FFCP PHASE1:Hg19::chr10:17279385..17279425,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:17279385..17279425,+ | |||
|coexpression_cluster_id=C2999 | |||
|description=CAGE_peak_at_chr10:17279385..17279425,+ | |||
|id=chr10:17279385..17279425,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.26e-22!180;CL:0000048!1.15e-16!430;CL:0000723!1.07e-15!436;CL:0002057!2.10e-15!42;CL:0002371!4.48e-15!591;CL:0000034!1.06e-14!444;CL:0002009!2.04e-14!65;CL:0000557!3.15e-14!71;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0000860!1.44e-13!45;CL:0000057!2.80e-13!75;CL:0000839!6.01e-13!70;CL:0000144!6.95e-12!625;CL:0000766!2.23e-11!76;CL:0000680!2.59e-09!57;CL:0000056!2.59e-09!57;CL:0000355!2.59e-09!57;CL:0000222!3.72e-09!119;CL:0002620!5.30e-09!23;CL:0000187!1.03e-08!54;CL:0002320!1.34e-08!365;CL:0000393!3.09e-08!60;CL:0000211!3.09e-08!60;CL:0000183!3.40e-08!59;CL:0000134!9.71e-08!358;CL:0000219!2.31e-07!390;CL:0000192!7.02e-07!42;CL:0000514!7.02e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.00e-20;33!CL:0002057;4.00e-20;33!CL:0000473;9.01e-19;39!CL:0000234;9.01e-19;39!CL:0000576;1.49e-09;48!CL:0002620;6.22e-09;23!CL:0000766;6.92e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.65e-21,48;CL:0000234,4.65e-21,48;CL:0000048,1.71e-19,427;CL:0000557,4.85e-19,67;CL:0002009,6.61e-19,61;CL:0000723,1.13e-18,433;CL:0000860,1.31e-18,42;CL:0002057,1.31e-18,42;CL:0002194,4.69e-18,59;CL:0000576,4.69e-18,59;CL:0000040,4.69e-18,59;CL:0000559,4.69e-18,59;CL:0000839,1.28e-17,66;CL:0000034,1.64e-17,441;CL:0000766,1.34e-15,72;CL:0000057,2.10e-12,76;CL:0002320,6.67e-12,361;CL:0000134,9.80e-11,354;CL:0000219,2.47e-09,386;CL:0002620,5.40e-09,23;CL:0000680,4.04e-07,58;CL:0000056,4.04e-07,58;CL:0000355,4.04e-07,58;CL:0000187,9.06e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;3.50e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.52e-26!167;UBERON:0003081!5.16e-17!216;UBERON:0004765!2.52e-16!101;UBERON:0001434!2.52e-16!101;UBERON:0002371!1.50e-15!80;UBERON:0001474!1.13e-14!86;UBERON:0000914!1.98e-13!83;UBERON:0002329!1.98e-13!83;UBERON:0003077!1.98e-13!83;UBERON:0003059!1.98e-13!83;UBERON:0007282!1.98e-13!83;UBERON:0009618!1.98e-13!83;UBERON:0007285!1.98e-13!83;UBERON:0004290!8.01e-12!70;UBERON:0002193!9.12e-12!112;UBERON:0002049!2.03e-11!79;UBERON:0007798!2.03e-11!79;UBERON:0002390!4.54e-11!102;UBERON:0003061!4.54e-11!102;UBERON:0000926!1.27e-10!448;UBERON:0004120!1.27e-10!448;UBERON:0006603!1.27e-10!448;UBERON:0004535!1.89e-10!110;UBERON:0001009!2.45e-10!113;UBERON:0001637!5.75e-10!42;UBERON:0003509!5.75e-10!42;UBERON:0004572!5.75e-10!42;UBERON:0000055!6.12e-10!69;UBERON:0002384!2.82e-09!375;UBERON:0001134!4.36e-09!61;UBERON:0002036!4.36e-09!61;UBERON:0003082!4.36e-09!61;UBERON:0004573!5.64e-09!33;UBERON:0004571!5.64e-09!33;UBERON:0000486!5.84e-09!82;UBERON:0001981!6.48e-09!60;UBERON:0007500!6.48e-09!60;UBERON:0004537!6.48e-09!60;UBERON:0006965!6.48e-09!60;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0000947!5.94e-08!21;UBERON:0010191!5.94e-08!21;UBERON:0002405!9.86e-08!115;UBERON:0000480!1.63e-07!626;UBERON:0004872!1.83e-07!84;UBERON:0000467!2.00e-07!625;UBERON:0000468!3.94e-07!659;UBERON:0002199!7.36e-07!45;UBERON:0002416!7.36e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.22e-10;33!UBERON:0004571;7.22e-10;33!UBERON:0000947;1.28e-09;21!UBERON:0010191;1.28e-09;21!UBERON:0001637;2.17e-08;42!UBERON:0003509;2.17e-08;42!UBERON:0004572;2.17e-08;42!UBERON:0002097;5.99e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.27e-27,167;UBERON:0000926,7.62e-23,315;UBERON:0004120,7.62e-23,315;UBERON:0006603,7.62e-23,315;UBERON:0002371,1.69e-20,76;UBERON:0003081,2.54e-20,203;UBERON:0001434,1.51e-19,100;UBERON:0001474,2.24e-18,82;UBERON:0004765,2.26e-18,90;UBERON:0002405,4.42e-16,93;UBERON:0002390,5.84e-15,98;UBERON:0003061,5.84e-15,98;UBERON:0002193,1.75e-14,108;UBERON:0002384,2.31e-12,371;UBERON:0001637,2.48e-11,42;UBERON:0003509,2.48e-11,42;UBERON:0004572,2.48e-11,42;UBERON:0004573,5.85e-11,33;UBERON:0004571,5.85e-11,33;UBERON:0007524,2.54e-10,73;UBERON:0002329,3.19e-10,71;UBERON:0003059,3.19e-10,71;UBERON:0007282,3.19e-10,71;UBERON:0004290,3.19e-10,71;UBERON:0009618,3.19e-10,71;UBERON:0003077,7.22e-10,72;UBERON:0007285,7.22e-10,72;UBERON:0002049,7.28e-10,78;UBERON:0007798,7.28e-10,78;UBERON:0000947,7.55e-10,21;UBERON:0010191,7.55e-10,21;UBERON:0007503,4.96e-09,78;UBERON:0002199,5.78e-09,46;UBERON:0002416,5.78e-09,46;UBERON:0007500,5.99e-09,59;UBERON:0001981,5.99e-09,59;UBERON:0004537,5.99e-09,59;UBERON:0006965,5.99e-09,59;UBERON:0004535,8.11e-09,109;UBERON:0000055,8.15e-09,68;UBERON:0002097,1.32e-08,41;UBERON:0001009,1.94e-08,112;UBERON:0000486,7.19e-08,83;UBERON:0001134,3.45e-07,62;UBERON:0002036,3.45e-07,62;UBERON:0003082,3.45e-07,62 | |||
|phase1_expression=1.63510541343501,0.214100523890983,1.12763523276777,1.0007329835313,1.34088328328186,1.74467704820074,5.06599756336621,0,0.522371256399677,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,4.95065411840187,3.31397375727916,4.03395087871065,1.20538905604795,1.46062018077475,2.43966399395253,4.55547914884115,1.42800483870977,2.82109249330279,4.29353980696585,2.05311637609326,1.88313959392204,0,0.164201178899891,0,0.393364276848904,0.767658796194425,6.81190942590734,0,0,0.369754010166788,0,0,0.880801318004542,2.76997704265939,2.60707781711184,4.77423915574874,0.223915474239924,0.32389366601898,0.77272670290256,3.63495596948912,3.02300754951048,8.00527401919793,7.67015821788759,7.81218987241469,6.81354015969228,6.04154023876516,8.70946402198942,16.7902383220896,8.27389633767885,7.10033151942209,10.8341189275473,4.70605848856512,4.09359225086769,8.31476892446813,11.9372718024652,10.9115869205872,9.59005688698562,6.59702600373432,5.38551875578406,5.54092175692502,8.9964863974861,11.3477044938228,15.5705562248894,9.2962006144995,11.9941071236646,13.9000860611275,4.23779651843358,18.0456041633907,32.2791635189702,1.26753171787165,0.637812899895131,0.419317291016752,0.336985893439485,0.150176892841506,1.44653028027372,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,1.12101712596307,0.526768169550154,0,0.786021525498329,0.205601498999509,0,0,0,0,0.668462741311041,0.294605907474837,0,2.16643091012012,0.384273959177026,0.390178042679635,1.31550323682941,1.65810010671509,0.579606171470105,0.444859689486181,0,0,0.453237370790265,0,0,0.506039384039006,0.637130828648193,0,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.802320587350522,0.434473211648397,24.3806866313962,1.34140171940727,0.255725123687061,8.67453965722959,1.00267582127178,1.88300474649071,0,0.973269740605272,4.44313640671119,2.88248216701333,2.45937399940753,0.0654895377488563,0.364295288292542,0,4.86821090482025,6.26867054277362,2.39324328933957,0.953962497221368,0.571994910780128,0.74291500265913,1.19257444420023,1.72046919021225,4.51282652089873,1.69592382577203,1.25849830862972,0.550236083880135,1.46296476575767,2.84258435086262,0.71153252537342,1.00416183829401,10.876391561947,6.84244895146661,0.976248230192678,5.8826092855339,3.24056779152704,1.87529429396568,1.12264686313085,0.225222960966644,0,0.949265659568129,1.09921046358244,0,0,0,1.49091585508596,6.58478660655815,2.64818361626438,4.01571269048339,1.77334191099179,1.68203280042692,9.60740961567345,2.22000793575444,0.622422070799533,0.67355336034844,0.980771418680752,2.27036141467397,1.15235184896,0.468642863667593,2.49728061464256,9.12754914471119,5.08125513876124,1.40921398372518,2.10434827678571,2.24721290723598,4.08308342509786,1.35117749042945,1.44656093646072,2.37600571456411,1.97813543422845,0.910161361938026,0.718618141816238,4.54507507675979,1.12606667884768,0.831192346452549,3.07284334616587,1.5324389789951,1.65261864797256,2.94923676216055,15.9656775763087,3.41691822109708,5.93409323246773,9.90300617078528,0.721367704669072,9.53269998168828,5.95573940261087,6.58227695740938,0.876933046450788,11.8643873894734,11.5982872289297,0.484938170456436,8.16522062788213,0.806016785821122,6.10418132317755,0.386521706326594,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,1.45990943630332,4.69348596989448,5.14592750554308,1.38134921352481,4.17931135228781,2.88751792667834,0.354920400119532,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,2.057870056657,0,0,0,0,0,0,0.857839051492628,1.09750285408626,0,0.100528972411631,0.462942225792648,0.977424915930974,0,1.44331342025273,2.78232971940184,1.05667824812239,4.18662698507114,1.85194205030644,1.33177906564219,0,0,2.70838706696137,1.40402559083543,1.18904929830983,0.93733833986777,0.335964256397719,0.141775097242386,0.53735113621709,0.871901815541886,0,0,0.352193736052904,7.46381215946779,10.5207565994382,5.42842463733434,0.190493682876507,0.763976851116555,0,0,0.514137463516618,1.50171528921959,0.571652865261156,0.672786506072164,0.43596006883328,0.4400297149257,1.68053230485111,0,5.917119267892,2.39344304926383,2.08014873822732,2.57207374262142,0,1.8649552531127,0.142977993658148,1.62786481617433,0,0.65147236858747,0.710783897485092,0,1.20575750823834,0.871533458600294,0.499864955910285,3.64871341923571,4.52031382288914,6.32501818449095,2.39624855491583,1.14861935834114,18.5427976552934,5.50168965336801,0.821905290201534,1.79060963239896,0.672510863961164,0.394061520403854,1.2937654491571,0.256686072559497,1.01637849688985,0,7.73288812777695,0.167516265334349,3.82763250991898,0,0,0,7.48418099486753,2.00068208423871,0.542530047399471,7.90289273817067,7.31558854068363,4.88877486605197,4.56851518471581,1.20378439891088,2.27407504055985,3.10419213877515,1.32845119707087,0.737476674166813,14.1620291582975,4.11182430671755,0,0.413536052245775,1.07857100409308,0.32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| |||
|short_description=p@chr10:17279385..17279425,+ | |||
}} |
Latest revision as of 12:18, 23 July 2015
Short description: | p@chr10:17279385..17279425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17279385..17279425, + |
Coexpression cluster: | C2999_renal_Cardiac_CD14_Chondrocyte_Myoblast_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.65e-21 | 48 |
phagocyte | 4.65e-21 | 48 |
multi fate stem cell | 1.71e-19 | 427 |
granulocyte monocyte progenitor cell | 4.85e-19 | 67 |
macrophage dendritic cell progenitor | 6.61e-19 | 61 |
somatic stem cell | 1.13e-18 | 433 |
classical monocyte | 1.31e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-18 | 42 |
monopoietic cell | 4.69e-18 | 59 |
monocyte | 4.69e-18 | 59 |
monoblast | 4.69e-18 | 59 |
promonocyte | 4.69e-18 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-17 | 66 |
stem cell | 1.64e-17 | 441 |
myeloid leukocyte | 1.34e-15 | 72 |
fibroblast | 2.10e-12 | 76 |
connective tissue cell | 6.67e-12 | 361 |
mesenchymal cell | 9.80e-11 | 354 |
motile cell | 2.47e-09 | 386 |
skin fibroblast | 5.40e-09 | 23 |
muscle precursor cell | 4.04e-07 | 58 |
myoblast | 4.04e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.04e-07 | 58 |
muscle cell | 9.06e-07 | 55 |