FFCP PHASE1:Hg19::chr12:109040799..109040822,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:109040799..109040822,- | |||
|description=CAGE_peak_at_chr12:109040799..109040822,- | |||
|id=chr12:109040799..109040822,- | |||
|ontology_enrichment_celltype=CL:0002009!6.76e-15!65;CL:0002194!3.61e-14!63;CL:0000576!3.61e-14!63;CL:0000040!3.61e-14!63;CL:0000559!3.61e-14!63;CL:0000557!7.89e-12!71;CL:0000839!1.76e-11!70;CL:0002057!1.61e-10!42;CL:0000860!2.92e-10!45;CL:0000766!4.16e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.29e-22;39!CL:0000234;6.29e-22;39!CL:0000860;4.41e-19;33!CL:0002057;4.41e-19;33!CL:0000235;3.33e-09;6!CL:0000576;1.50e-07;48!CL:0000766;2.73e-07;69!CL:0002539;3.24e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.50e-22,59;CL:0000576,8.50e-22,59;CL:0000040,8.50e-22,59;CL:0000559,8.50e-22,59;CL:0000473,2.70e-21,48;CL:0000234,2.70e-21,48;CL:0002009,8.17e-21,61;CL:0000839,1.27e-18,66;CL:0000557,3.19e-18,67;CL:0000766,2.13e-16,72;CL:0000860,5.46e-15,42;CL:0002057,5.46e-15,42;CL:0000763,6.40e-10,108;CL:0000049,6.40e-10,108;CL:0000235,1.58e-09,6;CL:0000048,2.40e-08,427;CL:0002087,3.92e-08,115;CL:0000723,5.42e-08,433;CL:0000034,1.54e-07,441;CL:0002031,1.70e-07,120;CL:0002539,3.24e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;8.97e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.80e-07;3!DOID:127;1.80e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.22e-07,3;DOID:127,1.22e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.92e-13!167;UBERON:0002371!1.54e-11!80;UBERON:0004765!7.90e-11!101;UBERON:0001434!7.90e-11!101;UBERON:0001474!1.73e-10!86;UBERON:0002405!5.25e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.24e-07;10!UBERON:0004695;3.24e-07;10!UBERON:0002111;3.24e-07;10!UBERON:0004178;3.24e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-17,76;UBERON:0001474,1.03e-15,82;UBERON:0002405,3.86e-15,93;UBERON:0002204,9.28e-15,167;UBERON:0004765,1.43e-13,90;UBERON:0002193,8.13e-12,108;UBERON:0002390,8.57e-12,98;UBERON:0003061,8.57e-12,98;UBERON:0000926,1.46e-11,315;UBERON:0004120,1.46e-11,315;UBERON:0006603,1.46e-11,315;UBERON:0001434,2.14e-11,100;UBERON:0003081,6.12e-10,203;UBERON:0004237,3.24e-07,10;UBERON:0004695,3.24e-07,10;UBERON:0002111,3.24e-07,10;UBERON:0004178,3.24e-07,10 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.281908808191942,4.00293193412522,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0,0.655324116390517,0,0.247532705920093,0.662794751455832,1.34465029290355,0,1.46062018077475,2.43966399395253,0.61560529038394,0,0,0,1.09499540058307,0.627713197974014,0.229240217243854,0.164201178899891,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0,0,0,0.284338464974843,0,0.553995408531877,0,0.651032612147555,0.671746422719773,0.971680998056939,0,1.74477886535478,1.13362783106643,1.21292030593908,1.62700325833979,1.6446715520873,2.78735733805593,0.575384784644301,1.0246428261164,1.18241114944293,0.344745680736619,2.5819387343353,2.70852973188684,3.57660445130949,0.272906150057846,1.57306439111559,3.67300670845083,0.320929027076094,5.11469700639233,0.659702600373432,0.598390972864896,0.852449501065388,3.77272010217159,0.56738522469114,1.24564449799115,2.00998932205395,0,0.217188844705117,1.81619850790011,1.10483290796269,1.58231193720442,0.422510572623884,0.212604299965044,0,0,0.450530678524519,0.48217676009124,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.383587685530591,1.0843174571537,0,0.724232594804119,0,0,0.283604451492204,0.221729397462564,0.527008714158756,0.130979075497713,0,0,1.9472843619281,1.0447784237956,0.664789802594326,1.19245312152671,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.264818361626438,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.597794722207204,0.117434498643765,1.45685649931318,0.702254033511242,0.204154171254893,0.982674538494144,0,0,0.741800787835671,0,0,0.673344455816265,0.250237039743928,0,0.438977620880838,0.919463387397059,0.45071417671979,1.24775401476023,0.358779271377724,0,0.211931901159562,0,0.515262646192195,0.257640540045629,0.37223371266318,0.506328996723799,0,0.252433774244115,0.368199594569197,0.161646056818812,0,0.806016785821122,1.52604533079439,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,1.38134921352481,1.39310378409594,1.44375896333917,0.236613600079688,0.674338760312407,0.241011029883482,0,0.217879444092406,0,0.808987848960987,0.784885860501384,0.769494313892781,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0.201057944823262,0.185176890317059,0.977424915930974,0,0,0.695582429850461,0.234817388471643,0.288732895522148,2.31492756288305,1.33177906564219,0,0,1.72351904261178,1.63802985597466,0.594524649154913,0.93733833986777,0.16798212819886,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0.176096868026452,0,0,0,0.317489471460845,0,0,1.71072446022705,0.822619941626588,0.901029173531752,0.285826432630578,0.112131084345361,0,0.22001485746285,0.904902010304444,0,0.845302752556,0.797814349754612,1.04007436911366,0.771622122786426,1.41849132023278,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0.710783897485092,1.58390374586686,1.50719688529793,0,0.399891964728228,2.43247561282381,2.00902836572851,6.32501818449095,0,0,0,1.59259437334337,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0.837581326671744,1.27587750330633,0,0,0,0.24538298343828,0,0.542530047399471,0.207970861530807,2.3195768543631,0.946214490203608,0,0.300946099727719,0,0,0,0.553107505625109,0.781952530212746,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.61384789315225,1.12264037773229,0.512556597022804,1.02341449813341,1.93024705372329,1.48418066444991,1.3878872442239,0.887808626565635,0.492762936082855,0.519254429183621,2.44041794765914,0.362578348774867,1.00253235151642,0.368323955743585,1.14814448164607,0.182091168006717,0.131124414959424,0,0.847168708148562,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.895499018888713,0,0.784306353074702,0.512900250232778,0,0.976135183992909,0.515205058238611,0.457847324091717,0.330037999682352,0,0.650060246036521,0,0.290012154876366,1.23238893691716,0.767518373630648,0.689182862422653,0.537101224341368,0.145016693914229,0.0852266274161009,0.534192213880424,0.330569830721956,0.576570202095319,0.255225424989168,0.4046311234222,1.39453664789186,0,0.6970372701606,2.46426864140871,2.12922412126809,0,0.9266210955196,0.143124886741991,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.589062011728432,0.202182481573316,4.75530963519025,2.10629228119491,0,2.19342140668156,0,0.682499557039929,0.565621727814851,0,0,0,1.31535265576129,0,1.31178950409327,0.202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| |||
|short_description=p@chr12:109040799..109040822,- | |||
}} |
Latest revision as of 04:39, 24 July 2015
Short description: | p@chr12:109040799..109040822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109040799..109040822, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.50e-22 | 59 |
monocyte | 8.50e-22 | 59 |
monoblast | 8.50e-22 | 59 |
promonocyte | 8.50e-22 | 59 |
defensive cell | 2.70e-21 | 48 |
phagocyte | 2.70e-21 | 48 |
macrophage dendritic cell progenitor | 8.17e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.27e-18 | 66 |
granulocyte monocyte progenitor cell | 3.19e-18 | 67 |
myeloid leukocyte | 2.13e-16 | 72 |
classical monocyte | 5.46e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.46e-15 | 42 |
myeloid cell | 6.40e-10 | 108 |
common myeloid progenitor | 6.40e-10 | 108 |
macrophage | 1.58e-09 | 6 |
multi fate stem cell | 2.40e-08 | 427 |
nongranular leukocyte | 3.92e-08 | 115 |
somatic stem cell | 5.42e-08 | 433 |
stem cell | 1.54e-07 | 441 |
hematopoietic lineage restricted progenitor cell | 1.70e-07 | 120 |
aortic smooth muscle cell | 3.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-17 | 76 |
bone element | 1.03e-15 | 82 |
immune system | 3.86e-15 | 93 |
musculoskeletal system | 9.28e-15 | 167 |
skeletal element | 1.43e-13 | 90 |
hemolymphoid system | 8.13e-12 | 108 |
hematopoietic system | 8.57e-12 | 98 |
blood island | 8.57e-12 | 98 |
mesoderm | 1.46e-11 | 315 |
mesoderm-derived structure | 1.46e-11 | 315 |
presumptive mesoderm | 1.46e-11 | 315 |
skeletal system | 2.14e-11 | 100 |
lateral plate mesoderm | 6.12e-10 | 203 |
blood vessel smooth muscle | 3.24e-07 | 10 |
arterial system smooth muscle | 3.24e-07 | 10 |
artery smooth muscle tissue | 3.24e-07 | 10 |
aorta smooth muscle tissue | 3.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.22e-07 | 3 |
leiomyoma | 1.22e-07 | 3 |