FFCP PHASE1:Hg19::chr12:54394416..54394467,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5130 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N561 | |||
|association_with_transcript=441bp_to_BC032769_5end | |||
|cluster_id=chr12:54394416..54394467,+ | |||
|description=CAGE_peak_5_at_HOXC9_5end | |||
|id=chr12:54394416..54394467,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.65e-10!15;CL:0002334!2.23e-10!12;CL:0000055!1.35e-09!180;CL:0000325!6.08e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.36e-17;12!CL:0000136;2.34e-11;13!CL:0002570;1.18e-07;8!CL:0002615;2.15e-07;3!CL:0002580;4.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.06e-17,12;CL:0000136,2.07e-14,15;CL:0002570,1.76e-07,8;CL:0002615,2.25e-07,3;CL:0000057,3.42e-07,76;CL:0002580,4.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.85e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.08e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.30e-09!45;UBERON:0002416!6.30e-09!45;UBERON:0002097!1.09e-07!40;UBERON:0001013!3.77e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.75e-16;9!UBERON:0000042;4.75e-16;9!UBERON:0003688;4.23e-12;6!UBERON:0002358;4.23e-12;6!UBERON:0003684;4.23e-12;6!UBERON:0001178;4.23e-12;6!UBERON:0001013;5.58e-09;14!UBERON:0004905;2.54e-07;8!UBERON:0000982;2.54e-07;8!UBERON:0004770;2.54e-07;8!UBERON:0000310;3.91e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.47e-12,6;UBERON:0002358,3.47e-12,6;UBERON:0003684,3.47e-12,6;UBERON:0001178,3.47e-12,6;UBERON:0004457,9.03e-12,12;UBERON:0000042,9.03e-12,12;UBERON:0001013,5.96e-09,14;UBERON:0004905,2.04e-07,8;UBERON:0000982,2.04e-07,8;UBERON:0004770,2.04e-07,8;UBERON:0000310,4.45e-07,10 | |||
|phase1_expression=8.17552706717505,3.42560838225573,4.65149533516705,7.00513088471913,4.02264984984559,6.10636966870258,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.37129905888014,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,1.01392563272577,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.732806975721629,0,0,0,1.98788780678127,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.704606991862589,0.971237666208789,1.12360645361799,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.640672166455702,1.05965950579781,0.900273288253207,1.64884046781502,1.28820270022815,0.744467425326359,1.5189869901714,2.82567314967476,0.504867548488229,1.56484827691909,0,0,1.0075209822764,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,4.33127689001751,0.236613600079688,0,0,0.110293972732394,0.653638332277218,0.474541238222193,0.269662616320329,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,1.61205340865127,1.45316969256981,1.53353071666084,0,0,0,0.144119953416961,0.37872730027914,4.69884417762051,3.4378958300245,1.17217447210047,1.71072446022705,4.31875469353959,3.60411669412701,0.857479297891735,0,0,0,1.68053230485111,3.57656445851882,0,0,0,2.57207374262142,4.25547396069835,2.1313774321288,0,1.08524321078289,0,0.65147236858747,0,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,0,2.60606352001643,1.84928690295345,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,2.50085260529839,1.35632511849868,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0,3.2254015016441,3.37616341233737,3.92924132206303,2.43464383585832,2.04682899626681,1.60853921143608,1.48418066444991,1.23367755042124,1.59805552781814,2.21743321237285,0.519254429183621,2.09178681227927,0.120859449591622,0.200506470303285,0,0,0,0,0,0.616122696835318,0.784349769176855,0,0.633309773357254,0,0,0.647747748306418,1.54227252690289,1.35473218771926,0,0.764628819135115,1.66215201785745,0.671624264166535,0,0,0,0,0,0.103041011647722,0.183138929636687,0.330037999682352,1.72279661398852,1.30012049207304,1.6068392984416,0.773365746336976,0.308097234229289,0.460511024178389,0.689182862422653,1.18162269355101,0.870100163485371,0.93749290157711,1.4245125703478,0,0,0,0,1.39453664789186,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,1.70599442741899,2.11300293513511,0,0,0,0.551365343546124,0,0,0,0,0.811641507850816,0.92947049429925,0.563391205064483,1.00387946542836,0.491245205065606,0.35667105148125,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.0941438007767792,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0.242721043499027,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0,0,0,0,4.44547960578548,0,0,0,2.08342208868187,0.0874599999961957,0.724999575434793,0,0,0,0.689486746482929,0.291604613383254,0.868124974666461,0,0,0,0,0,0,0.21787692703798,0,0,0,0.69169171316418,0.0897576444097721,0.869178975376065,0,0.183195186803725,0,0,0,0,0.451191321234361,0,0.167821586975843,0.569261198172555,0,0,0,0,0,0,0,0,0,0.494255755786011,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.518440956986236,0,0,0.313932918407225,0,0,0.416024019039416,0,0,0.522355239482415,0.698906672968121,0.343972064943233,0.580537987734511,0.0730893170861856,0.656923656425674,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0.407712618220842,0.627617077873999,0.203996435272644,0,0,0,0,1.28929632425987,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0.551639951094387,0.734364233889974,0,0.179287339332845,0.383830394638891,0,0,0.25426853765475,1.08599920350743,0,0.326587360109409,0,0,2.21504428321048,0.453248366080503,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0.544017803369474,1.7548292581589,1.53172788381731,2.95085367638824,1.09937867375164,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0.856396000634902,0,0,0.144921028610825,1.34329322598187,1.40227985908335,1.10961172300523,0.757612021100357,0.50313580350515,2.66943366478961,0,0,0.310874401165561,0,1.27437413730962,0.449803112163605,0.776314784381297,1.65882483136342,4.25346743292792,1.5652351854352,0.450772826991655,1.14241563650639,1.22061219961398,1.09109195521536,0.214821114084977,1.39210127963548,1.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| |||
|short_description=p5@HOXC9 | |||
}} |
Latest revision as of 04:48, 19 September 2015
Short description: | p5@HOXC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 441bp_to_BC032769_5end |
EntrezGene: | HOXC9 |
HGNC: | 5130 |
UniProt: | Q8N561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.06e-17 | 12 |
fat cell | 2.07e-14 | 15 |
mesenchymal stem cell of adipose | 1.76e-07 | 8 |
adipocyte of omentum tissue | 2.25e-07 | 3 |
fibroblast | 3.42e-07 | 76 |
preadipocyte of the breast | 4.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.47e-12 | 6 |
peritoneum | 3.47e-12 | 6 |
abdominal cavity | 3.47e-12 | 6 |
visceral peritoneum | 3.47e-12 | 6 |
cavity lining | 9.03e-12 | 12 |
serous membrane | 9.03e-12 | 12 |
adipose tissue | 5.96e-09 | 14 |
articulation | 2.04e-07 | 8 |
skeletal joint | 2.04e-07 | 8 |
articular system | 2.04e-07 | 8 |
breast | 4.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.08e-08 | 14 |