FFCP PHASE1:Hg19::chr6:136359113..136359127,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:136359113..136359127,+
|short_description=p9@PDE7B
|description=CAGE_peak_9_at_PDE7B_5end
|association_with_transcript=-46bp_to_uc003qgr.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27115 | |EntrezGene=27115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8792 | |HGNC=8792 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_uc003qgr.2_5end | |||
|cluster_id=chr6:136359113..136359127,+ | |||
|description=CAGE_peak_9_at_PDE7B_5end | |||
|id=chr6:136359113..136359127,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.15e-26!75;CL:0000055!1.65e-21!180;CL:0002620!1.06e-20!23;CL:0000183!2.65e-09!59;CL:0000680!3.58e-09!57;CL:0000056!3.58e-09!57;CL:0000355!3.58e-09!57;CL:0002494!4.93e-09!16;CL:0000187!1.03e-08!54;CL:0000048!2.95e-07!430;CL:0000393!4.97e-07!60;CL:0000211!4.97e-07!60;CL:0000723!9.24e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.64e-24;23!CL:0002539;6.61e-11;10!CL:0000359;2.61e-07;32!CL:0000135;7.11e-07;3!CL:0000388;7.11e-07;3!CL:0000057;8.43e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.33e-24,23;CL:0000057,3.69e-16,76;CL:0002539,4.67e-11,10;CL:0000048,1.02e-07,427;CL:0000359,1.27e-07,32;CL:0000723,1.71e-07,433;CL:0000034,3.33e-07,441;CL:0000135,9.55e-07,3;CL:0000388,9.55e-07,3;CL:0000192,9.94e-07,43;CL:0000514,9.94e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.18e-08;5!DOID:450;3.18e-08;5!DOID:66;3.18e-08;5!DOID:423;3.18e-08;5!DOID:0080000;3.18e-08;5!DOID:11722;3.18e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.19e-08,5;DOID:450,2.19e-08,5;DOID:66,2.19e-08,5;DOID:423,2.19e-08,5;DOID:0080000,2.19e-08,5;DOID:11722,2.19e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.83e-14!45;UBERON:0002416!2.83e-14!45;UBERON:0000914!1.33e-13!83;UBERON:0002329!1.33e-13!83;UBERON:0003077!1.33e-13!83;UBERON:0003059!1.33e-13!83;UBERON:0007282!1.33e-13!83;UBERON:0009618!1.33e-13!83;UBERON:0007285!1.33e-13!83;UBERON:0002097!1.96e-13!40;UBERON:0004290!6.28e-13!70;UBERON:0003102!7.87e-11!95;UBERON:0000486!9.24e-11!82;UBERON:0000475!1.12e-09!365;UBERON:0004535!4.18e-09!110;UBERON:0002385!1.06e-08!63;UBERON:0001015!1.06e-08!63;UBERON:0000383!1.06e-08!63;UBERON:0004872!1.36e-08!84;UBERON:0001134!1.39e-08!61;UBERON:0002036!1.39e-08!61;UBERON:0003082!1.39e-08!61;UBERON:0001009!1.63e-08!113;UBERON:0000468!1.76e-08!659;UBERON:0002049!5.00e-08!79;UBERON:0007798!5.00e-08!79;UBERON:0002067!1.97e-07!9;UBERON:0004016!1.97e-07!9;UBERON:0010083!1.97e-07!9;UBERON:0000467!2.43e-07!625;UBERON:0000948!2.71e-07!24;UBERON:0005498!2.71e-07!24;UBERON:0004140!2.71e-07!24;UBERON:0009881!2.71e-07!24;UBERON:0004141!2.71e-07!24;UBERON:0003084!2.71e-07!24;UBERON:0007005!2.71e-07!24;UBERON:0004139!2.71e-07!24;UBERON:0004291!2.71e-07!24;UBERON:0000480!2.92e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.31e-13;41!UBERON:0002199;6.60e-12;46!UBERON:0002416;6.60e-12;46!UBERON:0004237;6.61e-11;10!UBERON:0004695;6.61e-11;10!UBERON:0002111;6.61e-11;10!UBERON:0004178;6.61e-11;10!UBERON:0003102;9.01e-10;50!UBERON:0004573;2.06e-08;33!UBERON:0004571;2.06e-08;33!UBERON:0002067;9.79e-08;9!UBERON:0001135;3.65e-07;15!UBERON:0000947;4.31e-07;21!UBERON:0010191;4.31e-07;21!UBERON:0007846;7.11e-07;3!UBERON:0000043;7.11e-07;3!UBERON:0007845;7.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.58e-20,41;UBERON:0002199,1.64e-17,46;UBERON:0002416,1.64e-17,46;UBERON:0004237,4.67e-11,10;UBERON:0004695,4.67e-11,10;UBERON:0002111,4.67e-11,10;UBERON:0004178,4.67e-11,10;UBERON:0004573,2.23e-09,33;UBERON:0004571,2.23e-09,33;UBERON:0003102,1.10e-08,99;UBERON:0002067,1.55e-07,9;UBERON:0004016,1.55e-07,9;UBERON:0010083,1.55e-07,9;UBERON:0002329,1.71e-07,71;UBERON:0003059,1.71e-07,71;UBERON:0007282,1.71e-07,71;UBERON:0004290,1.71e-07,71;UBERON:0009618,1.71e-07,71;UBERON:0003077,2.36e-07,72;UBERON:0007285,2.36e-07,72;UBERON:0001135,2.92e-07,15;UBERON:0007524,3.23e-07,73;UBERON:0000947,3.58e-07,21;UBERON:0010191,3.58e-07,21;UBERON:0001637,5.00e-07,42;UBERON:0003509,5.00e-07,42;UBERON:0004572,5.00e-07,42;UBERON:0007846,9.55e-07,3;UBERON:0000043,9.55e-07,3;UBERON:0007845,9.55e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.724232594804119,0,0,0.0945348171640679,0,0.43917392846563,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.775250277507987,0.35576626268671,1.00416183829401,0,0,0,0,0,0.267899184852239,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,3.72887606973458,0.709336764396714,0.560677600142307,0,0.74000264525148,0.622422070799533,0.269421344139376,0.653847612453835,0.756787138224657,1.15235184896,0,0.936480230490962,0.570471821544449,1.04614076386261,0.352303495931295,0.323745888736263,1.26405726032024,0.204154171254893,0.122834317311768,0.723280468230358,0,2.96720315134268,0,0,0.168336113954066,0.375355559615893,0,0.438977620880838,0.612975591598039,2.10333282469236,0.113432183160021,0.89694817844431,1.49490172172997,0.847727604638247,1.20036438433761,1.8549455262919,1.03056216018252,0.18611685633159,1.5189869901714,0.584622030967192,5.04867548488229,1.28869858099219,1.45481451136931,2.4850671476163,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,1.52631302506568,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.925258162815933,0.532685175939381,2.13530605635904,0.519254429183621,0.929683027679674,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0,0.413509717453592,0.537101224341368,0.435050081742686,0.340906509664404,0.178064071293475,0,0,0,0,1.39453664789186,1.88887408098384,2.0911118104818,0,0,4.34966496037536,0,0.429374660225974,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0.95460974377781,0,0,0.54907405947211,0,0.404364963146632,1.58510321173008,0,0,0.974853958525138,0,0,0.141405431953713,0,1.65409603063837,1.32687795048244,0,0,1.31178950409327,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0.354761064070598,0.633322905892992,0.329294892959902,1.51789269506286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0.934853239388898,1.10961172300523,0.568209015825267,1.0062716070103,1.77962244319307,0.228840068396924,1.81477108515887,0.932623203496683,1.77426179987561,0.159296767163702,0,0.621051827505038,1.24411862352257,0,0,0,0,0,0.545545977607678,0.214821114084977,0.464033759878494,0.398095888698616,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0.255788742607303,0.646948868380091,0,0,1.69732529954025,2.12574920101683,0,0.558644917973244,0.318004350653419,0,0,0,0,0.449604575675217,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,1.41404030924402,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,1.11598505450025,0.924351257262837,2.16313281061895,0,0,0.126698501011437,0,0,0,0,0,0,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| ||
|short_description=p9@PDE7B | |||
}} | }} |
Latest revision as of 23:51, 24 September 2015
Short description: | p9@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE7B_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_uc003qgr.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.33e-24 | 23 |
fibroblast | 3.69e-16 | 76 |
aortic smooth muscle cell | 4.67e-11 | 10 |
multi fate stem cell | 1.02e-07 | 427 |
vascular associated smooth muscle cell | 1.27e-07 | 32 |
somatic stem cell | 1.71e-07 | 433 |
stem cell | 3.33e-07 | 441 |
fibrocyte | 9.55e-07 | 3 |
tendon cell | 9.55e-07 | 3 |
smooth muscle cell | 9.94e-07 | 43 |
smooth muscle myoblast | 9.94e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.58e-20 | 41 |
integument | 1.64e-17 | 46 |
integumental system | 1.64e-17 | 46 |
blood vessel smooth muscle | 4.67e-11 | 10 |
arterial system smooth muscle | 4.67e-11 | 10 |
artery smooth muscle tissue | 4.67e-11 | 10 |
aorta smooth muscle tissue | 4.67e-11 | 10 |
systemic artery | 2.23e-09 | 33 |
systemic arterial system | 2.23e-09 | 33 |
surface structure | 1.10e-08 | 99 |
dermis | 1.55e-07 | 9 |
dermatome | 1.55e-07 | 9 |
future dermis | 1.55e-07 | 9 |
somite | 1.71e-07 | 71 |
presomitic mesoderm | 1.71e-07 | 71 |
presumptive segmental plate | 1.71e-07 | 71 |
dermomyotome | 1.71e-07 | 71 |
trunk paraxial mesoderm | 1.71e-07 | 71 |
paraxial mesoderm | 2.36e-07 | 72 |
presumptive paraxial mesoderm | 2.36e-07 | 72 |
smooth muscle tissue | 2.92e-07 | 15 |
dense mesenchyme tissue | 3.23e-07 | 73 |
aorta | 3.58e-07 | 21 |
aortic system | 3.58e-07 | 21 |
artery | 5.00e-07 | 42 |
arterial blood vessel | 5.00e-07 | 42 |
arterial system | 5.00e-07 | 42 |
dense regular connective tissue | 9.55e-07 | 3 |
tendon | 9.55e-07 | 3 |
regular connective tissue | 9.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.19e-08 | 5 |
myotonic disease | 2.19e-08 | 5 |
muscle tissue disease | 2.19e-08 | 5 |
myopathy | 2.19e-08 | 5 |
muscular disease | 2.19e-08 | 5 |
myotonic dystrophy | 2.19e-08 | 5 |