FFCP PHASE1:Hg19::chr11:77185029..77185043,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000278568_5end | |||
|cluster_id=chr11:77185029..77185043,- | |||
|coexpression_cluster_id=C3203 | |||
|description=CAGE_peak_9_at_PAK1_5end | |||
|id=chr11:77185029..77185043,- | |||
|ontology_enrichment_celltype=CL:0002319!4.26e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.33e-11;7!CL:0000586;1.33e-11;7!CL:0002322;6.80e-10;5!CL:0000163;7.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.43e-12,7;CL:0000586,3.43e-12,7;CL:0002322,6.89e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.42e-07;10!UBERON:0005564;1.42e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.46e-10!143;DOID:305!4.34e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.90e-08;22!DOID:2994;3.90e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.56e-08,143;DOID:3095,1.60e-08,22;DOID:2994,1.60e-08,22;DOID:305,4.46e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.24e-21!86;UBERON:0000073!4.38e-21!94;UBERON:0001016!4.38e-21!94;UBERON:0001017!8.72e-21!82;UBERON:0000955!1.28e-17!69;UBERON:0006238!1.28e-17!69;UBERON:0001049!2.88e-16!57;UBERON:0005068!2.88e-16!57;UBERON:0006241!2.88e-16!57;UBERON:0007135!2.88e-16!57;UBERON:0002616!1.58e-15!59;UBERON:0003075!5.37e-15!86;UBERON:0007284!5.37e-15!86;UBERON:0002346!8.00e-15!90;UBERON:0001893!2.20e-13!34;UBERON:0000924!3.74e-13!173;UBERON:0006601!3.74e-13!173;UBERON:0004121!4.19e-13!169;UBERON:0002791!6.37e-13!33;UBERON:0002020!7.45e-13!34;UBERON:0003528!7.45e-13!34;UBERON:0001869!8.81e-13!32;UBERON:0000153!1.44e-12!129;UBERON:0007811!1.44e-12!129;UBERON:0002780!1.73e-12!41;UBERON:0001890!1.73e-12!41;UBERON:0006240!1.73e-12!41;UBERON:0000033!1.95e-12!123;UBERON:0003056!6.47e-12!61;UBERON:0003080!8.05e-12!42;UBERON:0000956!8.14e-12!25;UBERON:0000203!8.14e-12!25;UBERON:0002619!4.05e-11!22;UBERON:0000062!7.03e-11!511;UBERON:0001950!1.97e-10!20;UBERON:0007023!2.68e-09!115;UBERON:0000922!3.31e-09!612;UBERON:0000064!6.97e-08!219;UBERON:0005409!7.27e-08!35;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.81e-07!605;UBERON:0005423!1.81e-07!605;UBERON:0000464!7.19e-07!104;UBERON:0005177!8.83e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.62e-10;49!UBERON:0001893;2.38e-09;34!UBERON:0001869;3.87e-09;32!UBERON:0002791;1.12e-08;32!UBERON:0003528;1.26e-08;34!UBERON:0002020;1.26e-08;34!UBERON:0000956;1.60e-08;25!UBERON:0000203;1.60e-08;25!UBERON:0002619;1.77e-08;22!UBERON:0001950;3.77e-08;20!UBERON:0000073;4.88e-08;53!UBERON:0002616;4.88e-08;53!UBERON:0002780;7.37e-08;41!UBERON:0001890;7.37e-08;41!UBERON:0001871;7.83e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.98e-12,81;UBERON:0001016,8.30e-12,89;UBERON:0001049,1.87e-11,56;UBERON:0005068,1.87e-11,56;UBERON:0006241,1.87e-11,56;UBERON:0007135,1.87e-11,56;UBERON:0000073,2.36e-11,53;UBERON:0002616,2.36e-11,53;UBERON:0001893,3.76e-10,34;UBERON:0001869,7.71e-10,32;UBERON:0002780,9.83e-10,41;UBERON:0001890,9.83e-10,41;UBERON:0003080,9.83e-10,41;UBERON:0006240,9.83e-10,41;UBERON:0000955,1.12e-09,68;UBERON:0006238,1.12e-09,68;UBERON:0003528,4.74e-09,34;UBERON:0002020,4.74e-09,34;UBERON:0002791,1.11e-08,32;UBERON:0000956,3.28e-08,25;UBERON:0000203,3.28e-08,25;UBERON:0002619,3.72e-08,22;UBERON:0001950,6.20e-08,20;UBERON:0011216,7.57e-08,223;UBERON:0001871,8.16e-08,6;UBERON:0003075,4.77e-07,82;UBERON:0007284,4.77e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0.247532705920093,0,0,0,0,0,2.46242116153576,1.63200552995402,0.940364164434263,2.28988789704845,0.547497700291537,0.376627918784408,2.75088260692625,1.9704141467987,2.51874500203774,0.393364276848904,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0,0,0.464858073811369,1.23350366406548,0.309706370895104,0.575384784644301,0,0.236482229888585,0,1.29096936716765,0,0.376484679085209,0.272906150057846,0,0.612167784741805,1.92557416245656,1.91801137739712,0,0,0,0.290209238628584,1.13477044938228,1.24564449799115,0.251248665256743,0,0.434377689410233,0,1.47311054395026,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0.945348171640679,0.665188192387692,0.527008714158756,0.523916301990851,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.286804595389004,7.44039607390532,5.4337205011809,7.78499417225773,3.93912009058408,6.05570042101508,2.18986415445498,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,1.59884970106048,0,0.98775256867763,0,0.603173834469785,0.185176890317059,0,0,0,1.04337364477569,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.179117045405697,0,0,1.97065295158377,1.05658120815871,1.03664057770386,1.00883967391873,0.50496973370552,0,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,1.30788020649984,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0.76228387266739,1.30139853857622,0,0.502548796003046,0.637938751653163,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0.426910231213777,0,0,0.907170879989041,0,0,0,0.128139149255701,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.483437798366489,0.802025881213139,0.460404944679482,0,0,0.131124414959424,1.35359883872224,0.693138033939733,2.35304930753057,0,0.316654886678627,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,1.01950509218015,0.831076008928724,0.447749509444357,0.219259876645935,0.261435451024901,0.256450125116389,0.984043937099117,0.325378394664303,0.103041011647722,0.824125183365091,1.15513299888823,1.72279661398852,0,0,0.48335359146061,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.511359764496605,0.267096106940212,0.165284915360978,0.192190067365106,0.638063562472921,0.910420027699949,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0.274537029736055,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.564862804660675,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,1.38871292465715,0,1.96032172784825,0,0,0.711418433484141,0.478278818186467,0,0,0,0.324621940274555,0,0.912938716132769,0,0,0,0,0.201799707191048,0.851692475380653,0.687010689511529,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0,0,0,1.68426486367398,0,0,0,1.13654458722565,0.23874448473769,0,0,0.994147647766298,1.1253553312841,0.445234820091624,0,0.211125408127993,0.19924798825107,1.38141957765574,1.0077309914171,0.20453736500431,1.35393286007176,0,0.359473404589307,0,0,0.493217028184668,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0.682760689712998,2.2882828526349,0,2.06846023944879,0.291604613383254,1.56262495439963,0,1.08536794762867,3.05163472634166,0.663475559587348,0.886642856860642,1.31631238292384,0,0.557694977114413,0.692552326534174,0,1.61394733071642,4.21860928725929,1.95565269459615,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,1.14262965711403,1.83758992864123,0.649165919226273,0,0.619202951523374,2.4441205797345,0,0.123563938946503,0,1.21322039365219,0,0.468528891450678,0,1.17398771359254,0.242780379534093,0.394584402849391,2.41981432097328,3.67287313956588,0.31593289814244,1.80388103297391,1.14057010536972,1.99396161812156,0.661983911750998,0.313932918407225,1.19472429772959,0,0,0.520679215005393,0.195984794828755,2.00236175134926,0.52418000472609,0,0,0,0,0.581934098930517,0.617792886840502,0,0,0.19871461170299,0.696418755514666,0.195551382734803,4.32857629358282,1.28071796843612,0,2.16135625731159,0.572682980829578,0.686379991447858,0,0.248505071130865,0.235694034616795,0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| |||
|short_description=p9@PAK1 | |||
}} |
Latest revision as of 14:00, 24 September 2015
Short description: | p9@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAK1_5end |
Coexpression cluster: | C3203_testicular_Mast_H9_Eosinophils_iPS_immature_gall |
Association with transcript: | 61bp_to_ENST00000278568_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.43e-12 | 7 |
germ cell | 3.43e-12 | 7 |
embryonic stem cell | 6.89e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.98e-12 | 81 |
nervous system | 8.30e-12 | 89 |
neural tube | 1.87e-11 | 56 |
neural rod | 1.87e-11 | 56 |
future spinal cord | 1.87e-11 | 56 |
neural keel | 1.87e-11 | 56 |
regional part of nervous system | 2.36e-11 | 53 |
regional part of brain | 2.36e-11 | 53 |
telencephalon | 3.76e-10 | 34 |
cerebral hemisphere | 7.71e-10 | 32 |
regional part of forebrain | 9.83e-10 | 41 |
forebrain | 9.83e-10 | 41 |
anterior neural tube | 9.83e-10 | 41 |
future forebrain | 9.83e-10 | 41 |
brain | 1.12e-09 | 68 |
future brain | 1.12e-09 | 68 |
brain grey matter | 4.74e-09 | 34 |
gray matter | 4.74e-09 | 34 |
regional part of telencephalon | 1.11e-08 | 32 |
cerebral cortex | 3.28e-08 | 25 |
pallium | 3.28e-08 | 25 |
regional part of cerebral cortex | 3.72e-08 | 22 |
neocortex | 6.20e-08 | 20 |
organ system subdivision | 7.57e-08 | 223 |
temporal lobe | 8.16e-08 | 6 |
neural plate | 4.77e-07 | 82 |
presumptive neural plate | 4.77e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.56e-08 | 143 |
germ cell and embryonal cancer | 1.60e-08 | 22 |
germ cell cancer | 1.60e-08 | 22 |
carcinoma | 4.46e-08 | 106 |