FFCP PHASE1:Hg19::chr10:123687497..123687562,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=782 | |||
|TSSclassifier=strong | |||
|UniProt=O95260,B4E107 | |||
|association_with_transcript=0bp_to_ENST00000224652,ENST00000369040,ENST00000369043,NM_001001976,NM_007041,uc001lfp.2,uc001lfq.2,uc010qtr.1,uc010qts.1_5end | |||
|cluster_id=chr10:123687497..123687562,- | |||
|description=CAGE_peak_1_at_ATE1_5end | |||
|id=chr10:123687497..123687562,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.39e-40!115;UBERON:0001049!5.96e-16!57;UBERON:0005068!5.96e-16!57;UBERON:0006241!5.96e-16!57;UBERON:0007135!5.96e-16!57;UBERON:0003080!1.18e-14!42;UBERON:0002780!3.92e-14!41;UBERON:0001890!3.92e-14!41;UBERON:0006240!3.92e-14!41;UBERON:0000073!8.08e-14!94;UBERON:0001016!8.08e-14!94;UBERON:0005743!4.59e-13!86;UBERON:0001017!5.58e-13!82;UBERON:0002616!4.08e-12!59;UBERON:0001893!5.74e-12!34;UBERON:0000955!1.09e-11!69;UBERON:0006238!1.09e-11!69;UBERON:0002791!1.65e-11!33;UBERON:0002346!1.84e-11!90;UBERON:0003075!2.45e-11!86;UBERON:0007284!2.45e-11!86;UBERON:0002020!3.19e-11!34;UBERON:0003528!3.19e-11!34;UBERON:0001869!6.51e-11!32;UBERON:0003056!5.76e-09!61;UBERON:0002619!6.18e-09!22;UBERON:0001950!2.04e-08!20;UBERON:0000153!2.06e-08!129;UBERON:0007811!2.06e-08!129;UBERON:0000956!3.72e-08!25;UBERON:0000203!3.72e-08!25;UBERON:0000033!3.79e-07!123;UBERON:0000924!6.43e-07!173;UBERON:0006601!6.43e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.72e-11;114!UBERON:0002780;1.36e-10;41!UBERON:0001890;1.36e-10;41!UBERON:0001893;3.94e-10;34!UBERON:0002791;6.20e-10;32!UBERON:0001869;7.46e-10;32!UBERON:0003528;1.35e-09;34!UBERON:0002020;1.35e-09;34!UBERON:0002619;7.06e-09;22!UBERON:0000073;1.06e-08;53!UBERON:0002616;1.06e-08;53!UBERON:0001950;2.31e-08;20!UBERON:0000956;4.51e-08;25!UBERON:0000203;4.51e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-39,114;UBERON:0001049,1.92e-15,56;UBERON:0005068,1.92e-15,56;UBERON:0006241,1.92e-15,56;UBERON:0007135,1.92e-15,56;UBERON:0000073,2.69e-14,53;UBERON:0002616,2.69e-14,53;UBERON:0002780,3.92e-14,41;UBERON:0001890,3.92e-14,41;UBERON:0003080,3.92e-14,41;UBERON:0006240,3.92e-14,41;UBERON:0001016,2.75e-13,89;UBERON:0001017,1.51e-12,81;UBERON:0011216,3.23e-12,223;UBERON:0001893,5.74e-12,34;UBERON:0000955,2.95e-11,68;UBERON:0006238,2.95e-11,68;UBERON:0003528,3.19e-11,34;UBERON:0002020,3.19e-11,34;UBERON:0002791,5.63e-11,32;UBERON:0001869,6.51e-11,32;UBERON:0002346,8.29e-11,86;UBERON:0003075,1.10e-10,82;UBERON:0007284,1.10e-10,82;UBERON:0002619,6.18e-09,22;UBERON:0003056,6.50e-09,61;UBERON:0001950,2.04e-08,20;UBERON:0000956,3.72e-08,25;UBERON:0000203,3.72e-08,25;UBERON:0010371,1.17e-07,104 | |||
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| |||
|short_description=p1@ATE1 | |||
}} |
Latest revision as of 19:29, 16 September 2015
Short description: | p1@ATE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000224652, ENST00000369040, ENST00000369043, NM_001001976, NM_007041, uc001lfp.2, uc001lfq.2, uc010qtr.1, uc010qts.1_5end |
EntrezGene: | ATE1 |
HGNC: | 782 |
UniProt: | O95260B4E107 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-39 | 114 |
neural tube | 1.92e-15 | 56 |
neural rod | 1.92e-15 | 56 |
future spinal cord | 1.92e-15 | 56 |
neural keel | 1.92e-15 | 56 |
regional part of nervous system | 2.69e-14 | 53 |
regional part of brain | 2.69e-14 | 53 |
regional part of forebrain | 3.92e-14 | 41 |
forebrain | 3.92e-14 | 41 |
anterior neural tube | 3.92e-14 | 41 |
future forebrain | 3.92e-14 | 41 |
nervous system | 2.75e-13 | 89 |
central nervous system | 1.51e-12 | 81 |
organ system subdivision | 3.23e-12 | 223 |
telencephalon | 5.74e-12 | 34 |
brain | 2.95e-11 | 68 |
future brain | 2.95e-11 | 68 |
brain grey matter | 3.19e-11 | 34 |
gray matter | 3.19e-11 | 34 |
regional part of telencephalon | 5.63e-11 | 32 |
cerebral hemisphere | 6.51e-11 | 32 |
neurectoderm | 8.29e-11 | 86 |
neural plate | 1.10e-10 | 82 |
presumptive neural plate | 1.10e-10 | 82 |
regional part of cerebral cortex | 6.18e-09 | 22 |
pre-chordal neural plate | 6.50e-09 | 61 |
neocortex | 2.04e-08 | 20 |
cerebral cortex | 3.72e-08 | 25 |
pallium | 3.72e-08 | 25 |
ecto-epithelium | 1.17e-07 | 104 |