FFCP PHASE1:Hg19::chr7:138458781..138458814,-: Difference between revisions
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|id=chr7:138458781..138458814,-
|short_description=p4@ATP6V0A4
|description=CAGE_peak_4_at_ATP6V0A4_5end
|association_with_transcript=0bp_to_ENST00000393054,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50617 | |EntrezGene=50617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=866 | |HGNC=866 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBG4,A4D1R4,Q32M47 | |UniProt=Q9HBG4,A4D1R4,Q32M47 | ||
|association_with_transcript=0bp_to_ENST00000393054,ENST00000483139,NM_130841,uc003vuf.2_5end | |||
|cluster_id=chr7:138458781..138458814,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_ATP6V0A4_5end | |||
|id=chr7:138458781..138458814,- | |||
|ontology_enrichment_celltype=CL:0000039!7.42e-25!7;CL:0000586!7.42e-25!7;CL:0002322!1.18e-14!5;CL:0000047!1.30e-09!8;CL:0000540!1.80e-07!6;CL:0000031!1.80e-07!6;CL:0000404!1.80e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.06e-37;7!CL:0000586;1.06e-37;7!CL:0000047;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.07e-37,7;CL:0000586,1.07e-37,7 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.75e-18;1!UBERON:0008801;6.23e-18;1!UBERON:0009117;1.73e-07;10!UBERON:0005564;1.73e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!7.25e-10!22;DOID:2994!7.25e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:178;3.16e-18;1!DOID:326;3.16e-18;1!DOID:3978;3.16e-18;1!DOID:3394;3.16e-18;1!DOID:5844;3.16e-18;1!DOID:3095;2.75e-12;22!DOID:2994;2.75e-12;22!DOID:114;8.69e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.16e-18,1;DOID:326,3.16e-18,1;DOID:3978,3.16e-18,1;DOID:3394,3.16e-18,1;DOID:5844,3.16e-18,1;DOID:3095,2.75e-12,22;DOID:2994,2.75e-12,22;DOID:114,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!3.30e-11!2;UBERON:0003127!2.76e-10!2;UBERON:0000473!6.54e-10!8;UBERON:0001044!3.21e-08!6;UBERON:0003293!3.21e-08!6;UBERON:0003294!3.21e-08!6;UBERON:0010047!3.21e-08!6;UBERON:0000167!3.21e-08!6;UBERON:0003135!3.23e-07!11;UBERON:0000464!5.46e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.06e-34;2!UBERON:0001044;9.27e-26;6!UBERON:0003293;9.27e-26;6!UBERON:0003294;9.27e-26;6!UBERON:0010047;9.27e-26;6!UBERON:0003408;9.27e-26;6!UBERON:0000167;9.27e-26;6!UBERON:0001736;3.75e-18;1!UBERON:0001831;6.23e-18;1!UBERON:0001567;6.23e-18;1!UBERON:0002372;1.12e-17;1!UBERON:0001961;1.12e-17;1!UBERON:0001744;1.12e-17;1!UBERON:0001042;1.12e-17;1!UBERON:0001735;1.12e-17;1!UBERON:0000161;2.24e-14;19!UBERON:0000166;2.24e-14;19!UBERON:0001041;1.98e-11;14!UBERON:0000165;7.41e-10;28!UBERON:0004089;1.22e-09;2!UBERON:0006562;1.64e-09;2!UBERON:0000473;3.85e-09;8!UBERON:0004921;3.81e-07;33!UBERON:0003135;6.94e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.06e-34,2;UBERON:0001044,9.27e-26,6;UBERON:0003293,9.27e-26,6;UBERON:0003294,9.27e-26,6;UBERON:0010047,9.27e-26,6;UBERON:0000167,9.27e-26,6;UBERON:0001736,3.75e-18,1;UBERON:0006298,3.75e-18,1;UBERON:0001831,6.23e-18,1;UBERON:0001567,6.23e-18,1;UBERON:0008801,6.23e-18,1;UBERON:0002372,1.70e-17,1;UBERON:0001961,1.70e-17,1;UBERON:0001744,1.70e-17,1;UBERON:0001735,1.70e-17,1;UBERON:0003408,9.56e-16,10;UBERON:0000166,1.98e-12,22;UBERON:0004089,1.22e-09,2;UBERON:0000165,1.68e-09,29;UBERON:0000930,1.68e-09,29;UBERON:0000473,4.19e-09,8;UBERON:0000161,1.05e-07,36;UBERON:0003135,7.37e-07,11;UBERON:0002553,7.87e-07,61 | |||
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|short_description=p4@ATP6V0A4 | |||
}} | }} |
Latest revision as of 15:17, 16 September 2015
Short description: | p4@ATP6V0A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP6V0A4_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000393054, ENST00000483139, NM_130841, uc003vuf.2_5end |
EntrezGene: | ATP6V0A4 |
HGNC: | 866 |
UniProt: | Q9HBG4A4D1R4Q32M47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.07e-37 | 7 |
germ cell | 1.07e-37 | 7 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.06e-34 | 2 |
saliva-secreting gland | 9.27e-26 | 6 |
gland of oral region | 9.27e-26 | 6 |
gland of foregut | 9.27e-26 | 6 |
oral gland | 9.27e-26 | 6 |
oral cavity | 9.27e-26 | 6 |
submandibular gland | 3.75e-18 | 1 |
submandibular gland primordium | 3.75e-18 | 1 |
parotid gland | 6.23e-18 | 1 |
cheek | 6.23e-18 | 1 |
parotid gland primordium | 6.23e-18 | 1 |
tonsil | 1.70e-17 | 1 |
mucosa-associated lymphoid tissue | 1.70e-17 | 1 |
lymphoid tissue | 1.70e-17 | 1 |
tonsillar ring | 1.70e-17 | 1 |
gland of gut | 9.56e-16 | 10 |
oral opening | 1.98e-12 | 22 |
midface | 1.22e-09 | 2 |
mouth | 1.68e-09 | 29 |
stomodeum | 1.68e-09 | 29 |
testis | 4.19e-09 | 8 |
orifice | 1.05e-07 | 36 |
male reproductive organ | 7.37e-07 | 11 |
anatomical cavity | 7.87e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.16e-18 | 1 |
ischemia | 3.16e-18 | 1 |
extrinsic cardiomyopathy | 3.16e-18 | 1 |
myocardial ischemia | 3.16e-18 | 1 |
myocardial infarction | 3.16e-18 | 1 |
germ cell and embryonal cancer | 2.75e-12 | 22 |
germ cell cancer | 2.75e-12 | 22 |
heart disease | 8.69e-10 | 2 |