830175,111.04971900736,63.6259107654004,55.3999484617427,68.5406627557508,144.471597199066,165.92030699834,155.998258694966,40.2418586227794,55.4508968188137,47.3109473091291,136.978760632692,102.129340444405,122.695983052128,71.6058695981718,80.8298523551312,103.816267769046,111.39350848454,153.940051842802,123.736793489386,19.8579969133225,22.5360557962946,21.8044991328711,13.1424498441399,11.4134438559545,16.3940098431022,19.0958538306637,13.7252507267372,15.3437889162293,0,0.546138611262131,1.77901850772711,2.56038133539904,0.800791974072025,0,0.661044872784862,0.954053754535364,0.569212969109448,3.52342313622563,0.764546456250458,3.96513985737078,26.3439024601322,2.10707267820062,3.93419540227666,1.96505381374582,3.08402248499264,0.167186495390678,1.95553359980154,4.2610302516126,0,3.11949279278486,2.3568472597987,2.21533894583621,0.812411591295047,1.0247305578054,0.910415432919148,2.46656856905514,1.10540007114339,2.02862160014537,1.77943875794473,1.33770414044857,2.09071047609954,1.69964014046349,1.91610246800961,1.03088233644789,3.03623630423403,3.82278497188916,5.20866763085135,2.85135613334512,4.36667845325541,4.47953139040464,2.49861453104692,3.55165878066025,4.10563998460523,4.83856183739358,5.61624411145365,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,4.54366351116557,2.61194605948901,4.52057065764142,7.87019060207628,2.85997455390064,2.60020250930695,0,0,0,0,0,0.275118041940067,0,0,1.06729878806013,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,168.678934318161,259.812776979378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,2.95262181849859,0,0,0,0,0,1.77236972004421,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1100292252337,18.9543454762783,9.95828787334479,0,0,0,0,0,0,33.5011001769242,23.9491740515975,35.8677639885536,32.5711094722333,22.4711531498956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,10.9461402577071,4.01805673145701,14.7583757638122,0,0,0,0,0,0,1.79336230389644,9.85153801009636,5.39068937148793,4.62034930607094,0.254094624222463,0,0,0.167516265334349,0,66.6616251312992,38.8909896965232,59.2614184213531,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,13.2331536718648,20.9242774794058,18.250412384389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,1.53481913652154,0.522870902049801,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,3.38917682796405,0,0,0,0,9.64150457541122,5.35246044999663,8.54470780761244,6.4322579373603,7.81588318863769,8.43015304550532,7.02040868409549,7.13812658664843,0,0,0,0,0.28853842595289,3.84165954081436,1.75368900001705,6.38653988585013,1.53204296105893,1.69338866179106,2.27235358192189,2.80797178113459,3.42352018549788,9.08743395483535,2.50634477090067,1.69291777801603,2.08764497634809,2.42159648629257,6.38769356535489,10.3051603426729,11.3679082794129,10.0654248551587,10.6783450695621,6.83858333907141,11.1362469558097,4.92349595790849,7.57275899732753,1.6653598399891,4.22961015263549,0,3.95572084034114,0,4.01196183398922,0,0,0.890894042497916,0,0,0.422008249231538,0,1.15362711958732,0,0.597743964753209,0.828851746593443,0,0,11.5699717133405,0,0,0,4.60415133204185,0.789147245095469,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0.533034776018635,3.06579894587209,2.19772358953035,4.15529204750391,0.902382642468723,0.588187602953219,2.01385904371011,1.3282761290693,5.40384368533288,0,0,0,0,0,0.796118080530053,0.611030144933625,1.77912677208373,2.96553453471607,3.44592433368003,0.539209063845416,0.802577647298789,0.468528891450678,0,0,0,0,2.41981432097328,0,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.0967563312890851,0,0,0.678923115418936,0,0.225980740780532,0,0,0.316553979779393,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0.821432273351958,5.10986352267889,0,4.99485973130698,0,1.14580212005842,2.15361907373044,0,0,0.446342914883745,0.53746777989381,0,0,0,0,0,0,4.06431993915765,1.59045937961861,0.408610218334727,0,0,0,5.39937339723601,2.32140586367385,0.42524689660617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| ||
|short_description=p3@LCP2 | |||
}} | }} |
Latest revision as of 21:30, 16 September 2015
Short description: | p3@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LCP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -17bp_to_NM_005565, uc003man.1, uc011det.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | Q13094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.54e-74 | 98 |
blood island | 7.54e-74 | 98 |
hemolymphoid system | 2.28e-68 | 108 |
bone marrow | 9.09e-59 | 76 |
immune system | 9.07e-57 | 93 |
bone element | 1.66e-52 | 82 |
skeletal element | 1.76e-45 | 90 |
skeletal system | 2.51e-38 | 100 |
connective tissue | 3.27e-28 | 371 |
lateral plate mesoderm | 4.14e-22 | 203 |
musculoskeletal system | 4.77e-14 | 167 |
blood | 2.16e-11 | 15 |
haemolymphatic fluid | 2.16e-11 | 15 |
organism substance | 2.16e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.19e-20 | 39 |
myeloid leukemia | 2.25e-18 | 31 |
hematologic cancer | 3.50e-18 | 51 |
immune system cancer | 3.50e-18 | 51 |