FFCP PHASE1:Hg19::chr5:68711076..68711103,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:68711076..68711103,+
|short_description=p3@MARVELD2
|description=CAGE_peak_3_at_MARVELD2_5end
|association_with_transcript=20bp_to_ENST00000515844_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=153562 | |EntrezGene=153562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26401 | |HGNC=26401 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAH8 | |UniProt=D6RAH8 | ||
|association_with_transcript=20bp_to_ENST00000515844_5end | |||
|cluster_id=chr5:68711076..68711103,+ | |||
|coexpression_cluster_id=C3586 | |||
|description=CAGE_peak_3_at_MARVELD2_5end | |||
|id=chr5:68711076..68711103,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.90e-32!254;CL:0000223!2.70e-24!59;CL:0002076!7.45e-21!43;CL:0002251!3.66e-11!21;CL:0002368!1.91e-08!13;CL:0000082!3.38e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.30e-15;42!CL:0002251;1.96e-10;20!CL:0002368;5.42e-09;13!CL:0000082;1.29e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.94e-24,58;CL:0002076,1.34e-21,42;CL:0000066,3.03e-17,253;CL:0002251,1.96e-10,20;CL:0002368,4.32e-09,13;CL:0000082,8.77e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.91e-14;58!UBERON:0001041;7.25e-12;30!UBERON:0006595;8.27e-08;86!UBERON:0008947;1.34e-07;29 | |||
|ontology_enrichment_disease=DOID:305!7.03e-27!106;DOID:0050687!1.11e-17!143;DOID:1749!6.50e-12!14;DOID:299!2.65e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.95e-10;14!DOID:299;1.41e-08;25!DOID:5093;3.66e-08;4!DOID:1612;3.66e-08;4!DOID:0050615;9.93e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.31e-15,106;DOID:0050687,1.33e-10,143;DOID:1749,3.14e-10,14;DOID:299,1.32e-08,25;DOID:5093,3.66e-08,4;DOID:1612,3.66e-08,4;DOID:0050615,7.69e-08,16;DOID:1324,7.32e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.24e-29!169;UBERON:0000925!3.24e-29!169;UBERON:0006595!3.24e-29!169;UBERON:0001007!1.17e-24!155;UBERON:0001555!1.17e-24!155;UBERON:0007026!1.17e-24!155;UBERON:0004921!5.00e-22!129;UBERON:0004185!5.00e-22!129;UBERON:0005911!1.01e-19!82;UBERON:0000077!1.42e-19!130;UBERON:0000466!1.32e-18!126;UBERON:0001041!9.96e-15!98;UBERON:0001004!4.44e-14!72;UBERON:0005177!4.91e-14!107;UBERON:0000464!4.93e-14!104;UBERON:0005153!6.24e-13!37;UBERON:0009569!1.30e-12!113;UBERON:0002530!4.68e-12!59;UBERON:0002365!1.68e-11!31;UBERON:0002330!1.68e-11!31;UBERON:0005178!2.44e-11!34;UBERON:0002224!2.44e-11!34;UBERON:0005181!8.36e-11!35;UBERON:0003929!2.87e-10!54;UBERON:0005157!1.31e-09!51;UBERON:0000062!1.47e-09!511;UBERON:0002048!1.48e-09!22;UBERON:0000117!1.48e-09!22;UBERON:0000171!1.48e-09!22;UBERON:0000170!1.48e-09!22;UBERON:0005597!1.48e-09!22;UBERON:0000118!1.48e-09!22;UBERON:0000065!5.08e-09!53;UBERON:0003104!1.58e-08!238;UBERON:0009142!1.58e-08!238;UBERON:0000915!2.12e-08!52;UBERON:0000161!2.93e-08!35;UBERON:0000344!6.52e-08!12;UBERON:0004807!7.99e-08!28;UBERON:0005156!1.23e-07!59;UBERON:0000990!1.23e-07!59;UBERON:0008947!1.69e-07!38;UBERON:0003258!1.69e-07!38;UBERON:0001048!2.20e-07!168;UBERON:0004802!3.38e-07!19;UBERON:0000115!3.38e-07!19;UBERON:0000468!3.97e-07!659;UBERON:0009497!4.15e-07!25;UBERON:0000015!4.15e-07!25;UBERON:0002423!4.15e-07!25;UBERON:0006235!4.15e-07!25;UBERON:0004161!4.15e-07!25;UBERON:0000481!5.49e-07!347;UBERON:0001008!5.52e-07!45;UBERON:0009856!6.76e-07!26;UBERON:0005172!8.05e-07!55;UBERON:0005173!8.05e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;6.62e-12;34!UBERON:0002224;6.62e-12;34!UBERON:0002048;4.92e-11;22!UBERON:0000117;4.92e-11;22!UBERON:0000171;4.92e-11;22!UBERON:0000170;4.92e-11;22!UBERON:0005181;7.60e-11;35!UBERON:0004921;5.12e-10;33!UBERON:0000974;8.05e-10;6!UBERON:0002365;3.20e-09;31!UBERON:0002330;3.20e-09;31!UBERON:0000065;2.43e-08;44!UBERON:0005911;2.74e-08;36!UBERON:0005409;7.64e-08;22!UBERON:0004807;9.51e-08;22!UBERON:0000915;1.14e-07;52!UBERON:0004802;1.29e-07;19!UBERON:0000115;1.29e-07;19!UBERON:0001004;1.82e-07;65!UBERON:0001555;1.98e-07;54!UBERON:0000160;4.46e-07;17!UBERON:0001007;5.47e-07;81!UBERON:0000344;5.67e-07;20!UBERON:0003343;9.46e-07;4!UBERON:0004785;9.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.41e-24,160;UBERON:0000925,4.41e-24,160;UBERON:0006595,4.41e-24,160;UBERON:0001007,1.78e-22,145;UBERON:0001555,1.78e-22,145;UBERON:0007026,1.78e-22,145;UBERON:0004921,1.07e-20,118;UBERON:0001041,3.35e-14,87;UBERON:0005911,3.52e-14,82;UBERON:0001004,6.05e-14,74;UBERON:0005178,7.86e-14,34;UBERON:0002224,7.86e-14,34;UBERON:0005177,1.06e-13,101;UBERON:0005181,2.76e-13,35;UBERON:0000915,5.53e-12,52;UBERON:0009569,1.32e-11,112;UBERON:0002048,3.41e-11,22;UBERON:0000117,3.41e-11,22;UBERON:0000171,3.41e-11,22;UBERON:0000170,3.41e-11,22;UBERON:0005597,3.41e-11,22;UBERON:0000118,3.41e-11,22;UBERON:0008947,1.82e-10,38;UBERON:0003258,1.82e-10,38;UBERON:0005153,5.35e-10,37;UBERON:0000065,8.82e-10,54;UBERON:0002365,1.51e-09,31;UBERON:0002330,1.51e-09,31;UBERON:0005157,6.33e-09,47;UBERON:0011216,1.59e-08,223;UBERON:0004802,8.77e-08,19;UBERON:0000115,8.77e-08,19;UBERON:0000160,2.25e-07,17;UBERON:0002530,2.44e-07,59;UBERON:0001048,4.71e-07,160;UBERON:0000344,5.83e-07,20;UBERON:0005409,6.90e-07,25;UBERON:0003343,7.48e-07,4;UBERON:0004785,7.48e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,2.58124135850103,0.121973706129595,0.397589304964456,0.813357600086629,0.829288440122964,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,1.96565443335525,1.77236972004421,0,7.99424850530238,0,0.768251997860379,0,0.603173834469785,1.20364978706088,0,0,0,0,0,0,0,0,2.37061319387782,2.57545848628462,0,0,0,0,1.84780341018745,1.70130116690864,0.985143749731331,0.871901815541886,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,6.16383192917273,0.601519410909855,1.93370076765382,0,0,0,2.25599806453706,0.616122696835318,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0,0,2.26690225624989,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,1.81813406897076,1.72971060628596,0.893288987462089,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25088746543166,1.34060455107157,2.17781969722645,2.7301702225266,1.29151611801369,0,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,1.19372242368845,1.18785872333055,0.921482106297696,0,0,0,0,0.422250816255987,0.19924798825107,0.552567831062295,5.2905877049398,0,0,0,0.898683511473268,1.79021174675609,0,0,0,0,0,0,0,2.08342208868187,2.27395999990109,0,1.0241410345695,2.2882828526349,1.89110145414349,0,0,0,0,0.120596438625408,0,0,0,0,0,2.23077990845765,0.153900517007594,0,2.07507513949254,2.2439411102443,0.869178975376065,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,4.09923907158428,0,0,1.94606641907346,3.05515072466813,0,0,0,0.067401132980677,0,0,0,1.76098157038881,0,1.97292201424695,2.41981432097328,0,0,2.25485129121739,0.518440956986236,0,0,0,0,3.13070500632772,0,1.21491816834592,1.17590876897253,0.34823682632161,0.873633341210151,0,0.0967563312890851,0.219267951258557,0,0.775912131907355,0,0.225980740780532,0,0,0,0.977756913674015,0.480952921509202,1.06726497369676,0,2.59362750877391,0,0.857974989309823,0.432164393964449,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,4.65983798109815,0.945398187686684,1.07140615895516,0.876246070104404,0.393709926058995,0,0,0,1.44677833618517,1.2378549293751,1.24632101408756,0,0,0,1.34173875039706,2.52178263357434,4.14391246266485,0,0,5.18171032762502,0,0,0,0,0,0,0,0,0,0,3.07759690723973,2.65013777824443,0,0,0.171086837884329,2.11444506695002,1.60181118851542,2.35806457649499,2.07119527673598,0,0,0,0.638341257770182,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,2.74705760366215,0,0,0,0,0,1.258915569475,0.622077260032973,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0.161475645631851,0,1.86480665151949,1.29766695682514,1.65085738669511,1.27078232765372,0,0,0,0.300841313397029,0,7.03362610109783,1.57144016688853,0,0.295712172434091,0,0,0,0,0,1.64477330057155,0.496211178389294,0,2.04419884223352,0,0,1.82089681270989,0.682986574053893,0.354809480650555,0,0,0,0,0.236387681767936,0.667388411352415,0.863424021355654,0,1.96190514319652,1.82631744101899,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.3414369541879,2.07377898544228,1.29068207646083,0,0,0,2.2910686854405,0,0,6.26390418067637,0.883352102537187,2.56027642462766,0,0,0,0.485710993059139,4.67878926924211,1.19370465096821,0,2.37186772281816,0,5.1327366812669,2.70109553377806,6.1196676941108,2.35158648180761,0,4.00650130072764,0,0,0,0,0,0,0,1.07132363163395,5.64631794745107,1.84555143385087,2.19100916473955,3.21110498383179,0,0,0.0679914901909147,0,4.7612415646386,0,0,0,0,0,0,0.61193297845189,0.801652215796681,1.65410819162721,0.50141507858475,0.151557396436479,0,0,0,1.0661699095049,4.99935306073855,0.387533459016037,0.31037357147929,0,14.1933162960308,8.08468755832877,0,0,0.471464371102113,1.14755528628282,1.33064142618405,1.13964576055364,0,0,0,4.69281884806909,0.244482888365733,0.406896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| ||
|short_description=p3@MARVELD2 | |||
}} | }} |
Latest revision as of 13:10, 18 September 2015
Short description: | p3@MARVELD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MARVELD2_5end |
Coexpression cluster: | C3586_serous_breast_choriocarcinoma_pancreatic_malignant_Prostate_maxillary |
Association with transcript: | 20bp_to_ENST00000515844_5end |
EntrezGene: | MARVELD2 |
HGNC: | 26401 |
UniProt: | D6RAH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.94e-24 | 58 |
endo-epithelial cell | 1.34e-21 | 42 |
epithelial cell | 3.03e-17 | 253 |
epithelial cell of alimentary canal | 1.96e-10 | 20 |
respiratory epithelial cell | 4.32e-09 | 13 |
epithelial cell of lung | 8.77e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.31e-15 | 106 |
cell type cancer | 1.33e-10 | 143 |
squamous cell carcinoma | 3.14e-10 | 14 |
adenocarcinoma | 1.32e-08 | 25 |
thoracic cancer | 3.66e-08 | 4 |
breast cancer | 3.66e-08 | 4 |
respiratory system cancer | 7.69e-08 | 16 |
lung cancer | 7.32e-07 | 15 |