FFCP PHASE1:Hg19::chr6:116601228..116601257,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:116601228..116601257,+
|short_description=p6@DSE
|description=CAGE_peak_6_at_DSE_5end
|association_with_transcript=-25bp_to_ENST00000430252,ENST00000452085...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29940 | |EntrezGene=29940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21144 | |HGNC=21144 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL01 | |UniProt=Q9UL01 | ||
|association_with_transcript=-25bp_to_ENST00000430252,ENST00000452085,NM_001080976,uc003pwr.2,uc003pws.2_5end | |||
|cluster_id=chr6:116601228..116601257,+ | |||
|description=CAGE_peak_6_at_DSE_5end | |||
|id=chr6:116601228..116601257,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.98e-12!52;CL:0000542!3.68e-12!53;CL:0000051!3.68e-12!53;CL:0000791!8.12e-09!18;CL:0000789!8.12e-09!18;CL:0002420!8.12e-09!18;CL:0002419!8.12e-09!18;CL:0000790!8.12e-09!18;CL:0000236!3.91e-07!14;CL:0000084!4.16e-07!25;CL:0000827!4.16e-07!25;CL:0000625!4.43e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.11e-11;18!CL:0000789;1.11e-11;18!CL:0002419;1.11e-11;18!CL:0000625;3.64e-11;11!CL:0000542;2.68e-09;53!CL:0000236;3.14e-09;13!CL:0000084;1.12e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-14,52;CL:0000542,5.21e-14,53;CL:0000051,5.21e-14,53;CL:0000791,8.38e-12,18;CL:0000789,8.38e-12,18;CL:0002420,8.38e-12,18;CL:0002419,8.38e-12,18;CL:0000790,8.38e-12,18;CL:0000625,2.51e-11,11;CL:0000084,9.95e-09,25;CL:0000827,9.95e-09,25;CL:0000236,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-11;18!CL:0000051;2.68e-09;53!UBERON:0006601;3.41e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.14e-22!69;UBERON:0006238!2.14e-22!69;UBERON:0001049!1.67e-21!57;UBERON:0005068!1.67e-21!57;UBERON:0006241!1.67e-21!57;UBERON:0007135!1.67e-21!57;UBERON:0002616!2.88e-21!59;UBERON:0007023!9.04e-21!115;UBERON:0001017!5.84e-20!82;UBERON:0005743!1.73e-19!86;UBERON:0002780!1.14e-18!41;UBERON:0001890!1.14e-18!41;UBERON:0006240!1.14e-18!41;UBERON:0003080!1.22e-17!42;UBERON:0000073!2.36e-17!94;UBERON:0001016!2.36e-17!94;UBERON:0000153!4.51e-15!129;UBERON:0007811!4.51e-15!129;UBERON:0003075!5.19e-15!86;UBERON:0007284!5.19e-15!86;UBERON:0001893!9.52e-15!34;UBERON:0002020!1.46e-14!34;UBERON:0003528!1.46e-14!34;UBERON:0002346!1.93e-14!90;UBERON:0002791!2.27e-14!33;UBERON:0001869!1.00e-13!32;UBERON:0000033!3.10e-13!123;UBERON:0003056!6.58e-13!61;UBERON:0002619!5.92e-10!22;UBERON:0000956!7.22e-10!25;UBERON:0000203!7.22e-10!25;UBERON:0004121!8.35e-09!169;UBERON:0001950!8.36e-09!20;UBERON:0000924!1.19e-08!173;UBERON:0006601!1.19e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.36e-19;53!UBERON:0002616;6.36e-19;53!UBERON:0002780;6.45e-19;41!UBERON:0001890;6.45e-19;41!UBERON:0003528;2.13e-16;34!UBERON:0002020;2.13e-16;34!UBERON:0002791;3.98e-16;32!UBERON:0001869;4.50e-16;32!UBERON:0001893;8.61e-16;34!UBERON:0002619;4.46e-13;22!UBERON:0000955;1.41e-11;68!UBERON:0000125;4.45e-11;9!UBERON:0002308;4.45e-11;9!UBERON:0000956;5.61e-11;25!UBERON:0000203;5.61e-11;25!UBERON:0001950;6.96e-11;20!UBERON:0001017;1.92e-10;75!UBERON:0007023;4.45e-10;114!UBERON:0009663;1.87e-09;7!UBERON:0001016;5.13e-09;83!UBERON:0002420;6.51e-09;9!UBERON:0007245;6.51e-09;9!UBERON:0010009;6.51e-09;9!UBERON:0010011;6.51e-09;9!UBERON:0000454;6.51e-09;9!UBERON:0000200;3.06e-08;6!UBERON:0004733;3.37e-08;12!UBERON:0002028;3.37e-08;12!UBERON:0001894;1.46e-07;7!UBERON:0002298;1.67e-07;6!UBERON:0003296;1.73e-07;4!UBERON:0010133;1.73e-07;4!UBERON:0004732;2.13e-07;13 | |||
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|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.495065411840187,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0.572471974262113,0.410623275218653,0.502170558379211,0.152826811495903,0.0821005894499457,0.236132343941038,1.57345710739562,1.53531759238885,0.928896739896456,0,0,0.739508020333575,0.542270404062111,0.568676929949686,2.34880351467878,1.10799081706375,0,0.434021741431704,0.671746422719773,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0,0,3.51992488922645,2.73069305631066,1.77901850772711,2.13365111283254,2.00197993518006,0.574752439954483,3.96626923670917,2.86216126360609,1.1384259382189,2.34894875748376,1.52909291250092,0,0,0.526768169550154,0.786839080455332,1.57204305099666,2.05601498999509,0.668745981562712,1.62961133316795,1.89379122293893,0,1.00269411196656,0.589211814949674,2.21533894583621,1.89562704635511,0.640456598628376,1.04047478047903,0.328875809207352,0.276350017785848,0.579606171470105,1.63115219478266,1.07016331235885,2.09071047609954,0.679856056185397,1.14966148080576,2.06176467289578,2.02415753615602,1.91139248594458,3.25541726928209,3.8018081777935,1.50575119077773,0.639933055772092,2.49861453104692,1.18388626022008,1.64225599384209,3.42731463482045,2.13952156626806,2.02754165435919,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.850813354476611,0.221729397462564,0.702678285545008,1.83370705696798,0,0.741568885568859,0.324547393654683,0.174129737299267,0.132957960518865,0,1.71598473234038,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.77883131343355,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,1.53316637465883,0,0,1.31780417436063,0,0.872188104285069,0,0.12663051166458,1.05927344650575,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.756787138224657,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0,0.816616685019573,0.245668634623536,0.413303124703062,0,0.247266929278557,0.910161361938026,0,0.505008341862199,0.500474079487857,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.640672166455702,0.635795703478686,0,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0.552299391853796,0.80823028409406,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,2.16563844500876,0.118306800039844,0.337169380156203,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0.329250856225877,0,0.100528972411631,0.925884451585296,0,0,0,0.927443239800615,0.234817388471643,0,0,0,0,0.858486162094873,0.738651018262192,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.985326475791887,0.792435906119034,1.24396869324463,1.00883967391873,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0.517086863031111,0,0.845302752556,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,1.08524321078289,1.64648067356154,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.179060963239896,0.336255431980582,2.56139988262505,2.80315847317372,3.7219480521127,0,0,0,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0.613457458595699,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.347534457872331,0.195801157462741,0.343143423810856,1.24060815673732,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0.248107807818777,0.61384789315225,0,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0,0.246381468041427,0,0,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0.438519753291869,0,0.256450125116389,0.328014645699706,0,1.03041011647722,0.640986253728404,1.32015199872941,0,0,0,0.193341436584244,0.616194468458578,0.460511024178389,0.137836572484531,1.50388342815583,1.16013355131383,0.426133137080504,0,0.330569830721956,0,1.27612712494584,0,0,0.62962469366128,0,0,0.532306030317022,0.869932992075073,0,0,1.116475108079,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,1.06428319221179,0.211107635297664,0.658589785919804,0,0,0.192444225451024,0,0,1.22386941009813,0,0,0,0.229723400206959,0.507447609232169,0,0,0.952927101831156,1.23408681925858,0,1.080062874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| ||
|short_description=p6@DSE | |||
}} | }} |
Latest revision as of 00:51, 20 September 2015
Short description: | p6@DSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DSE_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000430252, ENST00000452085, NM_001080976, uc003pwr.2, uc003pws.2_5end |
EntrezGene: | DSE |
HGNC: | 21144 |
UniProt: | Q9UL01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.87e-14 | 52 |
lymphocyte | 5.21e-14 | 53 |
common lymphoid progenitor | 5.21e-14 | 53 |
mature alpha-beta T cell | 8.38e-12 | 18 |
alpha-beta T cell | 8.38e-12 | 18 |
immature T cell | 8.38e-12 | 18 |
mature T cell | 8.38e-12 | 18 |
immature alpha-beta T cell | 8.38e-12 | 18 |
CD8-positive, alpha-beta T cell | 2.51e-11 | 11 |
T cell | 9.95e-09 | 25 |
pro-T cell | 9.95e-09 | 25 |
B cell | 1.86e-08 | 14 |