FFCP PHASE1:Hg19::chr10:2941535..2941541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:2941535..2941541,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr10:2941535..2941541,- | |||
|id=chr10:2941535..2941541,- | |||
|ontology_enrichment_celltype=CL:0002274!1.02e-30!5;CL:0000457!1.02e-30!5;CL:0002191!1.02e-30!5;CL:0000097!1.02e-30!5;CL:0000831!1.02e-30!5;CL:0002028!1.02e-30!5;CL:0000163!5.21e-17!9;CL:0002031!1.11e-10!124;CL:0000738!2.07e-10!140;CL:0000037!7.07e-09!172;CL:0000566!7.07e-09!172;CL:0002573!8.57e-09!2;CL:0000839!2.09e-08!70;CL:0000557!2.91e-08!71;CL:0002032!3.10e-08!165;CL:0000837!3.10e-08!165;CL:0000988!3.51e-08!182;CL:0000766!1.34e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.23e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.23e-12,25;CL:0000827,1.23e-12,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:74!4.33e-13!2;DOID:2355!1.03e-07!1;DOID:225!4.61e-07!1;DOID:1287!5.72e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.08e-08;51!DOID:0060083;4.08e-08;51!DOID:1240;7.64e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.54e-11,51;DOID:0060083,6.54e-11,51;DOID:1240,2.30e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.44e-07!115;UBERON:0002390!1.45e-07!102;UBERON:0003061!1.45e-07!102;UBERON:0002370!1.95e-07!4;UBERON:0005058!1.95e-07!4;UBERON:0009113!1.95e-07!4;UBERON:0003295!1.95e-07!4;UBERON:0005562!1.95e-07!4;UBERON:0002371!3.97e-07!80;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-66;2!UBERON:0005058;1.45e-66;2!UBERON:0009113;1.45e-66;2!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.98e-34,4;UBERON:0005058,5.98e-34,4;UBERON:0009113,5.98e-34,4;UBERON:0003295,5.98e-34,4;UBERON:0005562,5.98e-34,4;UBERON:0003351,4.86e-23,6;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000974,2.84e-14,10;UBERON:0003408,2.84e-14,10;UBERON:0001042,2.84e-14,10;UBERON:0009145,2.84e-14,10;UBERON:0006562,4.52e-13,11;UBERON:0009722,4.52e-13,11;UBERON:0007690,4.52e-13,11;UBERON:0008814,2.25e-08,18;UBERON:0001557,5.54e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20138295067864,1.91311527274587,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,2.19602293442421,2.97958628620118,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:2941535..2941541,- | |||
}} |
Latest revision as of 13:01, 23 July 2015
Short description: | p@chr10:2941535..2941541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:2941535..2941541, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.23e-12 | 25 |
pro-T cell | 1.23e-12 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.98e-34 | 4 |
hemolymphoid system gland | 5.98e-34 | 4 |
thymic region | 5.98e-34 | 4 |
pharyngeal gland | 5.98e-34 | 4 |
thymus primordium | 5.98e-34 | 4 |
pharyngeal epithelium | 4.86e-23 | 6 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
neck | 2.84e-14 | 10 |
gland of gut | 2.84e-14 | 10 |
chordate pharynx | 2.84e-14 | 10 |
pharyngeal region of foregut | 2.84e-14 | 10 |
pharynx | 4.52e-13 | 11 |
entire pharyngeal arch endoderm | 4.52e-13 | 11 |
early pharyngeal endoderm | 4.52e-13 | 11 |
pharyngeal arch system | 2.25e-08 | 18 |
upper respiratory tract | 5.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.54e-11 | 51 |
immune system cancer | 6.54e-11 | 51 |
leukemia | 2.30e-08 | 39 |