FFCP PHASE1:Hg19::chr12:56386775..56386789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:56386775..56386789,+ | |||
|description=CAGE_peak_at_chr12:56386775..56386789,+ | |||
|id=chr12:56386775..56386789,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.22e-10;3!CL:0000511;3.44e-08;1!CL:0002625;3.44e-08;1!CL:0000222;3.44e-08;1!CL:0000216;3.44e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.11e-10,3;CL:0000511,2.50e-08,1;CL:0002625,2.50e-08,1;CL:0000216,2.50e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.44e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.30e-10;3!DOID:127;4.30e-10;3!DOID:0060072;8.81e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.25e-10,3;DOID:127,2.25e-10,3;DOID:0060072,5.45e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.44e-08;1!UBERON:0001136;3.44e-08;1!UBERON:0001343;3.44e-08;1!UBERON:0004910;3.44e-08;1!UBERON:0004813;3.44e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.50e-08,1;UBERON:0001343,2.50e-08,1;UBERON:0004910,2.50e-08,1;UBERON:0005154,2.50e-08,1;UBERON:0005295,2.50e-08,1;UBERON:0004813,2.50e-08,1;UBERON:0005297,2.50e-08,1;UBERON:0005294,2.50e-08,1;UBERON:0010141,2.50e-08,1;UBERON:0005891,2.50e-08,1;UBERON:0002079,2.89e-08,1 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,2.00146596706261,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0,0,0,0,0,1.95173119516203,0,0.612002073732759,0,0,0.410623275218653,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.6024118375565,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0,0,1.94826728407911,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.506039384039006,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0.50133791063589,0.579386075843295,0,0,0,1.10864698731282,0.351339142772504,0.523916301990851,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.476981248610684,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0.258416759169329,0,0,1.20848795132744,0.760272105718513,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0.269421344139376,0,0.302714855289863,0,0,0.624320153660641,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.226864366320042,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0,0,0,0.389748020644795,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0,0,0.643240938192885,0,0.928735856063958,0,0.354920400119532,0.505754070234305,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,1.1240175325762,0,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.445893486866185,0,0.16798212819886,0,0.179117045405697,0,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.224262168690721,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,6.32501818449095,0,0,0,0.579125226670317,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,2.24702107184155,2.99161459204025,0,0.24538298343828,1.00034104211935,0.542530047399471,0.623912584592421,0.713715955188647,0.473107245101804,0.234282829985426,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.512556597022804,0.511707249066704,0.965123526861645,0,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0.483437798366489,1.20303882181971,0.368323955743585,0,0.546273504020151,1.04899531967539,0,0,0,0,0.211103257785751,1.13733384070897,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.27470839445503,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0.145016693914229,0.255679882248303,0.267096106940212,0,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.445773537109913,0,0,0.890894042497916,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0.211125408127993,0.597743964753209,0,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.394573622547734,0,0,0.969332746095218,0.463840490809256,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0.482385754501632,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0.230850775511391,0.227884111694002,0,0,0.434589487688032,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0,0.182454789215666,0,0,0.78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| |||
|short_description=p@chr12:56386775..56386789,+ | |||
}} |
Latest revision as of 10:17, 24 July 2015
Short description: | p@chr12:56386775..56386789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56386775..56386789, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.11e-10 | 3 |
androgen binding protein secreting cell | 2.50e-08 | 1 |
seminiferous tubule epithelial cell | 2.50e-08 | 1 |
Sertoli cell | 2.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.50e-08 | 1 |
seminiferous tubule of testis | 2.50e-08 | 1 |
epithelium of male gonad | 2.50e-08 | 1 |
epithelial cord | 2.50e-08 | 1 |
sex cord | 2.50e-08 | 1 |
seminiferous tubule epithelium | 2.50e-08 | 1 |
testis sex cord | 2.50e-08 | 1 |
genital ridge | 2.50e-08 | 1 |
primitive sex cord of indifferent gonad | 2.50e-08 | 1 |
coelomic epithelium | 2.50e-08 | 1 |
left cardiac atrium | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.25e-10 | 3 |
leiomyoma | 2.25e-10 | 3 |
benign neoplasm | 5.45e-08 | 4 |