FFCP PHASE1:Hg19::chr10:120840292..120840303,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8661 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3271 | |||
|TSSclassifier=strong | |||
|UniProt=Q14152 | |||
|association_with_transcript=12bp_to_ENST00000369144_5end | |||
|cluster_id=chr10:120840292..120840303,- | |||
|description=CAGE_peak_2_at_EIF3A_5end | |||
|id=chr10:120840292..120840303,- | |||
|ontology_enrichment_celltype=CL:0000037!1.91e-32!172;CL:0000566!1.91e-32!172;CL:0002032!5.71e-31!165;CL:0000837!5.71e-31!165;CL:0000988!5.68e-30!182;CL:0000763!2.74e-29!112;CL:0000049!2.74e-29!112;CL:0002009!1.51e-26!65;CL:0002087!9.07e-26!119;CL:0000860!1.34e-25!45;CL:0002194!2.03e-25!63;CL:0000576!2.03e-25!63;CL:0000040!2.03e-25!63;CL:0000559!2.03e-25!63;CL:0000557!8.08e-25!71;CL:0002031!1.27e-24!124;CL:0002057!1.47e-24!42;CL:0000839!5.63e-24!70;CL:0000738!1.94e-23!140;CL:0000766!1.80e-21!76;CL:0000134!6.75e-20!358;CL:0002320!2.28e-17!365;CL:0000219!3.66e-17!390;CL:0000048!5.96e-13!430;CL:0000034!1.05e-12!444;CL:0000723!1.07e-12!436;CL:0000063!1.05e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.42e-20;33!CL:0002057;6.42e-20;33!CL:0000473;3.35e-17;39!CL:0000234;3.35e-17;39!CL:0000576;1.75e-16;48!CL:0000766;2.08e-10;69!CL:0000763;1.26e-09;100!CL:0002087;1.86e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.58e-32,168;CL:0002032,2.20e-30,161;CL:0000837,2.20e-30,161;CL:0000988,5.56e-30,177;CL:0000763,7.69e-29,108;CL:0000049,7.69e-29,108;CL:0002009,2.13e-26,61;CL:0002087,2.81e-25,115;CL:0002194,2.89e-25,59;CL:0000576,2.89e-25,59;CL:0000040,2.89e-25,59;CL:0000559,2.89e-25,59;CL:0000473,4.13e-25,48;CL:0000234,4.13e-25,48;CL:0000557,1.46e-24,67;CL:0000860,1.47e-24,42;CL:0002057,1.47e-24,42;CL:0002031,4.10e-24,120;CL:0000839,1.04e-23,66;CL:0000738,6.73e-23,136;CL:0000766,4.08e-21,72;CL:0000134,2.53e-19,354;CL:0002320,7.90e-17,361;CL:0000219,1.30e-16,386;CL:0000048,1.35e-12,427;CL:0000034,2.39e-12,441;CL:0000723,2.41e-12,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-18;42!CL:0000049;5.19e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!5.59e-10!39;DOID:2531!1.54e-09!51;DOID:0060083!1.54e-09!51;DOID:8692!1.86e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.62e-08;31!DOID:1240;7.23e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.59e-10,39;DOID:2531,1.54e-09,51;DOID:0060083,1.54e-09,51;DOID:8692,1.86e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-22!102;UBERON:0003061!3.58e-22!102;UBERON:0001474!3.71e-21!86;UBERON:0002371!4.72e-21!80;UBERON:0002193!2.65e-19!112;UBERON:0004765!1.27e-17!101;UBERON:0001434!1.27e-17!101;UBERON:0002405!1.41e-16!115;UBERON:0002384!1.48e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-21,98;UBERON:0003061,1.04e-21,98;UBERON:0001474,9.59e-21,82;UBERON:0002371,1.14e-20,76;UBERON:0002193,8.29e-19,108;UBERON:0002405,5.89e-18,93;UBERON:0004765,1.11e-17,90;UBERON:0002384,5.02e-16,371;UBERON:0001434,2.49e-15,100 | |||
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| |||
|short_description=p2@EIF3A | |||
}} |
Latest revision as of 17:02, 16 September 2015
Short description: | p2@EIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EIF3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000369144_5end |
EntrezGene: | EIF3A |
HGNC: | 3271 |
UniProt: | Q14152 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.58e-32 | 168 |
hematopoietic oligopotent progenitor cell | 2.20e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-30 | 161 |
hematopoietic cell | 5.56e-30 | 177 |
myeloid cell | 7.69e-29 | 108 |
common myeloid progenitor | 7.69e-29 | 108 |
macrophage dendritic cell progenitor | 2.13e-26 | 61 |
nongranular leukocyte | 2.81e-25 | 115 |
monopoietic cell | 2.89e-25 | 59 |
monocyte | 2.89e-25 | 59 |
monoblast | 2.89e-25 | 59 |
promonocyte | 2.89e-25 | 59 |
defensive cell | 4.13e-25 | 48 |
phagocyte | 4.13e-25 | 48 |
granulocyte monocyte progenitor cell | 1.46e-24 | 67 |
classical monocyte | 1.47e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-24 | 42 |
hematopoietic lineage restricted progenitor cell | 4.10e-24 | 120 |
myeloid lineage restricted progenitor cell | 1.04e-23 | 66 |
leukocyte | 6.73e-23 | 136 |
myeloid leukocyte | 4.08e-21 | 72 |
mesenchymal cell | 2.53e-19 | 354 |
connective tissue cell | 7.90e-17 | 361 |
motile cell | 1.30e-16 | 386 |
multi fate stem cell | 1.35e-12 | 427 |
stem cell | 2.39e-12 | 441 |
somatic stem cell | 2.41e-12 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-21 | 98 |
blood island | 1.04e-21 | 98 |
bone element | 9.59e-21 | 82 |
bone marrow | 1.14e-20 | 76 |
hemolymphoid system | 8.29e-19 | 108 |
immune system | 5.89e-18 | 93 |
skeletal element | 1.11e-17 | 90 |
connective tissue | 5.02e-16 | 371 |
skeletal system | 2.49e-15 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.59e-10 | 39 |
hematologic cancer | 1.54e-09 | 51 |
immune system cancer | 1.54e-09 | 51 |
myeloid leukemia | 1.86e-08 | 31 |