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MCL coexpression mm9:47: Difference between revisions

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{{MCL_coexpression_mm9
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perception of sound;0.000111558769478094;13409,18998,381375,18994,140476,237523!GO:0050954;sensory perception of mechanical stimulus;0.000111558769478094;13409,18998,381375,18994,140476,237523!GO:0030020;extracellular matrix structural constituent conferring tensile strength;0.000282455495859378;12824,12839,12815,12840!GO:0005581;collagen;0.000460912545842543;12824,12839,12815,12840!GO:0007601;visual perception;0.00173988770922795;667663,229320,238021,329421!GO:0050953;sensory perception of light stimulus;0.00173988770922795;667663,229320,238021,329421!GO:0005201;extracellular matrix structural constituent;0.00232220063058957;12824,12839,12815,12840!GO:0006817;phosphate transport;0.00314529728235581;12824,12839,12815,12840!GO:0048839;inner ear development;0.00318314421016452;18998,18994,14179,237523!GO:0015698;inorganic anion transport;0.00318314421016452;12824,80979,12839,12815,12840!GO:0043583;ear development;0.00375428422873133;18998,18994,14179,237523!GO:0006820;anion transport;0.00593351382064992;12824,80979,12839,12815,12840!GO:0044420;extracellular matrix part;0.00650230692455074;12824,12839,12815,12840!GO:0005578;proteinaceous extracellular matrix;0.00650230692455074;12824,12839,279028,12815,18256,12840!GO:0006811;ion transport;0.00650230692455074;12824,80979,12839,242151,16440,12815,231252,12840!GO:0015629;actin cytoskeleton;0.00835018827553175;667663,654462,238021,329421,56226!GO:0001502;cartilage condensation;0.0123406792412956;12824,57329!GO:0048856;anatomical structure development;0.013837056760788;12824,80979,237523,238021,14087,18998,76365,18994,57329,16011,14179,12840,18016,233752!GO:0042472;inner ear morphogenesis;0.0158235648392205;18998,14179,237523!GO:0051017;actin filament bundle formation;0.0180787076473885;238021,56226!GO:0042471;ear morphogenesis;0.0195055710453474;18998,14179,237523!GO:0005509;calcium ion binding;0.0489527526613866;16440,279028,106565,18261,18256,29866,241073!GO:0007423;sensory organ development;0.0493966122629904;18998,18994,14179,237523!GO:0050877;neurological system process;0.0493966122629904;13409,381375,229320,140476,237523,238021,329421,18998,667663,18994,231252!GO:0048598;embryonic morphogenesis;0.0493966122629904;18998,76365,14179,237523!GO:0021846;cell proliferation in forebrain;0.0493966122629904;14179!GO:0051494;negative regulation of cytoskeleton organization and biogenesis;0.0493966122629904;56226!GO:0060091;kinocilium;0.0493966122629904;654462!GO:0030704;vitelline membrane formation;0.0493966122629904;327956!GO:0032437;cuticular plate;0.0493966122629904;654462!GO:0008316;structural constituent of vitelline membrane;0.0493966122629904;327956!GO:0016942;insulin-like growth factor binding protein complex;0.0493966122629904;16011!GO:0051639;actin filament network 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|coexpression_dpi_cluster_scores_median=1.01235768160147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70624476444742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=GO:0007605;sensory perception of sound;0.000111558769478094;13409,18998,381375,18994,140476,237523!GO:0050954;sensory perception of mechanical stimulus;0.000111558769478094;13409,18998,381375,18994,140476,237523!GO:0030020;extracellular matrix structural constituent conferring tensile strength;0.000282455495859378;12824,12839,12815,12840!GO:0005581;collagen;0.000460912545842543;12824,12839,12815,12840!GO:0007601;visual perception;0.00173988770922795;667663,229320,238021,329421!GO:0050953;sensory perception of light stimulus;0.00173988770922795;667663,229320,238021,329421!GO:0005201;extracellular matrix structural constituent;0.00232220063058957;12824,12839,12815,12840!GO:0006817;phosphate transport;0.00314529728235581;12824,12839,12815,12840!GO:0048839;inner ear development;0.00318314421016452;18998,18994,14179,237523!GO:0015698;inorganic anion transport;0.00318314421016452;12824,80979,12839,12815,12840!GO:0043583;ear development;0.00375428422873133;18998,18994,14179,237523!GO:0006820;anion transport;0.00593351382064992;12824,80979,12839,12815,12840!GO:0044420;extracellular matrix part;0.00650230692455074;12824,12839,12815,12840!GO:0005578;proteinaceous extracellular matrix;0.00650230692455074;12824,12839,279028,12815,18256,12840!GO:0006811;ion transport;0.00650230692455074;12824,80979,12839,242151,16440,12815,231252,12840!GO:0015629;actin cytoskeleton;0.00835018827553175;667663,654462,238021,329421,56226!GO:0001502;cartilage condensation;0.0123406792412956;12824,57329!GO:0048856;anatomical structure development;0.013837056760788;12824,80979,237523,238021,14087,18998,76365,18994,57329,16011,14179,12840,18016,233752!GO:0042472;inner ear morphogenesis;0.0158235648392205;18998,14179,237523!GO:0051017;actin filament bundle formation;0.0180787076473885;238021,56226!GO:0042471;ear morphogenesis;0.0195055710453474;18998,14179,237523!GO:0005509;calcium ion binding;0.0489527526613866;16440,279028,106565,18261,18256,29866,241073!GO:0007423;sensory organ development;0.0493966122629904;18998,18994,14179,237523!GO:0050877;neurological system process;0.0493966122629904;13409,381375,229320,140476,237523,238021,329421,18998,667663,18994,231252!GO:0048598;embryonic morphogenesis;0.0493966122629904;18998,76365,14179,237523!GO:0021846;cell proliferation in forebrain;0.0493966122629904;14179!GO:0051494;negative regulation of cytoskeleton organization and biogenesis;0.0493966122629904;56226!GO:0060091;kinocilium;0.0493966122629904;654462!GO:0030704;vitelline membrane formation;0.0493966122629904;327956!GO:0032437;cuticular plate;0.0493966122629904;654462!GO:0008316;structural constituent of vitelline membrane;0.0493966122629904;327956!GO:0016942;insulin-like growth factor binding protein complex;0.0493966122629904;16011!GO:0051639;actin filament network formation;0.0493966122629904;56226!
|ontology_enrichment_celltype=CL:0000197!1.87e-86!2;CL:0002491!1.87e-86!2;CL:0000098!1.87e-86!2;CL:0000006!2.74e-44!1;CL:0002374!2.74e-44!1;CL:0000202!2.74e-44!1;CL:0000199!2.74e-44!1;CL:0000855!2.74e-44!1;CL:0000589!2.74e-44!1;CL:0000710!7.47e-44!1;CL:0002077!7.47e-44!1;CL:0005014!7.47e-44!1;CL:0002315!7.47e-44!1;CL:0002490!7.47e-44!1;CL:0000630!1.12e-15!3;CL:0000066!3.41e-08!25;CL:0000075!1.64e-07!7
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004766!1.87e-86!2;UBERON:0008193!1.87e-86!2;UBERON:0005913!1.87e-86!2;UBERON:0011158!1.87e-86!2;UBERON:0005744!1.87e-86!2;UBERON:0003457!1.87e-86!2;UBERON:0008001!1.87e-86!2;UBERON:0007497!1.87e-86!2;UBERON:0009955!1.87e-86!2;UBERON:0003067!1.87e-86!2;UBERON:0002546!1.87e-86!2;UBERON:0007914!1.87e-86!2;UBERON:0005253!1.87e-86!2;UBERON:0002227!1.87e-86!2;UBERON:0001846!1.87e-86!2;UBERON:0004339!1.87e-86!2;UBERON:0002105!1.87e-86!2;UBERON:0001678!1.87e-86!2;UBERON:0003128!1.87e-86!2;UBERON:0001694!1.87e-86!2;UBERON:0004681!1.87e-86!2;UBERON:0001839!1.87e-86!2;UBERON:0001690!1.87e-86!2;UBERON:0001844!1.87e-86!2;UBERON:0001849!1.87e-86!2;UBERON:0002499!1.87e-86!2;UBERON:0001855!1.87e-86!2;UBERON:0011137!1.87e-86!2;UBERON:0001703!1.87e-86!2;UBERON:0010323!1.87e-86!2;UBERON:0003129!1.87e-86!2;UBERON:0003069!1.87e-86!2;UBERON:0003051!1.87e-86!2;UBERON:0004637!1.87e-86!2;UBERON:0004761!1.87e-86!2;UBERON:0010113!1.87e-86!2;UBERON:0009123!1.87e-86!2;UBERON:0010351!1.87e-86!2;UBERON:0009617!1.87e-86!2;UBERON:0005641!1.87e-86!2;UBERON:0010349!1.87e-86!2;UBERON:0000075!6.66e-30!6;UBERON:0005856!6.66e-30!6;UBERON:0005866!6.66e-30!6;UBERON:0005863!6.66e-30!6;UBERON:0000058!7.57e-26!7;UBERON:0000485!5.67e-17!11;UBERON:0007524!5.67e-17!11;UBERON:0003077!5.67e-17!11;UBERON:0007285!5.67e-17!11;UBERON:0000020!1.13e-15!12;UBERON:0001032!1.13e-15!12;UBERON:0004456!1.13e-15!12;UBERON:0000033!1.42e-14!13;UBERON:0005085!1.42e-14!13;UBERON:0001474!3.83e-09!22;UBERON:0004765!3.83e-09!22;UBERON:0001434!3.83e-09!22
|tfbs_overrepresentation_for_novel_motifs=0.324431,0.645401,0.0523125,0.0922175,2.06057,0.171683,0.137115,2.93487,0.392505,0.0614744,0.428122,0.0100492,0.0475018,0.0165241,0.123644,0,0.122667,2.06715,0.060347,0.756236,0.143388,0.922078,0.00693838,0.423629,0.610484,0.737159,1.676,0.165271,0.888658,0.217423,0.0884607,0.644771,0.0113509,1.66746,1.12911e-05,1.55011,2.83565e-06,0.0386371,1.08314,0.0931198,0.40405,0.205331,1.16934,1.38007,0.559877,0.00365552,0.248191,0.286118,1.13051,0.247617,0.102631,0.0200778,1.64467,0.111489,0.125677,0.114297,0.894891,0.0166546,0.242132,0.0182222,0.0677099,0.00329988,0.441351,0.0909048,0.00389285,0.137465,0.809561,0.456287,0.238038,0.28375,0.0760394,0.748071,2.54573e-08,0.155846,0.00051761,0.0628698,1.05931,0.32861,0.347789,0.747898,1.33821,0.0762065,0.323646,0.172059,0.00367356,1.80165e-12,0.0199625,0.000140822,0.00262938,1.26656,0.660856,0.00389396,0.481658,0.906272,0.000295987,0.853037,0.125548,0.185723,0.674169,0.590714,0.513672,0.164135,0.856049,0.589736,0.00699754,0.00183546,0.00410536,1.27392,0.00219099,0.00343736,0.291962,0.0996368,0.434467,0.0454873,0.380693,0.873201,0.00719714,0.144924,0.332017,0.171596,0.0603124,0.0341761,0.445429,0.614233,0.467838,0.124083,0.225778,0.00988157,0.0264816,0.511606,1.42613,0.314208,0.233119,0.0842849,1.12107,0.294107,0.836365,0.0991023,0.146423,0.519936,0.223605,1.19464,0.49725,0.930687,0.168172,0.0204047,0.373284,0.487117,1.01272,0.00669354,0.110591,1.1395e-11,0.929398,0.109284,0.083179,0.612404,0.302154,0.164391,0.2388,0.046445,0.15358,0.15257,0.980824,0.456735,0.162889,0.188388,0.591013,0.340671,0.0143801
}}

Latest revision as of 14:35, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:106984145..106984149,-p@chr10:106984145..106984149
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Mm9::chr10:107156949..107156956,-p3@Ptprq
Mm9::chr10:107156963..107157013,-p1@Ptprq
Mm9::chr10:107157034..107157045,-p2@Ptprq
Mm9::chr10:108128195..108128205,-p@chr10:108128195..108128205
-
Mm9::chr10:18245743..18245760,+p@chr10:18245743..18245760
+
Mm9::chr10:18246142..18246145,+p@chr10:18246142..18246145
+
Mm9::chr10:53118509..53118534,-p@chr10:53118509..53118534
-
Mm9::chr10:67371967..67371993,+p@chr10:67371967..67371993
+
Mm9::chr10:67371994..67372010,+p@chr10:67371994..67372010
+
Mm9::chr10:80806020..80806031,-p3@Gipc3
Mm9::chr10:80806047..80806059,-p4@Gipc3
Mm9::chr10:81091315..81091346,+p3@Ankrd24
Mm9::chr10:81091447..81091464,+p9@Ankrd24
Mm9::chr11:102123535..102123544,+p5@BC030867
Mm9::chr11:102123554..102123566,+p4@BC030867
Mm9::chr11:114603036..114603048,+p@chr11:114603036..114603048
+
Mm9::chr11:114626677..114626752,+p1@Kif19a
Mm9::chr11:114626758..114626770,+p2@Kif19a
Mm9::chr11:114652018..114652020,+p@chr11:114652018..114652020
+
Mm9::chr11:11599532..11599539,-p@chr11:11599532..11599539
-
Mm9::chr11:120222470..120222516,+p2@Fscn2
Mm9::chr11:120412530..120412539,-p3@Ppp1r27
Mm9::chr11:4689737..4689763,-p@chr11:4689737..4689763
-
Mm9::chr11:4689776..4689785,-p@chr11:4689776..4689785
-
Mm9::chr11:4689795..4689816,-p@chr11:4689795..4689816
-
Mm9::chr11:4689818..4689831,-p@chr11:4689818..4689831
-
Mm9::chr11:4689837..4689845,-p@chr11:4689837..4689845
-
Mm9::chr11:5876195..5876219,-p@chr11:5876195..5876219
-
Mm9::chr11:70328110..70328118,-p1@Vmo1
Mm9::chr11:75421384..75421397,+p@chr11:75421384..75421397
+
Mm9::chr11:89702580..89702593,-p@chr11:89702580..89702593
-
Mm9::chr11:94371110..94371111,-p@chr11:94371110..94371111
-
Mm9::chr11:94371127..94371139,-p@chr11:94371127..94371139
-
Mm9::chr12:109905399..109905416,+p@chr12:109905399..109905416
+
Mm9::chr12:109905468..109905474,+p@chr12:109905468..109905474
+
Mm9::chr12:13508015..13508019,+p@chr12:13508015..13508019
+
Mm9::chr12:13508046..13508055,+p@chr12:13508046..13508055
+
Mm9::chr12:13572961..13572974,+p@chr12:13572961..13572974
+
Mm9::chr13:100200772..100200781,-p@chr13:100200772..100200781
-
Mm9::chr13:31171742..31171745,-p@chr13:31171742..31171745
-
Mm9::chr13:31877092..31877101,+p@chr13:31877092..31877101
+
Mm9::chr13:31877112..31877122,+p@chr13:31877112..31877122
+
Mm9::chr13:37195838..37195870,-p@chr13:37195838..37195870
-
Mm9::chr13:43699188..43699216,+p@chr13:43699188..43699216
+
Mm9::chr13:43699228..43699239,+p@chr13:43699228..43699239
+
Mm9::chr13:46832255..46832294,-p@chr13:46832255..46832294
-
Mm9::chr13:58283583..58283607,-p@chr13:58283583..58283607
-
Mm9::chr13:59741514..59741533,-p@chr13:59741514..59741533
-
Mm9::chr13:59741540..59741550,-p@chr13:59741540..59741550
-
Mm9::chr13:78257454..78257465,+p@chr13:78257454..78257465
+
Mm9::chr13:78257491..78257498,+p@chr13:78257491..78257498
+
Mm9::chr13:78257518..78257522,+p@chr13:78257518..78257522
+
Mm9::chr14:102309977..102310020,+p@chr14:102309977..102310020
+
Mm9::chr14:123275658..123275687,+p@chr14:123275658..123275687
+
Mm9::chr14:123275688..123275702,+p@chr14:123275688..123275702
+
Mm9::chr14:20649897..20649907,+p@chr14:20649897..20649907
+
Mm9::chr14:31283058..31283069,-p@chr14:31283058..31283069
-
Mm9::chr14:31283072..31283081,-p@chr14:31283072..31283081
-
Mm9::chr14:31283085..31283097,-p@chr14:31283085..31283097
-
Mm9::chr14:47293487..47293493,-p@chr14:47293487..47293493
-
Mm9::chr14:47293496..47293510,-p@chr14:47293496..47293510
-
Mm9::chr14:63099970..63099980,-p@chr14:63099970..63099980
-
Mm9::chr15:103146966..103146971,-p@chr15:103146966..103146971
-
Mm9::chr15:12848147..12848162,+p@chr15:12848147..12848162
+
Mm9::chr15:41434861..41434874,+p@chr15:41434861..41434874
+
Mm9::chr15:58480061..58480066,+p5@Fer1l6
Mm9::chr15:58480071..58480094,+p2@Fer1l6
Mm9::chr15:65641741..65641748,+p@chr15:65641741..65641748
+
Mm9::chr15:65641779..65641790,+p@chr15:65641779..65641790
+
Mm9::chr15:65743847..65743854,-p1@Oc90
Mm9::chr15:75398081..75398130,-p12@Ly6h
Mm9::chr15:78817557..78817567,+p@chr15:78817557..78817567
+
Mm9::chr15:85334335..85334353,+p@chr15:85334335..85334353
+
Mm9::chr15:89215306..89215315,+p@chr15:89215306..89215315
+
Mm9::chr15:89215319..89215330,+p@chr15:89215319..89215330
+
Mm9::chr15:89215333..89215341,+p@chr15:89215333..89215341
+
Mm9::chr15:91379135..91379143,-p@chr15:91379135..91379143
-
Mm9::chr15:97806034..97806061,+p@chr15:97806034..97806061
+
Mm9::chr15:97828021..97828028,-p@chr15:97828021..97828028
-
Mm9::chr15:97835097..97835113,-p2@Col2a1
Mm9::chr16:11633264..11633270,-p@chr16:11633264..11633270
-
Mm9::chr16:45693840..45693856,-p1@Tmprss7
Mm9::chr16:55283394..55283400,-p1@Zpld1
Mm9::chr16:93971325..93971337,-p@chr16:93971325..93971337
-
Mm9::chr16:93971357..93971363,-p@chr16:93971357..93971363
-
Mm9::chr16:93971367..93971379,-p@chr16:93971367..93971379
-
Mm9::chr16:96494788..96494801,+p12@B3galt5
Mm9::chr17:13983095..13983100,+p@chr17:13983095..13983100
+
Mm9::chr17:13983102..13983126,+p@chr17:13983102..13983126
+
Mm9::chr17:13983160..13983167,+p@chr17:13983160..13983167
+
Mm9::chr17:13983179..13983190,+p@chr17:13983179..13983190
+
Mm9::chr17:13983198..13983203,+p@chr17:13983198..13983203
+
Mm9::chr17:15466888..15466898,-p@chr17:15466888..15466898
-
Mm9::chr17:26497311..26497361,+p@chr17:26497311..26497361
+
Mm9::chr17:27252925..27252939,+p@chr17:27252925..27252939
+
Mm9::chr17:28712670..28712688,+p2@Lhfpl5
Mm9::chr17:28712697..28712717,+p1@Lhfpl5
Mm9::chr17:28712726..28712748,+p3@Lhfpl5
Mm9::chr17:31335869..31335899,-p1@Tmprss3
Mm9::chr17:31335903..31335921,-p2@Tmprss3
Mm9::chr17:34185343..34185356,+p7@Col11a2
Mm9::chr17:34185362..34185370,+p10@Col11a2
Mm9::chr17:34185378..34185383,+p11@Col11a2
Mm9::chr17:34185389..34185401,+p8@Col11a2
Mm9::chr17:46401882..46401902,-p@chr17:46401882..46401902
-
Mm9::chr17:46434866..46434887,+p2@Dlk2
Mm9::chr17:47056797..47056806,+p@chr17:47056797..47056806
+
Mm9::chr17:47827841..47827846,-p3@Prickle4
Mm9::chr17:73260867..73260877,+p@chr17:73260867..73260877
+
Mm9::chr18:38104702..38104718,-p@chr18:38104702..38104718
-
Mm9::chr18:42158627..42158630,-p@chr18:42158627..42158630
-
Mm9::chr18:42158697..42158709,-p1@Grxcr2
Mm9::chr18:42554021..42554024,+p2@Pou4f3
Mm9::chr18:42554126..42554135,+p3@Pou4f3
Mm9::chr18:42554216..42554229,+p1@Pou4f3
Mm9::chr18:42558036..42558040,+p@chr18:42558036..42558040
+
Mm9::chr18:59221998..59222030,+p2@A730017C20Rik
Mm9::chr18:59222033..59222043,+p7@A730017C20Rik
Mm9::chr18:65857981..65857990,+p@chr18:65857981..65857990
+
Mm9::chr18:66033513..66033517,-p@chr18:66033513..66033517
-
Mm9::chr18:66033526..66033539,-p@chr18:66033526..66033539
-
Mm9::chr18:77520395..77520403,+p2@Loxhd1
Mm9::chr18:77520415..77520435,+p1@Loxhd1
Mm9::chr18:81314626..81314636,+p@chr18:81314626..81314636
+
Mm9::chr18:81327205..81327211,+p@chr18:81327205..81327211
+
Mm9::chr19:10535924..10535927,-p@chr19:10535924..10535927
-
Mm9::chr19:10536767..10536777,-p@chr19:10536767..10536777
-
Mm9::chr19:10536797..10536802,-p@chr19:10536797..10536802
-
Mm9::chr19:21028739..21028785,-p1@Tmc1
Mm9::chr19:23979067..23979073,+p8@Apba1
Mm9::chr19:23979079..23979122,+p3@Apba1
Mm9::chr19:4081565..4081583,+p4@Cabp2
Mm9::chr19:4140290..4140321,+p2@Gpr152
Mm9::chr19:45817346..45817353,-p2@Fgf8
Mm9::chr19:45817372..45817389,-p1@Fgf8
Mm9::chr1:16651613..16651626,+p@chr1:16651613..16651626
+
Mm9::chr1:16651649..16651655,+p@chr1:16651649..16651655
+
Mm9::chr1:169238978..169238989,+p3@Tmco1
Mm9::chr1:172837125..172837129,-p@chr1:172837125..172837129
-
Mm9::chr1:172843796..172843799,-p@chr1:172843796..172843799
-
Mm9::chr1:172843813..172843834,-p@chr1:172843813..172843834
-
Mm9::chr1:172843847..172843880,-p@chr1:172843847..172843880
-
Mm9::chr1:172843885..172843890,-p@chr1:172843885..172843890
-
Mm9::chr1:182528371..182528385,+p@chr1:182528371..182528385
+
Mm9::chr1:182528388..182528403,+p@chr1:182528388..182528403
+
Mm9::chr1:194818647..194818660,-p@chr1:194818647..194818660
-
Mm9::chr1:24202035..24202060,+p3@Col9a1
Mm9::chr1:24202069..24202110,+p1@Col9a1
Mm9::chr1:24217213..24217226,+p@chr1:24217213..24217226
+
Mm9::chr1:60561636..60561645,-p@chr1:60561636..60561645
-
Mm9::chr1:63733478..63733491,-p1@Dytn
Mm9::chr1:72908235..72908246,-p@chr1:72908235..72908246
-
Mm9::chr1:78523144..78523177,+p@chr1:78523144..78523177
+
Mm9::chr1:93218682..93218691,+p2@Espnl
Mm9::chr1:93218694..93218705,+p1@Espnl
Mm9::chr1:93235228..93235249,+p@chr1:93235228..93235249
+
Mm9::chr1:93235253..93235264,+p@chr1:93235253..93235264
+
Mm9::chr1:94613743..94613758,-p@chr1:94613743..94613758
-
Mm9::chr1:94627290..94627299,-p@chr1:94627290..94627299
-
Mm9::chr2:101978127..101978141,-p2@Ldlrad3
Mm9::chr2:113205684..113205696,+p@chr2:113205684..113205696
+
Mm9::chr2:12032746..12032751,-p@chr2:12032746..12032751
-
Mm9::chr2:121206667..121206674,-p2@Strc
Mm9::chr2:121206677..121206683,-p3@Strc
Mm9::chr2:121206695..121206711,-p1@Strc
Mm9::chr2:128881546..128881553,-p@chr2:128881546..128881553
-
Mm9::chr2:142904203..142904218,+p1@Otor
Mm9::chr2:142906965..142906982,-p@chr2:142906965..142906982
-
Mm9::chr2:142907424..142907448,-p@chr2:142907424..142907448
-
Mm9::chr2:14685072..14685084,+p41@Cacnb2
Mm9::chr2:152453066..152453075,-p@chr2:152453066..152453075
-
Mm9::chr2:153744127..153744132,+p1@Bpifb3
Mm9::chr2:170417150..170417155,-p@chr2:170417150..170417155
-
Mm9::chr2:180335744..180335746,+p@chr2:180335744..180335746
+
Mm9::chr2:22149167..22149209,+p1@Myo3a
Mm9::chr2:26862112..26862124,+p3@Adamts13
Mm9::chr2:29935952..29935993,+p7@Pkn3
Mm9::chr2:3253431..3253446,+p1@Acbd7
Mm9::chr2:53464168..53464175,+p@chr2:53464168..53464175
+
Mm9::chr2:53464178..53464186,+p@chr2:53464178..53464186
+
Mm9::chr2:53464193..53464197,+p@chr2:53464193..53464197
+
Mm9::chr2:67011921..67011934,+p2@Gm1322
Mm9::chr2:67011941..67011951,+p3@Gm1322
Mm9::chr2:67011956..67011967,+p1@Gm1322
Mm9::chr2:69877324..69877363,+p1@Myo3b
Mm9::chr2:73232344..73232356,-p@chr2:73232344..73232356
-
Mm9::chr2:75320183..75320189,+p@chr2:75320183..75320189
+
Mm9::chr2:76488321..76488335,+p2@Dfnb59
Mm9::chr3:100724698..100724706,+p@chr3:100724698..100724706
+
Mm9::chr3:106986057..106986062,+p1@Kcna10
Mm9::chr3:127520184..127520191,-p@chr3:127520184..127520191
-
Mm9::chr3:154459184..154459195,+p@chr3:154459184..154459195
+
Mm9::chr3:154459231..154459240,+p@chr3:154459231..154459240
+
Mm9::chr3:154459246..154459253,+p@chr3:154459246..154459253
+
Mm9::chr3:154693281..154693317,-p@chr3:154693281..154693317
-
Mm9::chr3:24757147..24757158,-p@chr3:24757147..24757158
-
Mm9::chr3:40614040..40614055,+p@chr3:40614040..40614055
+
Mm9::chr3:58626291..58626298,-p@chr3:58626291..58626298
-
Mm9::chr3:58689242..58689276,-p1@Clrn1
Mm9::chr3:87882217..87882250,-p2@Ttc24
Mm9::chr4:106770202..106770208,+p@chr4:106770202..106770208
+
Mm9::chr4:115556939..115556945,+p4@Kncn
Mm9::chr4:115556972..115556979,+p3@Kncn
Mm9::chr4:115556989..115556997,+p1@Kncn
Mm9::chr4:120712286..120712302,+p4@Col9a2
Mm9::chr4:130461150..130461185,+p@chr4:130461150..130461185
+
Mm9::chr4:132776773..132776821,+p1@Cd164l2
Mm9::chr4:132776826..132776842,+p2@Cd164l2
Mm9::chr4:133802857..133802884,+p@chr4:133802857..133802884
+
Mm9::chr4:151505798..151505818,-p21@Espn
Mm9::chr4:151505856..151505872,-p@chr4:151505856..151505872
-
Mm9::chr4:151505896..151505910,-p9@Espn
Mm9::chr4:154208086..154208123,+p@chr4:154208086..154208123
+
Mm9::chr4:63079735..63079745,-p@chr4:63079735..63079745
-
Mm9::chr4:69913184..69913198,-p@chr4:69913184..69913198
-
Mm9::chr4:69913202..69913213,-p@chr4:69913202..69913213
-
Mm9::chr5:123958485..123958500,+p2@ENSMUST00000134552
Mm9::chr5:144115382..144115389,+p@chr5:144115382..144115389
+
Mm9::chr5:144787465..144787476,-p2@Ocm
Mm9::chr5:147854240..147854249,-p@chr5:147854240..147854249
-
Mm9::chr5:150945209..150945220,+p@chr5:150945209..150945220
+
Mm9::chr5:21371424..21371435,-p2@Slc26a5
Mm9::chr5:28035962..28035983,+p@chr5:28035962..28035983
+
Mm9::chr5:30710403..30710406,-p10@Otof
Mm9::chr5:30710416..30710440,-p2@Otof
Mm9::chr5:30710455..30710464,-p9@Otof
Mm9::chr5:30764282..30764315,-p1@Otof
Mm9::chr5:3909290..3909299,+p@chr5:3909290..3909299
+
Mm9::chr5:3909310..3909321,+p@chr5:3909310..3909321
+
Mm9::chr5:66358585..66358620,+p3@Chrna9
Mm9::chr5:66358623..66358640,+p2@Chrna9
Mm9::chr5:68423014..68423037,+p1@Grxcr1
Mm9::chr5:72652660..72652667,+p@chr5:72652660..72652667
+
Mm9::chr5:72652671..72652676,+p@chr5:72652671..72652676
+
Mm9::chr6:113251570..113251578,+p@chr6:113251570..113251578
+
Mm9::chr6:113251606..113251613,+p@chr6:113251606..113251613
+
Mm9::chr6:113251614..113251623,+p@chr6:113251614..113251623
+
Mm9::chr6:113793475..113793487,-p@chr6:113793475..113793487
-
Mm9::chr6:29428397..29428407,-p@chr6:29428397..29428407
-
Mm9::chr6:30125733..30125736,-p@chr6:30125733..30125736
-
Mm9::chr6:36665421..36665431,-p5@uc009biz.1
Mm9::chr6:36665480..36665492,-p3@uc009biz.1
Mm9::chr6:36966723..36966734,-p@chr6:36966723..36966734
-
Mm9::chr6:36966993..36966996,-p@chr6:36966993..36966996
-
Mm9::chr6:64684505..64684512,+p@chr6:64684505..64684512
+
Mm9::chr6:64684637..64684654,+p@chr6:64684637..64684654
+
Mm9::chr6:64684692..64684697,+p@chr6:64684692..64684697
+
Mm9::chr6:83129695..83129696,+p24@Dctn1
Mm9::chr6:86745686..86745727,-p@chr6:86745686..86745727
-
Mm9::chr6:86746562..86746579,-p@chr6:86746562..86746579
-
Mm9::chr6:97203149..97203166,-p9@Lmod3
Mm9::chr7:105259941..105259955,-p@chr7:105259941..105259955
-
Mm9::chr7:105259962..105259971,-p@chr7:105259962..105259971
-
Mm9::chr7:105259972..105259986,-p@chr7:105259972..105259986
-
Mm9::chr7:109052262..109052291,-p1@Tomt
Mm9::chr7:109052297..109052300,-p2@Tomt
Mm9::chr7:109265219..109265233,-p3@Chrna10
Mm9::chr7:109265235..109265247,-p1@Chrna10
Mm9::chr7:109265257..109265269,-p2@Chrna10
Mm9::chr7:109265277..109265288,-p4@Chrna10
Mm9::chr7:121887229..121887247,+p4@Insc
Mm9::chr7:127344987..127345014,-p@chr7:127344987..127345014
-
Mm9::chr7:133957514..133957529,+p@chr7:133957514..133957529
+
Mm9::chr7:141605556..141605563,-p@chr7:141605556..141605563
-
Mm9::chr7:141711784..141711814,-p@chr7:141711784..141711814
-
Mm9::chr7:29541157..29541176,+p1@Gm6537
Mm9::chr7:88068153..88068160,-p10@Sec11a
Mm9::chr7:88634688..88634701,-p@chr7:88634688..88634701
-
Mm9::chr8:112563349..112563378,+p@chr8:112563349..112563378
+
Mm9::chr8:113605943..113605978,-p3@Clec18a
Mm9::chr8:125802236..125802251,-p3@Fanca
Mm9::chr8:13414266..13414279,+p@chr8:13414266..13414279
+
Mm9::chr8:13414289..13414295,+p@chr8:13414289..13414295
+
Mm9::chr8:13435134..13435159,+p2@Fam70b
Mm9::chr8:13435173..13435186,+p6@Fam70b
Mm9::chr8:13435598..13435609,+p5@Fam70b
Mm9::chr8:79834836..79834846,-p@chr8:79834836..79834846
-
Mm9::chr8:94283075..94283082,+p@chr8:94283075..94283082
+
Mm9::chr9:50968647..50968668,-p@chr9:50968647..50968668
-
Mm9::chr9:56208792..56208814,-p@chr9:56208792..56208814
-
Mm9::chr9:60688528..60688542,+p@chr9:60688528..60688542
+
Mm9::chr9:62996985..62996990,-p1@Skor1
Mm9::chr9:66860869..66860881,+p@chr9:66860869..66860881
+
Mm9::chr9:66860888..66860899,+p@chr9:66860888..66860899
+
Mm9::chr9:67665793..67665831,-p@chr9:67665793..67665831
-
Mm9::chr9:87599703..87599714,-p@chr9:87599703..87599714
-
Mm9::chr9:92087926..92087938,+p2@Plscr5
Mm9::chr9:92087939..92087956,+p1@Plscr5
Mm9::chr9:92087990..92087995,+p3@Plscr5
Mm9::chrX:108009798..108009815,+p3@Pou3f4
Mm9::chrX:140119592..140119616,+p@chrX:140119592..140119616
+
Mm9::chrX:140119620..140119628,+p@chrX:140119620..140119628
+
Mm9::chrX:154140723..154140759,+p@chrX:154140723..154140759
+
Mm9::chrX:154140764..154140773,+p@chrX:154140764..154140773
+
Mm9::chrX:154140781..154140788,+p@chrX:154140781..154140788
+
Mm9::chrX:154140800..154140810,+p@chrX:154140800..154140810
+
Mm9::chrX:154140819..154140846,+p@chrX:154140819..154140846
+
Mm9::chrX:154140881..154140896,+p@chrX:154140881..154140896
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0007605sensory perception of sound0.000111558769478094
GO:0050954sensory perception of mechanical stimulus0.000111558769478094
GO:0030020extracellular matrix structural constituent conferring tensile strength0.000282455495859378
GO:0005581collagen0.000460912545842543
GO:0007601visual perception0.00173988770922795
GO:0050953sensory perception of light stimulus0.00173988770922795
GO:0005201extracellular matrix structural constituent0.00232220063058957
GO:0006817phosphate transport0.00314529728235581
GO:0048839inner ear development0.00318314421016452
GO:0015698inorganic anion transport0.00318314421016452
GO:0043583ear development0.00375428422873133
GO:0006820anion transport0.00593351382064992
GO:0044420extracellular matrix part0.00650230692455074
GO:0005578proteinaceous extracellular matrix0.00650230692455074
GO:0006811ion transport0.00650230692455074
GO:0015629actin cytoskeleton0.00835018827553175
GO:0001502cartilage condensation0.0123406792412956
GO:0048856anatomical structure development0.013837056760788
GO:0042472inner ear morphogenesis0.0158235648392205
GO:0051017actin filament bundle formation0.0180787076473885
GO:0042471ear morphogenesis0.0195055710453474
GO:0005509calcium ion binding0.0489527526613866
GO:0007423sensory organ development0.0493966122629904
GO:0050877neurological system process0.0493966122629904
GO:0048598embryonic morphogenesis0.0493966122629904
GO:0021846cell proliferation in forebrain0.0493966122629904
GO:0051494negative regulation of cytoskeleton organization and biogenesis0.0493966122629904
GO:0060091kinocilium0.0493966122629904
GO:0030704vitelline membrane formation0.0493966122629904
GO:0032437cuticular plate0.0493966122629904
GO:0008316structural constituent of vitelline membrane0.0493966122629904
GO:0016942insulin-like growth factor binding protein complex0.0493966122629904
GO:0051639actin filament network formation0.0493966122629904



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
cranial bone1.87e-862
pneumatized bone1.87e-862
zone of bone organ1.87e-862
primary subdivision of skull1.87e-862
cranial conduit1.87e-862
head bone1.87e-862
irregular bone1.87e-862
developing epithelial placode1.87e-862
neurogenic placode1.87e-862
dorsolateral placode1.87e-862
cranial placode1.87e-862
head or neck bone1.87e-862
head mesenchyme1.87e-862
spiral organ of cochlea1.87e-862
internal ear1.87e-862
calvarium1.87e-862
vestibulo-auditory system1.87e-862
temporal bone1.87e-862
cranium1.87e-862
petrous part of temporal bone1.87e-862
vestibular system1.87e-862
bony labyrinth1.87e-862
ear1.87e-862
cochlea1.87e-862
membranous labyrinth1.87e-862
cochlear labyrinth1.87e-862
cochlear duct of membranous labyrinth1.87e-862
axial skeletal system1.87e-862
neurocranium1.87e-862
cranial skeletal system1.87e-862
skull1.87e-862
otic placode1.87e-862
ear vesicle1.87e-862
otic capsule1.87e-862
cartilaginous neurocranium1.87e-862
future membranous labyrinth1.87e-862
otic cup1.87e-862
otic capsule cartilage condensation1.87e-862
head paraxial mesoderm1.87e-862
otocyst epithelium1.87e-862
otic capsule pre-cartilage condensation1.87e-862
subdivision of skeletal system6.66e-306
developing mesenchymal condensation6.66e-306
pre-cartilage condensation6.66e-306
cartilaginous condensation6.66e-306
duct7.57e-267
simple columnar epithelium5.67e-1711
dense mesenchyme tissue5.67e-1711
paraxial mesoderm5.67e-1711
presumptive paraxial mesoderm5.67e-1711
sense organ1.13e-1512
sensory system1.13e-1512
entire sense organ system1.13e-1512
head1.42e-1413
ectodermal placode1.42e-1413
bone element3.83e-0922
skeletal element3.83e-0922
skeletal system3.83e-0922


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.12.02509e-15
MA0004.10.0107703
MA0006.10.000856333
MA0007.10.00719264
MA0009.10.34068
MA0014.15.24948e-08
MA0017.10.0163147
MA0019.10.801005
MA0024.10.00103828
MA0025.10.0910875
MA0027.10.96875
MA0028.16.86683e-08
MA0029.10.50998
MA0030.10.125194
MA0031.10.276624
MA0038.10.224482
MA0040.10.56049
MA0041.10.0675605
MA0042.10.147634
MA0043.10.373105
MA0046.10.0597407
MA0048.10.233006
MA0050.10.839525
MA0051.10.622147
MA0052.10.0520231
MA0055.10.873566
MA0056.10
MA0057.10.00105572
MA0058.10.026109
MA0059.10.0364428
MA0060.10.00317807
MA0061.10.0633566
MA0063.10
MA0066.11.72995
MA0067.10.166674
MA0068.10.00767217
MA0069.10.122464
MA0070.10.556441
MA0071.10.546794
MA0072.11.01969
MA0073.14.82164e-17
MA0074.10.0236924
MA0076.10.000114091
MA0077.10.672423
MA0078.10.629221
MA0081.10.406981
MA0083.11.90373
MA0084.10.178408
MA0087.10.288052
MA0088.10.001237
MA0089.10
MA0090.10.462503
MA0091.11.51798
MA0092.10.991789
MA0093.10.0039742
MA0095.10
MA0098.10
MA0100.10.0188857
MA0101.10.0285275
MA0103.14.68131
MA0105.10.0550177
MA0106.10.00430673
MA0107.10.0190575
MA0108.20.530987
MA0109.10
MA0111.10.441432
MA0113.10.122798
MA0114.10.00480456
MA0115.10.00630366
MA0116.10.242646
MA0117.10.172442
MA0119.14.64972
MA0122.10.560524
MA0124.10.553445
MA0125.10.662355
MA0130.10
MA0131.10.000715131
MA0132.10
MA0133.10
MA0135.18.15784
MA0136.10.00715144
MA0139.10.0286257
MA0140.10.429251
MA0141.10.286019
MA0142.10.146526
MA0143.10.609036
MA0144.10.0145259
MA0145.10.128651
MA0146.10.00483439
MA0147.10.0156149
MA0148.10.541619
MA0149.16.14547e-07
MA0062.26.32979e-08
MA0035.20.900138
MA0039.21.81817e-11
MA0138.23.0562
MA0002.20.132147
MA0137.20.00831176
MA0104.20.00393412
MA0047.20.222545
MA0112.20.0721976
MA0065.20.21546
MA0150.10.714375
MA0151.10
MA0152.10.222815
MA0153.12.27321
MA0154.10.972673
MA0155.10.078492
MA0156.10.00311088
MA0157.10.186377
MA0158.10
MA0159.10.26332
MA0160.10.341972
MA0161.10
MA0162.11.69917e-08
MA0163.18.63435e-06
MA0164.10.742576
MA0080.20.0036354
MA0018.20.0088289
MA0099.20.0532084
MA0079.20
MA0102.20.601136
MA0258.10.774211
MA0259.10.000537073
MA0442.10
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