FFCP PHASE1:Hg19::chr7:94056523..94056567,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:94056523..94056567,+
|short_description=p8@COL1A2
|description=CAGE_peak_8_at_COL1A2_5end
|association_with_transcript=-56bp_to_ENST00000464916_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1278 | |EntrezGene=1278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2198 | |HGNC=2198 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000464916_5end | |||
|cluster_id=chr7:94056523..94056567,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_8_at_COL1A2_5end | |||
|id=chr7:94056523..94056567,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.55e-43!180;CL:0000057!7.13e-26!75;CL:0000680!1.33e-18!57;CL:0000056!1.33e-18!57;CL:0000355!1.33e-18!57;CL:0000187!7.93e-18!54;CL:0000183!9.23e-18!59;CL:0000192!6.98e-15!42;CL:0000514!6.98e-15!42;CL:0000393!8.84e-15!60;CL:0000211!8.84e-15!60;CL:0000048!9.66e-12!430;CL:0000723!7.79e-11!436;CL:0000359!1.67e-10!32;CL:0000034!3.41e-10!444;CL:0002620!2.69e-09!23;CL:0000499!8.45e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.05e-12;43!CL:0000359;4.99e-11;32!CL:0000187;1.05e-09;55!CL:0000057;2.24e-09;73!CL:0000499;1.82e-08;28!CL:0000134;3.73e-08;55!CL:0002320;4.57e-08;188!CL:0000393;7.95e-08;61!CL:0000211;7.95e-08;61!CL:0002620;1.02e-07;23!CL:0000723;1.29e-07;61!CL:0000327;2.69e-07;15!CL:0002494;3.78e-07;16!CL:0002334;5.70e-07;12!CL:0000048;5.79e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-25,76;CL:0000048,7.66e-19,427;CL:0000723,6.50e-18,433;CL:0000680,6.55e-18,58;CL:0000056,6.55e-18,58;CL:0000355,6.55e-18,58;CL:0000187,1.24e-17,55;CL:0000192,7.88e-17,43;CL:0000514,7.88e-17,43;CL:0000034,1.01e-16,441;CL:0000393,1.53e-14,61;CL:0000211,1.53e-14,61;CL:0000359,1.37e-11,32;CL:0002320,1.28e-08,361;CL:0000499,1.73e-08,28;CL:0000134,6.83e-08,354;CL:0002620,1.03e-07,23;CL:0000327,2.55e-07,15;CL:0002334,4.26e-07,12;CL:0002494,4.73e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.05e-12;43!CL:0000355;2.75e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.65e-22!83;UBERON:0002329!1.65e-22!83;UBERON:0003077!1.65e-22!83;UBERON:0003059!1.65e-22!83;UBERON:0007282!1.65e-22!83;UBERON:0009618!1.65e-22!83;UBERON:0007285!1.65e-22!83;UBERON:0004290!6.01e-20!70;UBERON:0001134!1.99e-19!61;UBERON:0002036!1.99e-19!61;UBERON:0003082!1.99e-19!61;UBERON:0002385!3.84e-18!63;UBERON:0001015!3.84e-18!63;UBERON:0000383!3.84e-18!63;UBERON:0000486!9.10e-16!82;UBERON:0005256!1.10e-12!143;UBERON:0004872!1.05e-09!84;UBERON:0002100!1.51e-09!216;UBERON:0000475!3.82e-09!365;UBERON:0002199!4.63e-08!45;UBERON:0002416!4.63e-08!45;UBERON:0003102!2.57e-07!95;UBERON:0000948!4.41e-07!24;UBERON:0005498!4.41e-07!24;UBERON:0004140!4.41e-07!24;UBERON:0009881!4.41e-07!24;UBERON:0004141!4.41e-07!24;UBERON:0003084!4.41e-07!24;UBERON:0007005!4.41e-07!24;UBERON:0004139!4.41e-07!24;UBERON:0004291!4.41e-07!24;UBERON:0001637!7.39e-07!42;UBERON:0003509!7.39e-07!42;UBERON:0004572!7.39e-07!42;UBERON:0000490!9.63e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.45e-08;198!UBERON:0004457;1.41e-07;9!UBERON:0000042;1.41e-07;9!UBERON:0003688;3.91e-07;6!UBERON:0002358;3.91e-07;6!UBERON:0003684;3.91e-07;6!UBERON:0001178;3.91e-07;6!UBERON:0001013;4.22e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.67e-18,62;UBERON:0002036,1.67e-18,62;UBERON:0003082,1.67e-18,62;UBERON:0002385,1.92e-17,64;UBERON:0001015,1.92e-17,64;UBERON:0000383,1.92e-17,64;UBERON:0007524,2.15e-17,73;UBERON:0002329,4.56e-17,71;UBERON:0003059,4.56e-17,71;UBERON:0007282,4.56e-17,71;UBERON:0004290,4.56e-17,71;UBERON:0009618,4.56e-17,71;UBERON:0003077,1.31e-16,72;UBERON:0007285,1.31e-16,72;UBERON:0000486,2.92e-14,83;UBERON:0007503,3.91e-14,78;UBERON:0005256,6.13e-12,122;UBERON:0003104,1.07e-10,160;UBERON:0009142,1.07e-10,160;UBERON:0004872,4.27e-09,83;UBERON:0002384,8.11e-09,371;UBERON:0002199,2.15e-08,46;UBERON:0002416,2.15e-08,46;UBERON:0001637,2.59e-08,42;UBERON:0003509,2.59e-08,42;UBERON:0004572,2.59e-08,42;UBERON:0000490,8.48e-08,148;UBERON:0000948,1.52e-07,24;UBERON:0005498,1.52e-07,24;UBERON:0004140,1.52e-07,24;UBERON:0009881,1.52e-07,24;UBERON:0004141,1.52e-07,24;UBERON:0003084,1.52e-07,24;UBERON:0007005,1.52e-07,24;UBERON:0004139,1.52e-07,24;UBERON:0004291,1.52e-07,24;UBERON:0004535,3.29e-07,109;UBERON:0001013,3.48e-07,14;UBERON:0004573,3.79e-07,33;UBERON:0004571,3.79e-07,33;UBERON:0003688,4.35e-07,6;UBERON:0002358,4.35e-07,6;UBERON:0003684,4.35e-07,6;UBERON:0001178,4.35e-07,6;UBERON:0002100,5.54e-07,199;UBERON:0003102,5.95e-07,99;UBERON:0000926,8.58e-07,315;UBERON:0004120,8.58e-07,315;UBERON:0006603,8.58e-07,315;UBERON:0002049,9.77e-07,78;UBERON:0007798,9.77e-07,78 | |||
|phase1_expression=4.90531624030503,10.2768251467672,6.3429481843187,9.00659685178174,7.15137751083661,6.10636966870258,7.59899634504932,1.89515962028049,1.30592814099919,0.245733936501509,0,0.436882744260345,3.4289707169699,0.37129905888014,1.65698687863958,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0.492484232307152,1.63200552995402,0.626909442956176,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,2.55725123687061,8.67453965722959,10.5280961233537,8.98048417557107,12.7245751528176,19.4653948121054,0.661743720148475,1.33037638477538,0.702678285545008,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,14.4121865991642,2.78587125662075,3.97227542439656,12.0471380714502,4.965357350777,5.60677600142307,4.2699598291882,2.4666754841716,0.311211035399766,2.02066008104532,1.14423332179421,7.11379909931178,8.06646294271999,0.70296429550139,1.24864030732128,0,0.747243402759005,0.352303495931295,0.161872944368132,0.702254033511242,1.22492502752936,1.35117749042945,1.44656093646072,3.56400857184616,12.3633464639278,2.73048408581408,3.59309070908119,1.0100166837244,0.875829639103749,0.554128230968366,5.26773145057006,5.51678032438235,7.51190294532984,2.04177929688038,6.45802688479903,9.39652510801697,8.05341224406335,9.90300617078528,3.60683852334536,7.21393512127762,4.65292140828975,9.62025093775217,4.87185025805993,4.29137416214995,4.23429533754577,5.98090410229604,11.005297368015,2.01504196455281,1.69560592310488,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0.36497735907583,3.12899064659632,9.00537313470039,0,3.71494342425583,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,6.9967581926338,8.82052268313252,0,0,1.18157981336281,0,0,0.686271241194102,0,0,0,0,0.651616610620649,2.07986957055916,1.44331342025273,0,1.40890433082986,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0.897048674762886,1.30788020649984,0.80672114403045,3.87815147273333,3.57656445851882,3.381211010224,2.39344304926383,0,0.257207374262142,0,1.5985330740966,4.57529579706072,5.42621605391443,1.64648067356154,1.62868092146868,3.19852753868291,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,1.4377491329495,4.59447743336456,0,2.17171960001369,1.64381058040307,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.858840442033979,2.00068208423871,0.542530047399471,19.3412901223651,29.2623541627345,13.5624076929184,6.2084949946138,3.31040709700491,2.27407504055985,3.10419213877515,3.32112799267718,5.34670588770939,1.82455590382974,5.09083009403126,6.86286847621712,0,0,0,0.303127571446259,9.98612637062982,2.41912234663744,9.42809669711352,7.51963669111506,14.0330047216537,7.30393150757495,6.14048698880044,12.707459770345,0,1.54209693802656,3.72879623157567,0.657017248110473,3.63478100428535,1.74315567689939,0,0,0,3.09999010044438,4.55227920016793,4.06485686374215,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0.650060246036521,3.21367859688319,0.676695028044854,0.308097234229289,1.68854042198743,0.413509717453592,2.36324538710202,3.33538396002726,0.767039646744908,4.45160178233687,0,0,0,0,5.11330104227014,16.6850543820239,2.7881490806424,2.15623506123262,1.59691809095107,0,1.48259375283136,0.286249773483982,2.232950216158,1.89827654831236,3.24071329670502,2.81487570442467,4.2793898803392,1.59101623962968,1.56989728039846,2.51821440616641,3.56898138656871,2.23843564456804,1.41527737101321,0,2.52755073743389,2.92580243453754,2.68084838594413,1.05650146756755,2.32049849393576,3.25232493493539,3.39024349860728,3.85955740482287,2.65375590096488,2.63070531152258,5.78775534266688,9.83842128069949,2.63783490051515,2.16876448669825,1.69017361519345,0.860468113224309,2.16147890228867,1.426684205925,0.709522128141196,5.9110137883346,7.57378253807774,1.51789269506286,1.74967360122491,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.86493381685228,0.296964680832639,1.22864280839693,0,0,0,0,0,0.796991953004279,0,0,0,0,8.3980688668688,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.61595542857974,0,0,0,0,1.5950057986596,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,27.2876400081588,0,0,0,0,1.18375320854817,4.83962864194656,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0.859930162358083,0,0,0,0,0,6.10148000107438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951329442515298,0.941425616810999,0.407992870545287,0,0,0,0,3.86788897277961,0,4.74780082162832,1.14580212005842,0,0.199679000498991,0,0,1.6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| ||
|short_description=p8@COL1A2 | |||
}} | }} |
Latest revision as of 02:55, 20 September 2015
Short description: | p8@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -56bp_to_ENST00000464916_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-25 | 76 |
multi fate stem cell | 7.66e-19 | 427 |
somatic stem cell | 6.50e-18 | 433 |
muscle precursor cell | 6.55e-18 | 58 |
myoblast | 6.55e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.55e-18 | 58 |
muscle cell | 1.24e-17 | 55 |
smooth muscle cell | 7.88e-17 | 43 |
smooth muscle myoblast | 7.88e-17 | 43 |
stem cell | 1.01e-16 | 441 |
electrically responsive cell | 1.53e-14 | 61 |
electrically active cell | 1.53e-14 | 61 |
vascular associated smooth muscle cell | 1.37e-11 | 32 |
connective tissue cell | 1.28e-08 | 361 |
stromal cell | 1.73e-08 | 28 |
mesenchymal cell | 6.83e-08 | 354 |
skin fibroblast | 1.03e-07 | 23 |
extracellular matrix secreting cell | 2.55e-07 | 15 |
preadipocyte | 4.26e-07 | 12 |
cardiocyte | 4.73e-07 | 16 |