FFCP PHASE1:Hg19::chr11:61584233..61584244,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000424501_5end | |||
|cluster_id=chr11:61584233..61584244,- | |||
|description=CAGE_peak_8_at_FADS1_5end | |||
|id=chr11:61584233..61584244,- | |||
|ontology_enrichment_celltype=CL:0000133!1.69e-12!59;CL:0002319!2.35e-11!25;CL:0000333!5.07e-11!41;CL:0000221!2.94e-10!71;CL:0002321!2.73e-08!248;CL:0000095!4.96e-08!17;CL:0000123!4.96e-08!17;CL:0000220!7.33e-08!246;CL:0000243!1.93e-07!15;CL:0000125!1.93e-07!15;CL:0000030!1.93e-07!15;CL:0000339!1.93e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.62e-14;25!CL:0000095;3.73e-09;17!CL:0000243;2.80e-08;15!CL:0000125;2.80e-08;15!CL:0000147;4.97e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.13e-15,59;CL:0002319,9.18e-14,25;CL:0000333,2.19e-13,41;CL:0000221,3.03e-10,72;CL:0000095,3.45e-09,17;CL:0000123,3.45e-09,17;CL:0000243,2.31e-08,15;CL:0000125,2.31e-08,15;CL:0000030,2.31e-08,15;CL:0000339,2.31e-08,15;CL:0000147,2.68e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000339;2.80e-08;15!CL:0000133;4.05e-08;59 | |||
|ontology_enrichment_disease=DOID:0050687!2.61e-08!143;DOID:162!1.48e-07!235;DOID:14566!2.46e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.12e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.79e-22!94;UBERON:0001016!5.79e-22!94;UBERON:0005743!2.30e-20!86;UBERON:0001017!3.55e-18!82;UBERON:0000924!3.47e-17!173;UBERON:0006601!3.47e-17!173;UBERON:0004121!1.47e-16!169;UBERON:0002346!1.10e-15!90;UBERON:0003075!4.11e-15!86;UBERON:0007284!4.11e-15!86;UBERON:0000955!9.53e-14!69;UBERON:0006238!9.53e-14!69;UBERON:0000033!1.34e-13!123;UBERON:0000119!1.53e-13!312;UBERON:0000483!1.29e-12!309;UBERON:0003056!7.41e-12!61;UBERON:0000153!1.40e-11!129;UBERON:0007811!1.40e-11!129;UBERON:0000475!6.40e-11!365;UBERON:0002616!1.11e-10!59;UBERON:0000481!1.76e-10!347;UBERON:0000064!5.02e-10!219;UBERON:0001049!6.15e-10!57;UBERON:0005068!6.15e-10!57;UBERON:0006241!6.15e-10!57;UBERON:0007135!6.15e-10!57;UBERON:0000477!4.82e-09!286;UBERON:0000922!1.05e-08!612;UBERON:0000025!3.15e-08!194;UBERON:0001893!4.95e-08!34;UBERON:0002020!7.96e-08!34;UBERON:0003528!7.96e-08!34;UBERON:0002791!1.13e-07!33;UBERON:0001869!1.32e-07!32;UBERON:0002050!1.59e-07!605;UBERON:0005423!1.59e-07!605;UBERON:0000970!2.16e-07!20;UBERON:0000923!2.21e-07!604;UBERON:0005291!2.21e-07!604;UBERON:0006598!2.21e-07!604;UBERON:0002532!2.21e-07!604;UBERON:0000019!3.20e-07!19;UBERON:0000047!3.20e-07!19;UBERON:0004088!3.20e-07!19;UBERON:0003072!3.20e-07!19;UBERON:0003071!3.20e-07!19;UBERON:0004128!3.20e-07!19;UBERON:0002780!4.74e-07!41;UBERON:0001890!4.74e-07!41;UBERON:0006240!4.74e-07!41;UBERON:0007625!8.80e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;5.19e-09;20!UBERON:0007625;7.34e-09;11!UBERON:0000019;9.90e-09;19!UBERON:0000047;9.90e-09;19!UBERON:0004088;9.90e-09;19!UBERON:0010230;9.90e-09;19!UBERON:0002104;2.67e-08;21!UBERON:0006876;8.41e-08;11!UBERON:0001456;2.25e-07;21!UBERON:0000020;4.38e-07;23!UBERON:0001017;4.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.44e-20,89;UBERON:0001017,4.67e-19,81;UBERON:0004121,9.73e-15,171;UBERON:0000924,9.73e-15,171;UBERON:0006601,9.73e-15,171;UBERON:0000955,1.46e-13,68;UBERON:0006238,1.46e-13,68;UBERON:0011216,3.89e-13,223;UBERON:0002346,2.77e-12,86;UBERON:0003075,2.85e-12,82;UBERON:0007284,2.85e-12,82;UBERON:0003056,4.39e-10,61;UBERON:0010314,1.65e-09,132;UBERON:0007625,7.30e-09,11;UBERON:0001049,1.59e-08,56;UBERON:0005068,1.59e-08,56;UBERON:0006241,1.59e-08,56;UBERON:0007135,1.59e-08,56;UBERON:0010371,2.48e-08,104;UBERON:0000119,2.65e-08,309;UBERON:0006876,3.27e-08,11;UBERON:0000970,3.41e-08,21;UBERON:0002104,3.41e-08,21;UBERON:0000019,6.12e-08,20;UBERON:0000047,6.12e-08,20;UBERON:0010312,6.12e-08,20;UBERON:0004088,6.12e-08,20;UBERON:0010230,6.12e-08,20;UBERON:0003072,6.12e-08,20;UBERON:0004128,6.12e-08,20;UBERON:0003071,6.12e-08,20;UBERON:0000483,1.83e-07,306;UBERON:0000073,3.56e-07,53;UBERON:0002616,3.56e-07,53;UBERON:0001456,9.77e-07,22 | |||
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| |||
|short_description=p8@FADS1 | |||
}} |
Latest revision as of 17:06, 18 September 2015
Short description: | p8@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424501_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.13e-15 | 59 |
neural cell | 9.18e-14 | 25 |
migratory neural crest cell | 2.19e-13 | 41 |
ectodermal cell | 3.03e-10 | 72 |
neuron associated cell | 3.45e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.45e-09 | 17 |
glial cell (sensu Vertebrata) | 2.31e-08 | 15 |
glial cell | 2.31e-08 | 15 |
glioblast | 2.31e-08 | 15 |
glioblast (sensu Vertebrata) | 2.31e-08 | 15 |
pigment cell | 2.68e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.44e-20 | 89 |
central nervous system | 4.67e-19 | 81 |
ectoderm-derived structure | 9.73e-15 | 171 |
ectoderm | 9.73e-15 | 171 |
presumptive ectoderm | 9.73e-15 | 171 |
brain | 1.46e-13 | 68 |
future brain | 1.46e-13 | 68 |
organ system subdivision | 3.89e-13 | 223 |
neurectoderm | 2.77e-12 | 86 |
neural plate | 2.85e-12 | 82 |
presumptive neural plate | 2.85e-12 | 82 |
pre-chordal neural plate | 4.39e-10 | 61 |
structure with developmental contribution from neural crest | 1.65e-09 | 132 |
pigment epithelium of eye | 7.30e-09 | 11 |
neural tube | 1.59e-08 | 56 |
neural rod | 1.59e-08 | 56 |
future spinal cord | 1.59e-08 | 56 |
neural keel | 1.59e-08 | 56 |
ecto-epithelium | 2.48e-08 | 104 |
cell layer | 2.65e-08 | 309 |
vasculature of organ | 3.27e-08 | 11 |
eye | 3.41e-08 | 21 |
visual system | 3.41e-08 | 21 |
camera-type eye | 6.12e-08 | 20 |
simple eye | 6.12e-08 | 20 |
immature eye | 6.12e-08 | 20 |
ocular region | 6.12e-08 | 20 |
eyeball of camera-type eye | 6.12e-08 | 20 |
optic cup | 6.12e-08 | 20 |
optic vesicle | 6.12e-08 | 20 |
eye primordium | 6.12e-08 | 20 |
epithelium | 1.83e-07 | 306 |
regional part of nervous system | 3.56e-07 | 53 |
regional part of brain | 3.56e-07 | 53 |
face | 9.77e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.12e-07 | 143 |